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  • 1
    In: Ecohydrology, Wiley, Vol. 12, No. 2 ( 2019-03)
    Abstract: We conducted an on‐site monitoring study involving seasonal collection of microbial mats samples from the Krčić spring located in the Dinaric karst in Croatia. This intermittent karst spring is characterized by oligotrophic conditions and extreme water regime fluctuations. Extreme conditions at the Krčić included summer drought followed by strong rains in the autumn as well as freezing ambient temperature during winter. By using two phylogenetic markers, 16S rRNA (total Bacteria) and internal transcribed spacer (ITS) region (Cyanobacteria), we aimed to detect the impact of intense seasonal fluctuations of environmental parameters in shaping (and/or selecting) the microbial mat community of the Krčić spring. Microbial mat community was found to harbour bacteria belonging to 11 different phyla with Cyanobacteria making the community core ( 〉 50%), followed by Alphaproteobacteria. The most abundant cyanobacterial genera included Microcoleus , Phormidium , and uncultured Antarctic cyanobacterium. In two mat samples, collected during conditions of low temperatures and strong bora wind (winter 2014) and during drought period (summer 2015), Cyanobacteria were diminished within the community. Under the extreme cold populations found to proliferate included Planctomycetes and candidate phylum TM6, found specifically in this sample. Members of the phyla Firmicutes were strictly found during the drought summer period followed by Cytophagia‐Fibrella , Polymorphobacter , Polaromonas , and Massilia . During the event of high water inflow following the drought, Cyanobacteria represented 90% of the community in which specific desiccant‐tolerant Chroococcidiopsis , Calothrix , and Pleurocapsa species appeared having mechanisms for quick recolonization of environments.
    Type of Medium: Online Resource
    ISSN: 1936-0584 , 1936-0592
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2019
    detail.hit.zdb_id: 2418105-5
    SSG: 12
    Location Call Number Limitation Availability
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  • 2
    In: Journal of Phycology, Wiley, Vol. 57, No. 1 ( 2021-02), p. 143-159
    Abstract: The paraphyletic diatom genus Nitzschia comprises over 1000 morphologically distinct pennate taxa, known from the benthos and plankton of freshwater, brackish, and marine environments. The principal diagnostic characters for delimitation of Nitzschia species include valve shape, the position and structure of the raphe, presence/absence and shape of the proximal raphe endings and terminal raphe fissures, areola structure, and specific morphometric features such as cell size, and stria and fibula density. In this study, we isolated 12 diatom strains into culture from samples collected at the surface or greater depths of the southeastern Adriatic Sea. Morphological analyses included LM, SEM, and TEM observations, which, along with specific morphometric features, allowed us to distinguish three new Nitzschia species. These findings were congruent with the results of phylogenetic analyses performed on nuclear‐encoded SSU (18S) rDNA and chloroplast‐encoded rbc L and psb C genes. One of the new species ( Nitzschia dalmatica sp. nov.) formed a lineage within a clade of Bacillariaceae containing members of the Nitzschia sect. Dubiae , which was sister to Psammodictyon . A second lineage was part of a novel clade that is significantly distinct from other Nitzschia species sequenced so far and includes Nitzschia adhaerens sp. nov. and N. cf. adhaerens . A further new species was found, Nitzschia inordinata sp. nov., which appeared as the sister group to the N. adhaerens clade and the conopeoid Nitzschia species in our phylogenetic trees. Our findings contribute to the overall diversity of genus Nitzschia , especially in identifying some deep branches within the Bacillariaceae, and highlight under‐scoring of this genus in marine plankton.
    Type of Medium: Online Resource
    ISSN: 0022-3646 , 1529-8817
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2021
    detail.hit.zdb_id: 281226-5
    detail.hit.zdb_id: 1478748-9
    SSG: 12
    Location Call Number Limitation Availability
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