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  • 1
    ISSN: 1432-1106
    Keywords: Key words Immunoadhesin ; Gene targeting ; Hippocampus ; Neural plasticity ; Relational learning ; Mouse
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract  Gene targeting using homologous recombination in embryonic stem (ES) cells offers unprecedented precision with which one may manipulate single genes and investigate the in vivo effects of defined mutations in the mouse. Geneticists argue that this technique abrogates the lack of highly specific pharmacological tools in the study of brain function and behavior. However, by now it has become clear that gene targeting has some limitations too. One problem is spatial and temporal specificity of the generated mutation, which may appear in multiple brain regions or even in other organs and may also be present throughout development, giving rise to complex, secondary phenotypical alterations. This may be a disadvantage in the functional analysis of a number of genes associated with learning and memory processes. For example, several proteins, including neurotrophins – cell-adhesion molecules – and protein kinases, that play a significant developmental role have recently been suggested to be also involved in neural and behavioral plasticity. Knocking out genes of such proteins may lead to developmental alterations or even embryonic lethality in the mouse, making it difficult to study their function in neural plasticity, learning, and memory. Therefore, alternative strategies to gene targeting may be needed. Here, we suggest a potentially useful in vivo strategy based on systemic application of immunoadhesins, genetically engineered fusion proteins possessing the Fc portion of the human IgG molecule and, for example, a binding domain of a receptor of interest. These proteins are stable in vivo and exhibit high binding specificity and affinity for the endogenous ligand of the receptor, but lack the ability to signal. Thus, if delivered to the brain, immunoadhesins may specifically block signalling of the receptor of interest. Using osmotic minipumps, the protein can be infused in a localized region of the brain for a specified period of time (days or weeks). Thus, the location and timing of delivery are controlled. Here, we present methodological details of this novel approach and argue that infusion of immunoadhesins will be useful for studying the role particular receptors play in behavioral and neural plasticity.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Health care analysis 4 (1996), S. 273-283 
    ISSN: 1573-3394
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Recent years have witnessed a growing interest in the measurement of health status. One of the most well-known health status instruments is the Sickness Impact Profile (SIP). This paper examines the nature, development and testing of the SIP (and its UK equivalent the FLP). The practical merits of these instruments are explained, and some cautionary remarks are offered about their limitations.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Chicester [u.a.] : Wiley-Blackwell
    Journal of Molecular Recognition 10 (1997), S. 182-187 
    ISSN: 0952-3499
    Keywords: NMR ; metabolism ; control ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: The techniques of NMR spectroscopy and molecular genetics have provided new and powerful approaches to studying the control and organisation of cellular metabolism in vivo. We review here our recent applications of these methodologies to the study of energy metabolism in yeast and mammalian cells. © 1997 John Wiley & Sons, Ltd.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Chicester [u.a.] : Wiley-Blackwell
    Journal of Molecular Recognition 6 (1993), S. 159-165 
    ISSN: 0952-3499
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Models of metabolic flux regulation are frequently based on an extrapolation of the kinetic properties of enzymes measured in vitro to the intact cell. Such an extrapolation assumes a detailed knowledge of the intracellular environment of these enzymes in terms of their free substates and effectors concentrations and possible interaction with other cellular macromolecules, which may modify their kinetic properties. These is a considerable incentive, therefore, to study the properties of enzymes directly in vivo. We have been using non-invasive NMR techniques, in conjunction with molecular genetic manipulation of enzyme levels, to study the kinetic properties of individual enzymes in vivo. We have also developed a novel strategy which has allowed us to monitor, by NMR, the ligand binding properties and mobilities of enzymes in the intact cell. This technique may also allow us to measured the diffusion coefficients of these proteins in the cell. These studies should give new insight into the properties of enzymes in vivo
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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  • 5
    Publication Date: 2014-05-29
    Description: Fossil assemblages of the Ordovician to Devonian successions of Japan suggest complex temporal, environmental and geographical controls on their biogeographical signature. Thus, limited similarity at the species-level between the trilobite, brachiopod and ostracod faunas of the South Kitakami, Hida-Gaien and Kurosegawa terranes in part reflects the sporadic stratigraphic distribution of shelly fauna within these terranes. As a result, and with the exception of corals and pan-tropical radiolarians, species-level similarities are greater with other regions of East Asia and Australia than amongst the Japanese terranes. The Silurian faunas of the South Kitakami Terrane have affinities with North America, Europe, Central Asia and Australia, but there is no overriding signature to support proximity either to South China or Gondwana. Notably, brachiopod and trilobite faunas of the Middle Devonian suggest strong connections with North China. Trilobite, coral and ostracod faunas of the Hida-Gaien Terrane show affinity, including at species level, with Siluro-Devonian faunas from westerly-situated palaeocontinents, especially those of Central Asian and European affinity, suggesting a continuation of the Central Asian Orogenic Belt, or of its associated lithofacies. Greater diversity of groups such as ostracods and trilobites in this terrane may signal closer links with continental shelf faunas of East Asia. The dominant biogeographical signature of the Kurosegawa Terrane is from corals and trilobites, suggesting links with the Siluro-Devonian of Central Asia, Australia and South China. The variable biogeographic signal of the Japanese faunas may reflect the lifestyles of organisms with different physiologies and larval dispersal mechanisms, as well as the relative incompleteness of the Japanese fossil record. The present state of knowledge of the faunas cautions against placing Japan in relative proximity to the North or South China plates, or of presenting the Japanese terranes as a unified island arc to the north of the South China Plate during the Early Palaeozoic.
    Print ISSN: 1038-4871
    Electronic ISSN: 1440-1738
    Topics: Geosciences
    Published by Wiley-Blackwell
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  • 6
    Publication Date: 2016-04-01
    Description: Land-use change is one of the biggest threats to biodiversity globally. The effects of land use on biodiversity manifest primarily at local scales which are not captured by the coarse spatial grain of current global land-use mapping. Assessments of land-use impacts on biodiversity across large spatial extents require data at a similar spatial grain to the ecological processes they are assessing. Here, we develop a method for statistically downscaling mapped land-use data that combines generalized additive modeling and constrained optimization. This method was applied to the 0.5° Land-use Harmonization data for the year 2005 to produce global 30″ (approx. 1 km 2 ) estimates of five land-use classes: primary habitat, secondary habitat, cropland, pasture, and urban. The original dataset was partitioned into 61 bio-realms (unique combinations of biome and biogeographical realm) and downscaled using relationships with fine-grained climate, land cover, landform, and anthropogenic influence layers. The downscaled land-use data were validated using the PREDICTS database and the geoWiki global cropland dataset. Application of the new method to all 61 bio-realms produced global fine-grained layers from the 2005 time step of the Land-use Harmonization dataset. Coarse-scaled proportions of land use estimated from these data compared well with those estimated in the original datasets (mean R 2 : 0.68 ± 0.19). Validation with the PREDICTS database showed the new downscaled land-use layers improved discrimination of all five classes at PREDICTS sites ( P  〈   0.0001 in all cases). Additional validation of the downscaled cropping layer with the geoWiki layer showed an R 2 improvement of 0.12 compared with the Land-use Harmonization data. The downscaling method presented here produced the first global land-use dataset at a spatial grain relevant to ecological processes that drive changes in biodiversity over space and time. Integrating these data with biodiversity measures will enable the reporting of land-use impacts on biodiversity at a finer resolution than previously possible. Furthermore, the general method presented here could be useful to others wishing to downscale similarly constrained coarse-resolution data for other environmental variables. Current global land-use data are at a coarse spatial grain which does not match the local ecological processes that they disrupt. Here, we present a new statistical downscaling method and apply this method to a global 0.5 degree land-use dataset. Using our method, we produce a global fine-grained land-use dataset at a spatial resolution more relevant to the local ecological processes that land-use practices disrupt.
    Electronic ISSN: 2045-7758
    Topics: Biology
    Published by Wiley-Blackwell
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  • 7
    Publication Date: 2016-07-13
    Description: This manuscript details investigations of a productive, mountain freshwater lake and examines the dynamic relationship between the chemical, stable isotope and microbial composition of lake-bed sediments with the geochemistry of the lake water column. A multi-disciplinary approach was used in order to better understand the lake water-sediment interactions including quantification and sequencing of microbial 16S rRNA genes in a sediment core as well as stable isotope analysis of C, S, N. One visit included the use of a pore water sampler to gain insight into the composition of dissolved solutes within the sediment matrix. Sediment cores showed a general decrease in total C with depth which included a decrease in the fraction of organic C combined with an increase in the fraction of inorganic C. One sediment core showed a maximum concentration of dissolved organic C, dissolved inorganic C and dissolved methane in pore water at the 4 cm depth which corresponded with a sharp increase in the abundance of 16S rRNA templates as a proxy for the microbial population size as well as the peak abundance of a sequence affiliated with a putative methanotroph. The isotopic separation between dissolved inorganic and dissolved organic carbon is consistent with largely aerobic microbial processes dominating the upper water column while anaerobic microbial activity dominates the sediment bed. Using sediment core carbon concentrations, predictions were made regarding the breakdown and return of stored carbon per year from this temperate climate lake with as much as 1.3 Gg C yr -1 being released in the form of CO 2 and CH 4 .
    Print ISSN: 0148-0227
    Topics: Biology , Geosciences
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  • 8
    Publication Date: 2012-06-08
    Description: Reliable projections of climate-change impacts on biodiversity are vital in formulating conservation and management strategies that best retain biodiversity into the future. While recent modelling has focussed largely on individual species, macroecology has the potential to add significant value to these efforts, by incorporating important community-level constraints and processes. Here we show how a new dynamic macroecological approach can project climate-change impacts collectively across all species in a diverse taxonomic group, overcoming shortfalls in our knowledge of biodiversity, while incorporating the key processes of dispersal and community assembly. Our approach applies a recently published technique ( Dynamic FOAM) to predict the present composition of every community, which form the initial conditions for a new metacommunity model (M-SET) that projects changes in composition over time, under specified climate and habitat scenarios. Applying this approach at fine resolution to plant biodiversity in Tasmania (2,051 species; 1,157,587 communities), we project high average turnover in community composition from 2010 to 2100 (mean Sorensen's dissimilarity = 0.71 (±7.0 x 10 -5 )), with major reductions in species richness (32.9 (±0.02) species lost per community) and no plant species benefitting from climate change in the long term. We also demonstrate how our modelling approach can identify habitat likely to be of high value for retaining rare and poorly reserved species under climate change. Our analyses highlight the potential value of this dynamic macroecological approach, that incorporates key ecological processes in projecting climate change impacts for all species simultaneously and uses simple macroecological inputs that can be derived even for highly diverse and poorly studied taxa.
    Print ISSN: 1354-1013
    Electronic ISSN: 1365-2486
    Topics: Biology , Energy, Environment Protection, Nuclear Power Engineering , Geography
    Published by Wiley-Blackwell
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