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  • 1
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    Schweizerbart
    In:  Archiv für Hydrobiologie, 84 . pp. 381-388.
    Publication Date: 2015-03-24
    Type: Article , PeerReviewed
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  • 2
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    Unknown
    Schweizerbart
    In:  Fundamental and Applied Limnology : Archiv für Hydrobiologie, 182 (2). pp. 135-159.
    Publication Date: 2019-04-04
    Description: The microbial diversity of five unconnected high altitude (≥ 3800 m a.s.l.) wetlands from the Chilean Altiplano was analyzed by a culture-independent approach, using 16 S rRNA gene sequences of different microbial groups. The wetlands (Chungara Lake, Parinacota wetland, Piacota Lake, Salar de Huasco and Salar de Ascotan) differed in terms of habitat type and physicochemical properties. The bacterial communities of these systems were dominated by Bacteroidetes (24-94 % of the clones) and Proteobacteria (Alpha, Beta, Gamma and Delta subgroups) with smaller contributions by the Firmicutes, Actinobacteria, Planctomycetes, Verrucomicrobia, Chloroflexi, Cyanobacteria, Acidobacteria, Deinococcus-Thermus and Candidate Division WS3. Fourteen phylotypes matching Alphaproteobacteria were part of the marine Roseobacter clade, representing new clusters of this group. Archaeal diversity was much lower than that seen for bacteria, and was dominated by Euryarchaeota; however Crenarchaeota were also present. Considering the large differences in microbial community composition between sites and samples, the presence of eleven phylotypes common to two or more habitats is highlighted. The frequent presence of new taxa in different phylogenetic groups in the altiplanic wetlands studied here revealed the unique characteristics of Bacteria and Archaea in these fragile Andean ecosystems.
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2019-04-04
    Description: Cyanobacterial community composition was studied along a salinity gradient from the saline Spring Fuliya towards the water column of Lake Kinneret. The samples included a gradient of salinities ranging from 4270 mg Cl L-1 (Saline Spring) to 239 mg Cl L-1 (Lake Kinneret). Denaturing gradient gel electrophoresis (DGGE) and cloning of the 16 S rRNA gene, as well as cloning and sequencing of the psbA gene, were used to characterize cyanobacterial community composition. Despite the differences in salinity, similar cyanobacterial communities were observed in the lake and the saline spring, the only exception being the highest salinity sample (4270 mg Cl L-1). Both, DGGE patterns and results of the clone libraries revealed the dominance of cyanobacteria with colonial Gloeocapsa and unicellular Synechococcus as the closest known cultured relatives, independently of the salinity. These results suggest that cyanobacterial populations inhabiting this freshwater lake and its saline sources can adapt to a wide range of salinities.
    Type: Article , PeerReviewed
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  • 4
    Publication Date: 2019-02-27
    Description: One important pathway of the nitrogen cycle in aquatic environments is the oxidation of ammonia to nitrite by ammonia-oxidizing bacteria (AOB). In this study the composition of AOB communities was compared between fresh (lakes Plusssee and Schöhsee) and brackish (Baltic Sea) water at two different levels: i) between environments and ii) within different depths in each environment. Changes in the community structure were studied by denaturing gradient gel electrophoresis (DGGE) and clone libraries of PCR products of 16S rRNA genes (rDNA) from AOB of the beta subclass of proteobacteria. Each environment displayed a particular DGGE band pattern. In Plusssee and the Baltic Sea, the differentiation of communities in epi- and metalimnion from those in hypolimnion coincided with a distinct stratification of the water column. In Schöhsee with an aerobic hypolimnion, the communities at all depths were similar. AOB communities in sediments were different from those in the water column. The composition of clone libraries showed the presence of specific Nitrosomonas and Nitrosospira-like sequences in each environment and habitat.
    Type: Article , PeerReviewed
    Format: text
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