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  • Accession number, genetics; amplicon sequencing; Angeles Alvarino; Area/locality; Bacteria; Bay of Biscay; CTD/Rosette; CTD1; CTD10; CTD11; CTD12; CTD13; CTD14; CTD15; CTD2; CTD3; CTD4; CTD5; CTD6; CTD7; CTD8; CTD9; CTD-RO; Date/Time of event; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; DEPTH, water; DR10; DR15; DR4; DR7; DR9; Dredge, rock; DRG_R; Event label; flow cytometry; Flow cytometry; Geology, comment; Latitude of event; Longitude of event; Measurement conducted; Method/Device of event; Phytoplankton; population genetics; Porifera; Sample code/label; Sample ID; single-nucleotide polymorphisms (SNPs); SponGES; SponGES_0617; SPONGES_0617_04-DR4; SPONGES_0617_07-CTD1; SPONGES_0617_12-CTD2; SPONGES_0617_13-CTD3; SPONGES_0617_15-DR7; SPONGES_0617_18-CTD4; SPONGES_0617_19-CTD5; SPONGES_0617_23-DR9; SPONGES_0617_24-CTD6; SPONGES_0617_27-CTD7; SPONGES_0617_28-DR10; SPONGES_0617_29-CTD8; SPONGES_0617_40-CTD9; SPONGES_0617_42-CTD10; SPONGES_0617_46-CTD11; SPONGES_0617_49-CTD12; SPONGES_0617_55-CTD13; SPONGES_0617_58-CTD14; SPONGES_0617_60-DR15; SPONGES_0617_61-CTD15  (1)
  • Climate - Biogeochemistry Interactions in the Tropical Ocean; File content; File format; File name; File size; Model; Sea-turtle_model; SFB754; Uniform resource locator/link to model result file  (1)
  • Indian Ocean
  • PANGAEA  (2)
Document type
Keywords
Years
  • 1
    Publication Date: 2023-03-25
    Description: Connectivity is a fundamental process driving the persistence of marine populations and their adaptation potential in response to environmental change. In this study, we analysed the population genetics of two morphologically highly similar deep-sea sponge clades (Phakellia hirondellei and the 'Topsentia-and-Petromica (TaP)' clade) at three locations in the Cantabrian Sea. Sponge taxonomy was assessed by spicule analyses, as well as by 18S sequencing and COI sequencing. The corresponding host microbiome was analysed by 16S rRNA gene sequencing. In addition we set up an oceanographic modelling framework, for which we used seawater flow cytometry data (derived from bottom depths of CTD casts) as ground-truthing data.
    Keywords: Accession number, genetics; amplicon sequencing; Angeles Alvarino; Area/locality; Bacteria; Bay of Biscay; CTD/Rosette; CTD1; CTD10; CTD11; CTD12; CTD13; CTD14; CTD15; CTD2; CTD3; CTD4; CTD5; CTD6; CTD7; CTD8; CTD9; CTD-RO; Date/Time of event; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; DEPTH, water; DR10; DR15; DR4; DR7; DR9; Dredge, rock; DRG_R; Event label; flow cytometry; Flow cytometry; Geology, comment; Latitude of event; Longitude of event; Measurement conducted; Method/Device of event; Phytoplankton; population genetics; Porifera; Sample code/label; Sample ID; single-nucleotide polymorphisms (SNPs); SponGES; SponGES_0617; SPONGES_0617_04-DR4; SPONGES_0617_07-CTD1; SPONGES_0617_12-CTD2; SPONGES_0617_13-CTD3; SPONGES_0617_15-DR7; SPONGES_0617_18-CTD4; SPONGES_0617_19-CTD5; SPONGES_0617_23-DR9; SPONGES_0617_24-CTD6; SPONGES_0617_27-CTD7; SPONGES_0617_28-DR10; SPONGES_0617_29-CTD8; SPONGES_0617_40-CTD9; SPONGES_0617_42-CTD10; SPONGES_0617_46-CTD11; SPONGES_0617_49-CTD12; SPONGES_0617_55-CTD13; SPONGES_0617_58-CTD14; SPONGES_0617_60-DR15; SPONGES_0617_61-CTD15
    Type: Dataset
    Format: text/tab-separated-values, 550 data points
    Location Call Number Limitation Availability
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  • 2
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    Unknown
    PANGAEA
    In:  Supplement to: Scott, Rebecca; Biastoch, Arne; Agamboue, Pierre D; Bayer, Till; Boussamba, Francois L; Formia, Angela; Godley, Brendan J; Mabert, Brice D K; Manfoumbi, Jean C; Schwarzkopf, Franziska; Sounguet, Guy-Philippe; Wagner, Patrick; Witt, Matthew J (2017): Spatio-temporal variation in ocean current-driven hatchling dispersion: Implications for the world's largest leatherback sea turtle nesting region. Diversity and Distributions, https://doi.org/10.1111/ddi.12554
    Publication Date: 2023-10-28
    Description: This data set describes the location of virtual floats representing turtle hatchlings throughout 60 modeled years. Floats were constrained to remain within depths of 0-6 m due to the positive buoyancy of hatchlings. Floats were first assigned to one of 20,000 random release locations within a large release area 125-400 km offshore from nesting beaches throughout the Republic/Democratic Republic of the Congo, Gabon and Equatorial Guinea spanning latitudes of c. 6°S to 3.5°N. For each month over the 4-month long hatching season (January-April), each of the 20,000 floats was assigned a random release day and drift simulations ran every year during the period 1960-2007 resulting in drift trajectories of approx. 4 million virtual floats. See Scott et al., 2017, Spatio-temporal variation in ocean current-driven hatchling dispersion: Implications for the world's largest leatherback sea turtle nesting region. Diversity Distrib, http://dx.doi.org/10.1111%2Fddi.12554 for details as to the model parameters. Each data set consists of data on the float ID (number 1,2,3 etc..) and its trajectory attributes (latitude/longitude) at each time step. Data are also provided on the temperature, salinity and density of the float at its respective position/time step. Data sets are sorted by float release date, and contain one data file for each year. Each data file has 11 columns, which contain the following data: float id, longitude, latitude, depth, time step, temperature, salinity, density, no time steps since start, distance to start point, bearing from start point
    Keywords: Climate - Biogeochemistry Interactions in the Tropical Ocean; File content; File format; File name; File size; Model; Sea-turtle_model; SFB754; Uniform resource locator/link to model result file
    Type: Dataset
    Format: text/tab-separated-values, 60 data points
    Location Call Number Limitation Availability
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