Description: A new Earth system model, the Flexible Ocean and Climate Infrastructure (FOCI), is introduced. A first version of FOCI consists of a global high-top atmosphere (ECHAM6.3) and an ocean model (NEMO3.6) as well as sea ice (LIM2) and land surface model components (JSBACH), which are coupled through the OASIS3-MCT software package. FOCI includes a number of optional modules which can be activated depending on the scientific question of interest. In the atmosphere, interactive stratospheric chemistry can be used (ECHAM6-HAMMOZ) to study, for example, the effects of the ozone hole on the climate system. In the ocean, a biogeochemistry model (MOPS) is available to study the global carbon cycle. A unique feature of FOCI is the ability to explicitly resolve mesoscale ocean eddies in specific regions. This is realized in the ocean through nesting; first examples for the Agulhas Current and the Gulf Stream systems are described here. FOCI therefore bridges the gap between coarse-resolution climate models and global high-resolution weather prediction and ocean-only models. It allows to study the evolution of the climate system on regional and seasonal to (multi-) decadal scales. The development of FOCI resulted from a combination of the long-standing expertise in ocean and climate modeling in several research units and divisions at GEOMAR. FOCI will thus be used to complement and interpret long-term observations in the Atlantic, enhance the process understanding of the role of mesoscale oceanic eddies for large-scale oceanic and atmospheric circulation patterns, study feedback mechanisms with stratospheric processes, estimate future ocean acidification, improve the simulation of the Atlantic Meridional Overturning Circulation changes and their influence on climate, ocean chemistry and biology. In this paper we present both the scientific vision for the development of FOCI as well as some technical details. This includes a first validation of the different model components using several configurations of FOCI. Results show that the model in its basic configuration runs stably under pre-industrial control as well as under historical forcing, and produces a mean climate and variability which compares well with observations, reanalysis products and other climate models. The nested configurations reduce some long-standing biases in climate models and are an important step forward to include the atmospheric response in multi-decadal eddy-rich configurations.

Description: In highly fragmented and relatively stable cold-seep ecosystems, species are expected to exhibit high migration rates and long-distance dispersal of long-lived pelagic larvae to maintain genetic integrity over their range. Accordingly, several species inhabiting cold seeps are widely distributed across the whole Atlantic Ocean, with low genetic divergence between metapopulations on both sides of the Atlantic Equatorial Belt (AEB, i.e. Barbados and African/European margins). Two hypotheses may explain such patterns: (i) the occurrence of present-day gene flow or (ii) incomplete lineage sorting due to large population sizes and low mutation rates. Here, we evaluated the first hypothesis using the cold seep mussels Gigantidas childressi, G. mauritanicus, Bathymodiolus heckerae and B. boomerang. We combined COI barcoding of 763 individuals with VIKING20X larval dispersal modelling at a large spatial scale not previously investigated. Population genetics supported the parallel evolution of Gigantidas and Bathymodiolus genera in the Atlantic Ocean and the occurrence of a 1-3 Million-year-old vicariance effect that isolated populations across the Caribbean Sea. Both population genetics and larval dispersal modelling suggested that contemporary gene flow and larval exchanges are possible across the AEB and the Caribbean Sea, although probably rare. When occurring, larval flow was eastward (AEB - only for B. boomerang) or northward (Caribbean Sea - only for G. mauritanicus). Caution is nevertheless required since we focused on only one mitochondrial gene, which may underestimate gene flow if a genetic barrier exists. Non-negligible genetic differentiation occurred between Barbados and African populations, so we could not discount the incomplete lineage sorting hypothesis. Larval dispersal modelling simulations supported the genetic findings along the American coast with high amounts of larval flow between the Gulf of Mexico (GoM) and the US Atlantic Margin, although the Blake Ridge population of B. heckerae appeared genetically differentiated. Overall, our results suggest that additional studies using nuclear genetic markers and population genomics approaches are needed to clarify the evolutionary history of the Atlantic bathymodioline mussels and to distinguish between ongoing and past processes.

Description: Observations of the eastern subpolar North Atlantic in the 2010s show exceptional freshening and cooling of the upper ocean, peaking in 2016 with the lowest salinities recorded for 120 years. Published theories for the mechanisms driving the freshening include: reduced transport of saltier, warmer surface waters northwards from the subtropics associated with reduced meridional overturning; shifts in the pathways of fresher, cooler surface water from the Labrador Sea driven by changing patterns of wind stress; and the eastward expansion of the subpolar gyre. Using output from a high-resolution hindcast model simulation, we propose that the primary cause of the exceptional freshening and cooling is reduced surface heat loss in the Labrador Sea. Tracking virtual fluid particles in the model backwards from the eastern subpolar North Atlantic between 1990 and 2020 shows the major cause of the freshening and cooling to be an increased outflow of relatively fresh and cold surface waters from the Labrador Sea; with a minor contribution from reduced transport of warmer, saltier surface water northward from the subtropics. The cooling, but not the freshening, produced by these changing proportions of waters of subpolar and subtropical origin is mitigated by reduced along-track heat loss to the atmosphere in the North Atlantic Current. We analyse modelled boundary exchanges and water mass transformation in the Labrador Sea to show that since 2000, while inflows of lighter surface waters remain steady, the increasing output of these waters is due to reduced surface heat loss in the Labrador Sea beginning in the early 2000s. Tracking particles further upstream reveals that the primary source of the increased volume of lighter water transported out of the Labrador Sea is increased recirculation of water, and therefore longer residence times, in the upper 500–1000 m of the subpolar gyre.

Description: In this study, we use a joint observation-model approachto investigate the mixed-layer heat and salt annual mean as well as seasonalbudgets in the eastern tropical Atlantic. The regional PREFCLIM (PREFACE Climatology)observational climatology provides the budget terms with a relatively lowspatial and temporal resolution compared to the online NEMO (Nucleus for European Modelingof the Ocean; Madec, G., 2014) model, and thisis later resampled as in PREFCLIM climatology. In addition, advectionterms are recomputed offline from the model as PREFCLIM gridded advectioncomputation. In the Senegal, Angola, and Benguela regions, the seasonal cycle ofmixed-layer temperature is mainly governed by surface heat fluxes; however,it is essentially driven by vertical heat diffusion in the equatorial region.The seasonal cycle of mixed-layer salinity is largely controlled byfreshwater flux in the Senegal and Benguela regions; however, it follows thevariability of zonal and meridional salt advection in the equatorial and Angolaregions, respectively. Our results show that the time-averaged spatialdistribution of NEMO offline heat and salt advection terms compares much betterto PREFCLIM horizontal advection terms than the online heat and salt advectionterms. However, the seasonal cycle of horizontal advection in selectedregions shows that NEMO offline terms do not always compare well withPREFCLIM, sometimes less than online terms. Despite this difference, theseresults suggest the important role of small-scale variability in mixed-layerheat and salt budgets.

Description: The upper wind-driven circulation in the tropical Atlantic Ocean plays a key role in the basin-wide distribution of water mass properties and affects the transport of heat, freshwater, and biogeochemical tracers such as oxygen or nutrients. It is crucial to improve our understanding of its long-term behaviour, which largely relies on model simulations and applied forcing due to sparse observational data coverage, especially before the mid-2000s. Here, we apply two different forcing products, the Coordinated Ocean-ice Reference Experiments (CORE) v2 and the Japanese 55-year Reanalysis (JRA55-do) surface dataset, to a high-resolution ocean model. Where possible, we compare the simulated results to long-term observations. We find large discrepancies between the two simulations regarding the wind and current field. In the CORE simulation, strong, large-scale wind stress curl amplitudes above the upwelling regions of the eastern tropical North Atlantic seem to cause an overestimation of the mean and seasonal variability in the eastward subsurface current just north of the Equator. The wind stress curl of JRA55-do forcing shows much finer structures, and the JRA55-do simulation is in better agreement with the mean and intraseasonal fluctuations in the subsurface current found in observations. The northern branch of the South Equatorial Current flows westward at the surface just north of the Equator. On interannual to decadal timescales, it shows a high correlation of R=0.9 with the zonal wind stress in the CORE simulation but only a weak correlation of R=0.35 in the JRA55-do simulation. We also identify similarities between the two simulations. The strength of the eastward-flowing North Equatorial Counter Current located between 3 and 10° N covaries with the strength of the meridional wind stress just north of the Equator on interannual to decadal timescales in the two simulations. Both simulations present a comparable mean, seasonal cycle and trend of the eastward off-equatorial subsurface current south of the Equator but underestimate the current strength by half compared to observations. In both simulations, the eastward-flowing Equatorial Undercurrent weakened between 1990 and 2009. In the JRA simulation, which covers the modern period of observations, the Equatorial Undercurrent strengthened again between 2008 to 2018, which agrees with observations, although the simulation underestimates the strengthening by over a third. We propose that long-term observations, once they have reached a critical length, need to be used to test the quality of wind-driven simulations. This study presents one step in this direction.