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  • Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu  (23)
  • Annual Reviews  (2)
  • Copernicus Publications on behalf of the European Geosciences Union  (1)
  • 1
    Electronic Resource
    Electronic Resource
    Palo Alto, Calif. : Annual Reviews
    Annual Review of Ecology, Evolution, and Systematics 32 (2001), S. 51-93 
    ISSN: 0066-4162
    Source: Annual Reviews Electronic Back Volume Collection 1932-2001ff
    Topics: Biology
    Notes: Abstract Most of our knowledge of biodiversity and its causes in the deep-sea benthos derives from regional-scale sampling studies of the macrofauna. Improved sampling methods and the expansion of investigations into a wide variety of habitats have revolutionized our understanding of the deep sea. Local species diversity shows clear geographic variation on spatial scales of 100-1000 km. Recent sampling programs have revealed unexpected complexity in community structure at the landscape level that is associated with large-scale oceanographic processes and their environmental consequences. We review the relationships between variation in local species diversity and the regional-scale phenomena of boundary constraints, gradients of productivity, sediment heterogeneity, oxygen availability, hydrodynamic regimes, and catastrophic physical disturbance. We present a conceptual model of how these interdependent environmental factors shape regional-scale variation in local diversity. Local communities in the deep sea may be composed of species that exist as metapopulations whose regional distribution depends on a balance among global-scale, landscape-scale, and small-scale dynamics. Environmental gradients may form geographic patterns of diversity by influencing local processes such as predation, resource partitioning, competitive exclusion, and facilitation that determine species coexistence. The measurement of deep-sea species diversity remains a vital issue in comparing geographic patterns and evaluating their potential causes. Recent assessments of diversity using species accumulation curves with randomly pooled samples confirm the often-disputed claim that the deep sea supports higher diversity than the continental shelf. However, more intensive quantitative sampling is required to fully characterize the diversity of deep-sea sediments, the most extensive habitat on Earth. Once considered to be constant, spatially uniform, and isolated, deep-sea sediments are now recognized as a dynamic, richly textured environment that is inextricably linked to the global biosphere. Regional studies of the last two decades provide the empirical background necessary to formulate and test specific hypotheses of causality by controlled sampling designs and experimental approaches.
    Type of Medium: Electronic Resource
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  • 2
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-25
    Description: Dataset: Experimental seawater chemistry
    Description: Experimental seawater chemical properties for larval mussel shell study from SIO, UCSD from 2012 and 2013. (OA_Proxies project) For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/522939
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1401349
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 3
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-25
    Description: Dataset: Mussel shell trace element ratios
    Description: Larval mussel shell composition under high and low pH and O2 from SIO, UCSD from 2012 and 2013. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/521670
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1041062
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2022-11-09
    Description: Dataset: Luminoxyscape environmental
    Description: In this dataset, we analyzed daytime casts (09:00-16:00) of both discrete bottle data and continuous CTD casts from CalCOFI stations restricted to an area from La Jolla, California to Point Conception and 215 km maximum offshore. This dataset has combined bottle and CTD casts to represent the date range 1984-2019. We used the oxygen and irradiance measurements to determine the visual luminoxyscape for each of the larval species. This range was bounded by the oxygen (partial pressure) where the pO2 would permit 50% minimum retinal function (V50; 13, 7.2, 10.2, and 6.8 kPa for larvae of 'Doryteuthis opalescens', 'Octopus bimaculatus', 'Metacarcinus gracilis', and 'Pleuroncodes planipes', respectively), and where there is sufficient irradiance for a visual response (0.0311 µmol photons m-2 s-1) for each species. Additionally, oxygen limits for metabolism were used to determine the depth of occurrence of the Pcrit (the oxygen below which the animal cannot maintain a constant metabolic rate). The depths of occurrence for metabolic limits were determined for larvae of 'D. opalescens' and 'O. bimaculatus'. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/860397
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1829623
    Description: 2022-12-31
    Keywords: Vision ; Marine invertebrate ; Larvae ; Crustacean ; Cephalopod
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2022-11-09
    Description: Dataset: Luminoxyscape maximum depth
    Description: In this dataset, the maximum depths of the visual luminoxyscape for four species of marine invertebrate larvae were recorded. Data in this study are from CalCOFI stations restricted to an area from La Jolla, California to Point Conception and 215 kilometers maximum offshore (Station 60). We analyzed daytime casts (09:00-16:00) of both discrete bottle data and continuous CTD casts to represent the date range of 1984-2019 and used the oxygen and irradiance measurements to determine the visual luminoxyscape for each of the larval species. This range was bounded by the oxygen (partial pressure) where the pO2 would permit 50% minimum retinal function (V50; 13, 7.2, 10.2, and 6.8 kPa for larvae of 'Doryteuthis opalescens', 'Octopus bimaculatus', 'Metacarcinus gracilis', and 'Pleuroncodes planipes', respectively), and where there is sufficient irradiance for a visual response (0.0311 µmol photons m-2 s-1) for each species. Additionally, oxygen limits for metabolism were used to determine the depth of occurrence of the Pcrit (the oxygen below which the animal cannot maintain a constant metabolic rate). The depths of occurrence for metabolic limits were determined for larvae of 'D. opalescens' and 'O. bimaculatus'. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/859867
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1829623
    Keywords: Vision ; Marine invertebrate ; Larvae ; Crustacean ; Cephalopod
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 6
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Oxygen Metrics
    Description: Oxygen metrics for retinal function in marine invertebrate larvae determined with electroretinograms For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/779425
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1829623
    Keywords: Electrophysiology ; Hypoxia ; Marine invertebrate ; Oxygen ; Vision
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 7
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: AT37-13 Push Core Sampling Locations
    Description: Locations of sediment push cores collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017 For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/750284
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1634172
    Keywords: Methane seep ; Deep sea ; Macrofauna ; Push core ; Alvin ; Costa Rica ; Continental slope ; Tropical Pacific ; Benthic
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 8
    Publication Date: 2022-10-31
    Description: Dataset: AT37-13 Macrofauna Community Matrix
    Description: Matrix of taxon (columns) by sample (rows) for sediment push cores collected by HOV Alvin during R/V Atlantis cruise AT37-13 in the Pacific margin of Costa Rica from May to June 2017 For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/750091
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1634172
    Keywords: Methane seep ; Deep sea ; Macrofauna ; Push core ; Alvin ; Costa Rica ; Continental slope ; Tropical Pacific ; Benthic
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 9
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: AT37-13 Hard Substrata Sampling Locations
    Description: Locations of hard substrata collected during R/V Atlantis cruise AT37-13 in the Pacific Ocean off Costa Rica from May to June 2017 For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/750308
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1634172
    Keywords: Methane seep ; Deep sea ; Macrofauna ; Alvin ; Costa Rica ; Continental slope ; Tropical Pacific ; D13C ; D15N ; Hard substrate
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 10
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Experiment Metrics
    Description: Experiment Details for invertebrate larvae electrophysiology For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/779387
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1829623
    Keywords: Electrophysiology ; Hypoxia ; Marine invertebrate ; Oxygen ; Vision
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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