In:
Journal of Clinical Microbiology, American Society for Microbiology, Vol. 38, No. 11 ( 2000-11), p. 3953-3959
Abstract:
Data from four recent studies (S. H. Goh et al., J. Clin. Microbiol. 36:2164–2166, 1998; S. H. Goh et al., J. Clin. Microbiol. 34:818–823, 1996; S. H. Goh et al., J. Clin. Microbiol. 35:3116–3121, 1997; A. Y. C. Kwok et al., Int. J. Syst. Bacteriol. 49:1181–1192, 1999) suggest that an approximately 600-bp region of the chaperonin 60 (Cpn60) gene, amplified by PCR with a single pair of degenerate primers, has utility as a potentially universal target for bacterial identification (ID). This Cpn60 gene ID method correctly identified isolates representative of numerous staphylococcal species and Streptococcus iniae , a human and animal pathogen. We report herein that this method enabled us to distinguish clearly between 17 Enterococcus species ( Enterococcus asini , Enterococcus rattus , Enterococcus dispar , Enterococcus gallinarum , Enterococcus hirae , Enterococcus durans , Enterococcus cecorum , Enterococcus faecalis , Enterococcus mundtii , Enterococcus casseliflavus , Enterococcus faecium , Enterococcus malodoratus , Enterococcus raffinosus , Enterococcus avium , Enterococcus pseudoavium , Enterococcus new sp. strain Facklam, and Enterococcus saccharolyticus ), and Vagococcus fluvialis , Lactococcus lactis , and Lactococcus garvieae . From 123 blind-tested samples, only two discrepancies were observed between the Facklam and Collins phenotyping method (R. R. Facklam and M. D. Collins, J. Clin. Microbiol. 27:731–734, 1989) and the Cpn60 ID method. In each case, the discrepancies were resolved in favor of the Cpn60 ID method. The species distributions of the 123 blind-tested isolates were Enterococcus new sp. strain Facklam (ATCC 700913), 3; E. asini , 1; E. rattus , 4; E. dispar , 2; E. gallinarum , 20; E. hirae , 9; E. durans , 9; E. faecalis , 12; E. mundtii , 3; E. casseliflavus , 8; E. faecium , 25; E. malodoratus , 3; E. raffinosus , 8; E. avium , 4; E. pseudoavium , 1; an unknown Enterococcus clinical isolate, sp. strain R871; Vagococcus fluvialis , 4; Lactococcus garvieae , 3; Lactococcus lactis , 3; Leuconostoc sp., 1; and Pediococcus sp., 1. The Cpn60 gene ID method, coupled with reverse checkerboard hybridization, is an effective method for the identification of Enterococcus and related organisms.
Type of Medium:
Online Resource
ISSN:
0095-1137
,
1098-660X
DOI:
10.1128/JCM.38.11.3953-3959.2000
Language:
English
Publisher:
American Society for Microbiology
Publication Date:
2000
detail.hit.zdb_id:
1498353-9
SSG:
12
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