Description: A nodule-shaped microbial mat was found subsurface in sediments of a gas seep in the anoxic Black Sea. This mat was dominated by ANME-1 archaea and consumed methane and sulfate simultaneously. We propose that such subsurface mats represent the initial stage of previously investigated microbial reefs.

Description: In this study we investigated by using 16S rRNA-based methods the distribution and biomass of archaea in samples from (i) sediments above outcropping methane hydrate at Hydrate Ridge (Cascadia margin off Oregon) and (ii) massive microbial mats enclosing carbonate reefs (Crimea area, Black Sea). The archaeal diversity was low in both locations; there were only four (Hydrate Ridge) and five (Black Sea) different phylogenetic clusters of sequences, most of which belonged to the methanotrophic archaea (ANME). ANME group 2 (ANME-2) sequences were the most abundant and diverse sequences at Hydrate Ridge, whereas ANME-1 sequences dominated the Black Sea mats. Other seep-specific sequences belonged to the newly defined group ANME-3 (related to Methanococcoides spp.) and to the Crenarchaeota of marine benthic group B. Quantitative analysis of the samples by fluorescence in situ hybridization (FISH) showed that ANME-1 and ANME-2 co-occurred at the cold seep sites investigated. At Hydrate Ridge the surface sediments were dominated by aggregates consisting of ANME-2 and members of the Desulfosarcina-Desulfococcus branch (DSS) (ANME-2/DSS aggregates), which accounted for 〉90% of the total cell biomass. The numbers of ANME-1 cells increased strongly with depth; these cells accounted 1% of all single cells at the surface and more than 30% of all single cells (5% of the total cells) in 7- to 10-cm sediment horizons that were directly above layers of gas hydrate. In the Black Sea microbial mats ANME-1 accounted for about 50% of all cells. ANME-2/DSS aggregates occurred in microenvironments within the mat but accounted for only 1% of the total cells. FISH probes for the ANME-2a and ANME-2c subclusters were designed based on a comparative 16S rRNA analysis. In Hydrate Ridge sediments ANME-2a/DSS and ANME-2c/DSS aggregates differed significantly in morphology and abundance. The relative abundance values for these subgroups were remarkably different at Beggiatoa sites (80% ANME-2a, 20% ANME-2c) and Calyptogena sites (20% ANME-2a, 80% ANME-2c), indicating that there was preferential selection of the groups in the two habitats. These variations in the distribution, diversity, and morphology of methanotrophic consortia are discussed with respect to the presence of microbial ecotypes, niche formation, and biogeography.

Description: The zone of continental margins is most important for the ocean’s productivity and nutrient budget and connects the flow of material from terrestrial environments to the deep-sea. Microbial processes are an important “filter” in this exchange between sediments and ocean interior. As a consequence of the variety of habitats and special environmental conditions at continental margins an enormous diversity of microbial processes and microbial life forms is found. The only definite limit to microbial life in sedimentary systems of continental margins appears to be high temperatures in the interior earth or in fluids rising from the interior. Many of the catalytic capabilities which microorganisms possess are still only incompletely explored and appear to continuously expand as new organisms are discovered. Recent discoveries at continental margins such as the microbial life in the deep sub-seafloor, microbial utilization of hydrate deposits, highly specialized microbial symbioses and the involvement of microbial processes in the formation of carbonate mounds have extended our understanding of the Earth’s bio- and geosphere dramatically. The aim of this paper is to identify important scientific issues for future research on microbial life in sedimentary environments of continental margins.

Description: Tommeliten is a prominent methane seep area in the Central North Sea. Previous surveys revealed shallow gas-bearing sediments and methane gas ebullition into the water column. In this study, the in situ methane flux at Tommeliten is re-assessed and the potential methane transport to the atmosphere is discussed, with regards to the hydrographic setting and gas bubble modeling. We have compiled previous data, acquired new video and acoustic evidence of gas bubble release, and have measured the methane concentration, and its C-isotopic composition in the water column. Parametric subbottom sonar data reveal the three-dimensional extent of shallow gas and morphologic features relevant for gas migration. Five methane ebullition areas are identified and the main seepage area appears to be 21 times larger than previously estimated. Our video, hydroacoustic, subbottom, and chemical data suggest that 1.5106 mol CH4/yr (26 tons CH4/yr) of methane gas is being released from the seepage area of Tommeliten. Methane concentration profiles in the vicinity of the gas seeps show values of up to 268 nM (100 times background) close to the seafloor. A decrease in d13C-CH4 values at 40 m water depth indicates an unknown additional biogenic methane source within the well oxygenated thermocline between 30 and 40 m water depth. Numerical modeling of the methane bubbles due to their migration and dissolution was performed to estimate the bubble-derived vertical methane transport, the fate of this methane in the water column, and finally the flux to the atmosphere. Modeling indicates that less than 4% of the gas initially released at the seafloor is transported via bubbles into the mixed layer and, ultimately, to the atmosphere. However, because of the strong seasonality of mixing in the North Sea, this flux is expected to increase as mixing increases, and almost all of the methane released at the seafloor could be transferred into the atmosphere in the stormy fall and winter time.

Description: The zone of continental margins is most important for the ocean’s productivity and nutrient budget and connects the flow of material from terrestrial environments to the deep-sea. Microbial processes are an important “filter” in this exchange between sediments and ocean interior. As a consequence of the variety of habitats and special environmental conditions at continental margins an enormous diversity of microbial processes and microbial life forms is found. The only definite limit to microbial life in sedimentary systems of continental margins appears to be high temperatures in the interior earth or in fluids rising from the interior. Many of the catalytic capabilities which microorganisms possess are still only incompletely explored and appear to continuously expand as new organisms are discovered. Recent discoveries at continental margins such as the microbial life in the deep sub-seafloor, microbial utilization of hydrate deposits, highly specialized microbial symbioses and the involvement of microbial processes in the formation of carbonate mounds have extended our understanding of the Earth’s bio- and geosphere dramatically. The aim of this paper is to identify important scientific issues for future research on microbial life in sedimentary environments of continental margins.

Description: Gravity driven mass-flow deposits proven by sedimentary and digital echosounder data are indicative for prevailing dynamic sedimentary conditions along the continental margin of the western Argentine Basin. In this study we present geochemical data from a total of 23 gravity cores. Pore-water SO4 is generally depleted within a few meters below the sediment surface by anaerobic oxidation of methane (AOM). The different shapes of SO4 profiles (concave, kink- and s-type) can be consistently explained by sedimentary slides possibly in combination with changes in the CH4 flux from below, thus, mostly representing transient pore-water conditions. Since slides may keep their original sedimentary signature, a combined analysis and numerical modeling of geochemical, physical properties, and hydro acoustic data could be applied in order to reconstruct the sedimentary history. We present first order estimates of the dating of sedimentary events for an area where conventional stratigraphic methods failed to this day. The results of the investigated sites suggest that present day conditions are the result of events that occurred decades to thousands of years ago and promote a persisting mass transport from the shelf into the deep-sea, depositing high amounts of reactive compounds. The high abundance of reactive iron phases in this region maintains low hydrogen sulfide levels in the sediments by a nearly quantitative precipitation of all reduced sulfate by AOM. For the total region we estimate a SO4 (or CH4) flux of 6.6 × 1010 moles per year into the zone of AOM. Projected to the global continental slope and rise area, this may sum up to about 2.6 × 1012 moles per year. Provided that the sulfur is completely fixed in the sediments it is about twice the global value of the recent global sulfur burial in marine sediments of 1.2 × 1012 moles per year as previously estimated. Thus, AOM obviously contributes very significantly to the regulation of global sulfur reservoirs, which is hitherto not sufficiently recognized. This finding may have implications for global geochemical models, as sulfur burial is an important control factor in the development of atmospheric oxygen levels over time.