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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Microbial ecology 9 (1983), S. 77-77 
    ISSN: 1432-184X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Microbial ecology 5 (1979), S. 215-223 
    ISSN: 1432-184X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Scanning electron microscopic (SEM) observations of naturally and artificially diseased corals reveal that the disease is characterized by a filamentous matrix of cyanobacterial andBeggiatoa filaments. Spiral bacteria are commonly embedded in the matrix. The artificial disease is not manifested as the characteristic “black line disease” and does not contain filaments of cyanobacteria. This suggests that cyanobacteria are necessary for the black line phenomenon. The colorless, sulfide-oxidizing bacteriumBeggiatoa, however, is always associated with the disease.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Microbial ecology 6 (1980), S. 185-187 
    ISSN: 1432-184X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 37 (2010): L22606, doi:10.1029/2010GL045448.
    Description: Drifting cylindrical traps and the flux proxy 234Th indicate more than an order of magnitude higher sinking fluxes of particulate carbon and 234Th in January 2009 than measured by a time-series conical trap used regularly on the shelf of the west Antarctic Peninsula (WAP). The higher fluxes measured in this study have several implications for our understanding of the WAP ecosystem. Larger sinking fluxes result in a revised export efficiency of at least 10% (C flux/net primary production) and a requisite lower regeneration efficiency in surface waters. High fluxes also result in a large supply of sinking organic matter to support subsurface and benthic food webs on the continental shelf. These new findings call into question the magnitude of seasonal and interannual variability in particle flux and reaffirm the difficulty of using moored conical traps as a quantitative flux collector in shallow waters.
    Description: Funding was provided by the WHOI Rinehart Access to the Sea program, the WHOI Coastal Oceans Institute, WHOI Academic Programs Office, and most significantly, from the NSF Office of Polar Programs for the PAL‐LTER (OPP 0823101), FOODBANCS and WAP Flux projects (OPP 0838866).
    Keywords: Particle export ; Sediment trap ; Thorium-234
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 5
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 117 (2012): G03019, doi:10.1029/2011JG001830.
    Description: The upper ocean primary production measurements from the Hawaii Ocean Time series (HOT) at Station ALOHA in the North Pacific Subtropical Gyre showed substantial variability over the last two decades. The annual average primary production varied within a limited range over 1991–1998, significantly increased in 1999–2000 and then gradually decreased afterwards. This variability was investigated using a one-dimensional ecosystem model. The long-term HOT observations were used to constrain the model by prescribing physical forcings and lower boundary conditions and optimizing the model parameters against data using data assimilation. The model reproduced the general interannual pattern in the observed primary production, and mesoscale variability in vertical velocity was identified as a major contributing factor to the interannual variability in the simulation. Several strong upwelling events occurred in 1999, which brought up nitrate at rates several times higher than other years and elevated the model primary production. Our model results suggested a hypothesis for the observed interannual variability pattern of primary production at Station ALOHA: Part of the upwelled nitrate input in 1999 was converted to and accumulated as semilabile dissolved organic nitrogen (DON), and subsequent recycling of this semilabile DON supported enhanced primary productivity for the next several years as the semilabile DON perturbation was gradually removed via export.
    Description: This work was supported in part by the Center for Microbial Oceanography, Research and Education (C-MORE) (NSF EF-0424599), Hawaii Ocean Time series program (NSF OCE09–26766), the Gordon and Betty Moore Foundation, and the Marine Biological Laboratory.
    Description: 2013-03-10
    Keywords: Mesoscale activity ; North Pacific Subtropical Gyre ; Dissolved organic nitrogen ; Interannual variability ; Primary production
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: text/plain
    Format: application/msword
    Format: application/pdf
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  • 6
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 115 (2010): C03024, doi:10.1029/2009JC005267.
    Description: The Southern Ocean is a climatically sensitive region that plays an important role in the regional and global modulation of atmospheric CO2. Based on satellite-derived sea ice data, wind and cloudiness estimates from numerical models (National Centers for Environmental Prediction-National Center for Atmospheric Research reanalysis), and in situ measurements of surface (0–20 m depth) chlorophyll a (ChlSurf) and dissolved inorganic carbon (DICSurf) concentration, we show sea ice concentration from June to November and spring wind patterns between 1979 and 2006 had a significant influence on midsummer (January) primary productivity and carbonate chemistry for the Western Shelf of the Antarctic Peninsula (WAP, 64°–68°S, 63.4°–73.3°W). In general, strong (〉3.5 m s−1) and persistent (〉2 months) northerly winds during the previous spring were associated with relatively high (monthly mean 〉 2 mg m−3) ChlSurf and low (monthly mean 〈 2 mmol kg−1) salinity-corrected DIC (DICSurf*) during midsummer. The greater ChlSurf accumulation and DICSurf* depletion was attributed to an earlier growing season characterized by decreased spring sea ice cover or nearshore accumulation of phytoplankton in association with sea ice. The impact of these wind-driven mechanisms on ChlSurf and DICSurf* depended on the extent of sea ice area (SIA) during winter. Winter SIA affected phytoplankton blooms by changing the upper mixed layer depth (UMLD) during the subsequent spring and summer (December–January–February). Midsummer DICSurf* was not related to DICSurf* concentration during the previous summer, suggesting an annual replenishment of surface DIC during fall/winter and a relatively stable pool of deep (〉200 m depth) “winter-like” DIC on the WAP.
    Description: This research was supported by NSF OPP grants 0217282 to HWD at the Virginia Institute of Marine Science and 0823101 to HWD at the MBL.
    Keywords: Climate variability ; Antarctica ; Carbonate system
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 7
    Publication Date: 2022-05-26
    Description: © 2009 The Authors. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 4 (2009): e6372, doi:10.1371/journal.pone.0006372.
    Description: Massively parallel pyrosequencing of amplicons from the V6 hypervariable regions of small-subunit (SSU) ribosomal RNA (rRNA) genes is commonly used to assess diversity and richness in bacterial and archaeal populations. Recent advances in pyrosequencing technology provide read lengths of up to 240 nucleotides. Amplicon pyrosequencing can now be applied to longer variable regions of the SSU rRNA gene including the V9 region in eukaryotes. We present a protocol for the amplicon pyrosequencing of V9 regions for eukaryotic environmental samples for biodiversity inventories and species richness estimation. The International Census of Marine Microbes (ICoMM) and the Microbial Inventory Research Across Diverse Aquatic Long Term Ecological Research Sites (MIRADA-LTERs) projects are already employing this protocol for tag sequencing of eukaryotic samples in a wide diversity of both marine and freshwater environments. Massively parallel pyrosequencing of eukaryotic V9 hypervariable regions of SSU rRNA genes provides a means of estimating species richness from deeply-sampled populations and for discovering novel species from the environment.
    Description: This work was supported by grants from the W.M. Keck Foundation and the Woods Hole Center for Oceans and Human Health from the National Institutes of Health and National Science Foundation (NIH/NIEHS 1 P50 ES012742-01 and NSF/OCE 0430724-J) (LAZ and SH).
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 26 (2012): GB2005, doi:10.1029/2010GB004028.
    Description: In connection with the Palmer LTER program, mixed layer water samples were collected during the cruise of the L.M. Gould in Jan., 2008 at 49 stations on a 20 × 100 km grid in the West Antarctica Peninsula (WAP) region of the Southern Ocean. In this study, [O2]/[Ar] ratios and the triple isotope composition of dissolved O2 were measured, and were used to estimate net community O2 production (NCP) and gross primary O2 production (GPP), respectively. These estimates are further converted to carbon export production, primary production and the f-ratio. Our measurements give NCP ranging from −3 to 76 mmol O2 m−2 day−1 (−25 to 650 mg C m−2 day−1), and GPP from 40 to 220 mmol O2 m−2 day−1 (180 to 1010 mg C m−2 day−1). The O2 NCP/GPP ratios range from −0.04 to 0.43, corresponding to f-ratios of −0.08 to 0.83. NCP and the NCP/GPP ratio are highest in the northern coastal areas, and decrease to lower values toward the southern coastal area and the open ocean. The inshore-offshore gradient appears to be regulated primarily by iron availability, as supported by the positive correlation between NCP and Fv/Fm ratios (r2 = 0.22, p 〈 0.05). Mixed layer depth (MLD) is inversely correlated with NCP (r2 = 0.21, p 〈 0.002) and NCP/GPP (r2 = 0.21, p 〈 0.02), and highest NCP occurred in the fresh water lenses probably formed from melted coastal glaciers. These results suggest that export production and the f-ratio increase where water stratification is intensified by input of fresh meltwater, and that mixed layer stratification is the major factor regulating NCP in the inner-shelf and coastal regions. Along-shelf variability of phytoplankton community composition is highly correlated with NCP, i.e., NCP increases when the diatom-dominated community in the south transitions to the cryptophyte-dominated one in the north. A high correlation is also observed between NCP and the logarithm of the surface chlorophyll concentration (r2 = 0.72, p 〈 0.0001) , which makes it possible to estimate carbon export as a function of Chl a concentration in this region.
    Description: This research was supported by NSF-OPP grant 0823101 to Ducklow and NASA Earth and Space Sciences Fellowship to Huang.
    Description: 2012-10-24
    Keywords: Southern Ocean ; Chlorophyll ; Gross primary production ; Net community production ; Oxygen isotopes ; Phytoplankton
    Repository Name: Woods Hole Open Access Server
    Type: Article
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