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  • 2000-2004  (4)
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  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 48 (2001), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Thirty clones derived from twenty isolates of heterotrophic nanoflagellates originating from a variety of marine and freshwater environments were examined by restriction fragment length polymorphism analysis of small subunit ribosomal RNA genes amplified by the polymerase chain reaction (riboprinting). The data were compared with light and electron microscopical identification of the isolates. On morphological criteria, sixteen of the thirty clones belonged to the genus Paraphysomonas De Saedeleer, seven to the genus Spumella Cienkowski, four to the genus Pteridomonas Penard and three to the genus Cafeteria Fenchel and Patterson. Among these taxa, eleven ribotypes were detected by analysis with the restriction enzymes Hinf I, Hae III, Sau 3A I, and Msp I. Differentiation of nanoflagellate taxa by the riboprinting method supported taxonomic classification based on morphology at the generic and species level. The utility of the method for discriminating the ‘naked’ flagellates and for confirming the identity of polymorphic forms among species of Paraphysomonas is demonstrated.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 51 (2004), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Modern genetic and immunological techniques have become important tools for assessing protistan species diversity for both the identification and quantification of specific taxa in natural microbial communities. Although these methods are still gaining use among ecologists, the new approaches have already had a significant impact on our understanding of protistan diversity and biogeography. For example, genetic studies of environmental samples have uncovered many protistan phylotypes that do not match the DNA sequences of any cultured organisms, and whose morphological identities are unknown at the present time. Additionally, rapid and sensitive methods for detecting and enumerating taxa of special importance (e.g. bloom-forming algae, parasitic protists) have enabled much more detailed distributional and experimental studies than have been possible using traditional methods. Nevertheless, while the application of molecular approaches has advanced some aspects of aquatic protistan ecology, significant issues still thwart the widespread adoption of these approaches. These issues include the highly technical nature of some of the molecular methods, the reconciliation of morphology-based and sequence-based species identifications, and the species concept itself.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 2018-05-08
    Description: Nanoplankton and picoplankton abundance and community grazing on picoplankton were determined in summer and autumn at several stations in a productive coastal environment (Georges Bank, NW Atlantic Ocean) and in an oligotrophic oceanic ecosystem (Sargasso Sea). Ranges of heterotrophic nanoplankton (HNAN) abundance were 1.2 to 3.6 x 103 cells ml-1 on Georges Bank, and 2.2 to 6.8 x 102 cells ml-1 in the Sargasso Sea. Ranges of phototrophic nanoplankton (PNAN) abundance in these ecosystems were 1.9 to 6.0 x 103 and 1.3 to 4.7 x 102, respectively. Mixotrophic nanoplankton (MNAN), operationally defined here as chloroplast-bearing nanoplankton that ingested fluorescent tracers, comprised an average of 12 to 17% of PNAN in surface waters in both environments during August and October. Mixotrophs at specific stations constituted as much as 38% of total PNAN abundance on Georges Bank and 30% in the Sargasso Sea. Mixotrophs represented up to 39% of the total phagotrophic nanoplankton abundance (MNAN/[MNAN + HNAN]). Community grazing impact was estimated from the disappearance of fluorescent prey surrogates (fluorescently labeled bacteria, FLB; cyanobacteria, FLC; and 〈\3 µm algae, FLA). Absolute grazing rates (total picoplankton cells removed d-1) on Georges Bank exceeded those in the Sargasso Sea due to the greater abundances of predators and prey. However, there was overlap in the specific grazing losses at the 2 sites (ranges = 0.08 to 0.38 d-1 in the coastal ocean and 0.05 to 0.24 d-1 in the oligotrophic ocean). Rates of bacterivory were in approximate balance with rates of bacterial production (3H-thymidine uptake), but production exceeded bacterivory on Georges Bank during the summer cruise. These data are among the first documenting the impact of grazing on picoplankton in these environments, and they are consistent with the prediction that nanoplanktonic protists are major predators of picoplankton. While the proportion of phototrophs that are phagotrophic was highly variable, our study indicates that algal mixotrophy is widespread in the marine environment, occurring in both coastal and oligotrophic sites, and should be considered quantitatively in microbial food web investigations.
    Type: Article , PeerReviewed
    Format: text
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  • 4
    Publication Date: 2016-05-26
    Description: Experiments were carried out on Georges Bank, a productive coastal region in the northwestern sector of the North Atlantic Ocean, and in the oligotrophic western Sargasso Sea to examine the effects of nutrient (inorganic nitrogen and phosphorus) and organic carbon (glucose) additions on bacterial and phytoplankton growth. Four experiments were conducted in each environment. Phytoplankton growth was monitored over a 36 h period by following changes in the concentration of chlorophyll in unfiltered seawater and in seawater prefiltered through 5 μm screening to reduce grazing pressure. Bacterial production was estimated initially and after 24 h using the 3H-thymidine (TdR) method in unfiltered seawater and in 1 μm filtrate. Phytoplankton biomass increased significantly in response to nutrient additions in all but 1 experiment, whereas chlorophyll concentrations remained unchanged or decreased in all of the unamended (control) treatments or treatments supplemented with glucose. Responses of the phytoplankton community were similar for the 〈5 μm and unfiltered treatments. Bacterial production increased after 24 h in all of the treatments on Georges Bank, and there was little effect of nutrient or glucose addition in unfiltered seawater relative to unamended controls. However, glucose addition to the 〈1 μm filtrate caused substantial increases in bacterial production relative to controls and N/P-amended treatments in 2 of the experiments from this environment. Glucose had no stimulatory effect (relative to unamended treatments) in 3 of the 4 Sargasso Sea experiments, and only a marginal effect in the fourth. However, the addition of inorganic nitrogen and phosphorus in the latter ecosystem resulted in higher bacterial production (relative to unamended treatments or glucose addition) in 2 of the experiments with unfiltered seawater, and very large increases in 3 of the experiments with 1 μm filtrate. The magnitude of the changes in bacterial production differed greatly between unfiltered and filtered seawater in both ecosystems, indicating an important role for bacterial grazers in controlling bacterial population growth. The results of this study indicate different nutritional restraints on bacterial production in these contrasting environments.
    Type: Article , PeerReviewed
    Format: text
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