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  • 1
    In: Cell, Elsevier BV, Vol. 129, No. 6 ( 2007-06), p. 1165-1176
    Type of Medium: Online Resource
    ISSN: 0092-8674
    RVK:
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    Language: English
    Publisher: Elsevier BV
    Publication Date: 2007
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    detail.hit.zdb_id: 2001951-8
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2007
    In:  Wuhan University Journal of Natural Sciences Vol. 12, No. 1 ( 2007-1), p. 1-4
    In: Wuhan University Journal of Natural Sciences, Springer Science and Business Media LLC, Vol. 12, No. 1 ( 2007-1), p. 1-4
    Type of Medium: Online Resource
    ISSN: 1007-1202
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2007
    detail.hit.zdb_id: 2365459-4
    SSG: 11
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  • 3
    Online Resource
    Online Resource
    Future Science Ltd ; 2008
    In:  BioTechniques Vol. 45, No. 5 ( 2008-11), p. 543-557
    In: BioTechniques, Future Science Ltd, Vol. 45, No. 5 ( 2008-11), p. 543-557
    Abstract: TaqMan probe (dual-labeled DNA probe)–based real-time detection, one of the most sensitive and specific fluorescent detection methods, has been widely utilized in conjunction with polymerase chain reaction (PCR). Helicase-dependent amplification (HDA) is an isothermal amplification technology that has a similar reaction scheme to PCR, but replaces thermocycling with a helicase capable of unwinding a DNA duplex. Here we describe a novel isothermal real-time detection method (HDA-TaqMan) that combines the advantages of both HDA and a TaqMan assay. In this assay, the reactions of DNA unwinding, primer annealing, polymerization, probe hybridization, and subsequent hydrolysis by the polymerase are coordinated and synchronized to perform at a single temperature. It not only provides a useful tool for real-time detection of HDA, but also provides an isothermal format for the TaqMan system. With this platform, we have successfully developed rapid real-time isothermal assays for biodefense targets that include Vibrio cholerae and Bacillus anthracis.
    Type of Medium: Online Resource
    ISSN: 0736-6205 , 1940-9818
    Language: English
    Publisher: Future Science Ltd
    Publication Date: 2008
    detail.hit.zdb_id: 1496354-1
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  • 4
    In: Journal of Neurochemistry, Wiley, Vol. 107, No. 6 ( 2008-12), p. 1614-1633
    Abstract: The molecular diversity of phospholipids is essential for their structural and signaling functions in cell membranes. In the current work, we present, the results of mass spectrometric characterization of individual molecular species in major classes of phospholipids – phosphatidylcholine (PtdCho), phosphatidylethanolamine (PtdEtn), phosphatidylserine (PtdSer), phosphatidylinositol (PtdIns), sphingomyelin (CerPCho), and cardiolipin (Ptd 2 Gro) – and their oxidation products during apoptosis induced in neurons by staurosporine (STS). The diversity of molecular species of phospholipids in rat cortical neurons followed the order Ptd 2 Gro 〉 PtdEtn 〉 〉 PtdCho 〉 〉 PtdSer 〉 PtdIns 〉 CerPCho. The number of polyunsaturated oxidizable species decreased in the order Ptd 2 Gro 〉 〉 PtdEtn 〉 PtdCho 〉 PtdSer 〉 PtdIns 〉 CerPCho. Thus a relatively minor class of phospholipids, Ptd 2 Gro, was represented in cortical neurons by the greatest variety of both total and peroxidizable molecular species. Quantitative fluorescence HPLC analysis employed to assess the oxidation of different classes of phospholipids in neuronal cells during intrinsic apoptosis induced by STS revealed that three anionic phospholipids – Ptd 2 Gro 〉 〉 PtdSer 〉 PtdIns – underwent robust oxidation. No significant oxidation in the most dominant phospholipid classes – PtdCho and PtdEtn – was detected. MS‐studies revealed the presence of hydroxy‐, hydroperoxy‐ as well as hydroxy‐/hydroperoxy‐species of Ptd 2 Gro, PtdSer, and PtdIns. Experiments in model systems where total cortex Ptd 2 Gro and PtdSer fractions were incubated in the presence of cytochrome c (cyt c ) and H 2 O 2 , confirmed that molecular identities of the products formed were similar to the ones generated during STS‐induced neuronal apoptosis. The temporal sequence of biomarkers of STS‐induced apoptosis and phospholipid peroxidation combined with recently demonstrated redox catalytic properties of cyt c realized through its interactions with Ptd 2 Gro and PtdSer suggest that cyt c acts as a catalyst of selective peroxidation of anionic phospholipids yielding Ptd 2 Gro and PtdSer peroxidation products. These oxidation products participate in mitochondrial membrane permeability transition and in PtdSer externalization leading to recognition and uptake of apoptotic cells by professional phagocytes.
    Type of Medium: Online Resource
    ISSN: 0022-3042 , 1471-4159
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2008
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  • 5
    Online Resource
    Online Resource
    Wiley ; 2007
    In:  Ecological Research Vol. 22, No. 1 ( 2007-01), p. 115-124
    In: Ecological Research, Wiley, Vol. 22, No. 1 ( 2007-01), p. 115-124
    Abstract: We compared wintering bird communities and their habitats among three shoals at Jiuduansha, a newly‐formed wetland in the Yangtze River estuary. The highest species richness and diversity were recorded in Shangsha, which is the highest shoal, and the highest abundance and lowest species diversity were recorded in Xiasha, which is the lowest shoal. Shangsha had the largest abundance of perching birds whereas Xiasha was the most abundant in waterbirds. Bird assemblages showed different associations with the different habitat types—perching birds were favored by reed ( Phragmites australis ) communities, shallow water foragers and dabbling ducks preferred sea‐bulrush ( Scirpus mariqueter ) communities, and moist‐soil foragers and gulls showed a preference for bare intertidal zones. All bird assemblages, however, avoided the smooth cordgrass ( Spartina alterniflora ) communities, which are dominated by an alien invasive plant. The composition of avian communities was related to habitat types at the three shoals. Our results suggest that the newly‐formed tidelands can provide suitable habitats for waterbirds and that the lower tidelands can attract more waterfowl than the higher tidelands. Because the shoal with low species diversity could have exclusive bird species, conservation efforts should not concentrate only on the area with high species diversity. The estuarine wetlands should be considered as a whole when conservation strategies are designed. The alien invasive plant should, moreover, be effectively controlled, to provide suitable habitats for birds.
    Type of Medium: Online Resource
    ISSN: 0912-3814 , 1440-1703
    Language: English
    Publisher: Wiley
    Publication Date: 2007
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  • 6
    In: ELECTROPHORESIS, Wiley, Vol. 27, No. 21 ( 2006-11), p. 4182-4187
    Abstract: A novel method of inline coupling of microdialysis (MD) with CE has been investigated. A polysulfone MD membrane was in situ prepared at the inlet end of the separation capillary, which endued the capillary with an additional function of clean‐up sampling and made the pretreatment of complex matrices simple. The properties of the membrane and its influence on electrophoresis were evaluated. The membrane cut off macromolecules and particles efficiently and persistently, and changing the components of membrane‐casting solution could control the molecular weight cutoff of the membrane. Using the capillary having the MD membrane in electrophoresis, column efficiency with little reduction was achieved. The mixture of chlorpheniramine (CPA) and BSA was used to verify the analytical characteristics. Only the peak of CPA appears in the electropherograms and the RSDs of migration times and peak areas of CPA were 0.8 and 4.6%, respectively. The method was applied for the determination of glucose in human blood using an electrochemical detector. Whole blood containing glucose and macromolecules was electrokinetically injected directly into the capillary without pretreatment, and the concentration of glucose in human blood was 5.5 mmol/L. Equilibrium dialysis injection is also investigated in this paper. The results show that the method may be further used for in vivo sampling to monitor the endogenous or exogenous small molecules and their metabolites.
    Type of Medium: Online Resource
    ISSN: 0173-0835 , 1522-2683
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2006
    detail.hit.zdb_id: 1475486-1
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  • 7
    Online Resource
    Online Resource
    Proceedings of the National Academy of Sciences ; 2008
    In:  Proceedings of the National Academy of Sciences Vol. 105, No. 46 ( 2008-11-18), p. 17772-17777
    In: Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 105, No. 46 ( 2008-11-18), p. 17772-17777
    Abstract: Intrinsically disordered proteins play critical but often poorly understood roles in mediating protein interactions. The interactions of disordered proteins studied to date typically entail structural stabilization, whether as a global disorder-to-order transition or minimal ordering of short linear motifs. The disordered cyclin-dependent kinase (CDK) inhibitor Sic1 interacts with a single site on its receptor Cdc4 only upon phosphorylation of its multiple dispersed CDK sites. The molecular basis for this multisite-dependent interaction with a single receptor site is not known. By NMR analysis, we show that multiple phosphorylated sites on Sic1 interact with Cdc4 in dynamic equilibrium with only local ordering around each site. Regardless of phosphorylation status, Sic1 exists in an intrinsically disordered state but is surprisingly compact with transient structure. The observation of this unusual binding mode between Sic1 and Cdc4 extends the understanding of protein interactions from predominantly static complexes to include dynamic ensembles of intrinsically disordered states.
    Type of Medium: Online Resource
    ISSN: 0027-8424 , 1091-6490
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    Language: English
    Publisher: Proceedings of the National Academy of Sciences
    Publication Date: 2008
    detail.hit.zdb_id: 209104-5
    detail.hit.zdb_id: 1461794-8
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  • 8
    In: Blood, American Society of Hematology, Vol. 108, No. 11 ( 2006-11-16), p. 5140-5140
    Abstract: Unrelated donor HSCT and haploidentical related donor HSCT have been evaluated as alternative transplant options for the approximately 70% of patients without an HLA-identical sibling donor. To compare the clinical outcomes between Non-TCD unrelated donor HSCT and Non-TCD haploidentical HSCT, we studied 55 patients with high-risk or advanced leukemia who underwent Non-TCD HSCT from unrelated or haploidentical related donors from June 2001 to May 2006. Group A including 25 patients received HLA-matched unrelated donor HSCT, group B, including the other 30 patients, received HLA-haploidentical family donor HSCT. 20 recipient/donor pairs were allele matched and 5 pairs were 1–2 alleles disparity mismatched in the group A, HLA-haploidentical family donors in the group B included mother (22 cases), sibling(5 cases) and offspring (3 cases). Patients with myeloid leukemia were conditioned with the regimen consisting of Simustine (MeCCNU) 250mg/m2×1day, Ara-c 4g/ m2×2days, busulfan (Bu) 4mg/kg×3days, and cyclophosphamide (Cy)1.8g/m2×2days, patients with lymphoblastic leukemia were conditioned with the regimen consisting of MeCCNU 250mg/m2×1day, total-body irradition(TBI) 8Gy×1day, Ara-c 4g/ m2×2days, and Cy 1.8g/m2×2days. 15 patients received Non-TCD bone marrow transplantation (BMT), and 10 patients received Non-TCD peripheral blood stem cell transplantation (PBSCT) in the group A. 17 patients received G-CSF-primed bone marrow grafts that had not been depleted ex vivo of T cells, and 13 patients received G-CSF-primed bone marrow grafts plus G-CSF-mobilized peripheral blood stem cell without ex vivo T cell depletion in the group B. Prophylaxis against GVHD was performed with cyclosporine (CSP), short-term methotrexate (MTX), and mycophenolate mofetil (MMF), some patients received the combination of CSP, MTX and MMF plus antithymocyte globulin (ATG). When GVHD developed, methylprednisolone(MP) was given at first, if the response was poor, anti-CD25 monoclonal antibody was given to the patients as quickiy as possible and CSP was replaced with tacrolimus. All patients of the group A and 29 patients of the group B were engrafted successfully. Acute GVHD grades III-IVoccurred in 10 and 11 patients in the group A and B, respectively(the cumulaitive incidence 40% vs 37.9%, P & gt;0.05). 2 patients relapsed in each group (the actuarial probilities of relapse 8% vs 6%, P & gt;0.05). The 2-year probabilities of event-free survival(EFS) for the group A and B were (58.7±5.9)% and (42.2±2.0)%, respectively (P & gt;0.05). 10 patients of the group A and 17 of the group B died of transplantation- related disease. The primary causes of death included severe acute GVHD and pulmonary infection. These results suggested that both Non-TCD unrelated donor HSCT and Non-TCD haploidentical related donor HSCT are effective treatments for patients with refractory or high-risk hematologic malignancies, the high transplantation related mortality due to GVHD and infection is still a major challenge.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2006
    detail.hit.zdb_id: 1468538-3
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  • 9
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2008
    In:  Biochemistry and Cell Biology Vol. 86, No. 5 ( 2008-10), p. 380-385
    In: Biochemistry and Cell Biology, Canadian Science Publishing, Vol. 86, No. 5 ( 2008-10), p. 380-385
    Abstract: It is controversial whether DNA methylation plays a functional role in Drosophila . We have studied testis DNA of Drosophila melanogaster Meigen, 1830 with antisera against 5-methylcytosine (5mC) and found no evidence for the presence of significant amounts of 5mC. Reactions occur only with 1 of 3 5mC antisera, but they are restricted to nuclear regions without detectable amounts of DNA. The antisera apparently cross-react with other nuclear components. If the murine de novo DNA methyltransferases, DNMT3A and DNMT3B, are expressed under the control of the spermatocyte-specific β2-tubulin promoter in testes, DNA methylation is not increased and no effects on the fertility of the fly are seen. DNA methylation has, therefore, no functional relevance in the male germ line of Drosophila.
    Type of Medium: Online Resource
    ISSN: 0829-8211 , 1208-6002
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2008
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  • 10
    In: Oncology Reports, Spandidos Publications, ( 2007-10-01)
    Type of Medium: Online Resource
    ISSN: 1021-335X , 1791-2431
    Language: Unknown
    Publisher: Spandidos Publications
    Publication Date: 2007
    detail.hit.zdb_id: 1222484-4
    detail.hit.zdb_id: 2120548-6
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