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  • 2005-2009  (2)
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  • 2005-2009  (2)
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  • 1
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2008
    In:  Canadian Journal of Microbiology Vol. 54, No. 9 ( 2008-09), p. 742-747
    In: Canadian Journal of Microbiology, Canadian Science Publishing, Vol. 54, No. 9 ( 2008-09), p. 742-747
    Abstract: Our purpose was to establish a quick and accurate real-time PCR (rtPCR) method to detect Campylobacter jejuni directly from human diarrheal stool as an alternative to traditional culture methods. To determine the consistency of rtPCR and culture method, 256 clinical diarrheal stool samples and 50 normal stool samples from healthy individuals were examined, and the whole process was double-blinded. Our data showed that the sensitivity of rtPCR in pure cultures and stool was 10 2 CFU·mL –1 and 10 3 CFU·g –1 , respectively. Of the 256 diarrheal samples, 10 specimens were successfully detected by both methods, whereas two specimens were PCR positive but culture negative. No positive results were found by these two methods in 50 normal specimens. Our data suggested that rtPCR was convenient in operation and time-saving (turnaround time 3.5–4 h), so it could be used for clinical diagnostic and epidemiological purposes.
    Type of Medium: Online Resource
    ISSN: 0008-4166 , 1480-3275
    RVK:
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2008
    detail.hit.zdb_id: 280534-0
    detail.hit.zdb_id: 1481972-7
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    S. Karger AG ; 2008
    In:  Digestion Vol. 78, No. 2-3 ( 2008), p. 131-138
    In: Digestion, S. Karger AG, Vol. 78, No. 2-3 ( 2008), p. 131-138
    Abstract: 〈 i 〉 Aim: 〈 /i 〉 To establish and evaluate a quick and accurate DNA microarray method to detect intestinal pathogens directly from human diarrheal stool samples as an alternative to traditional culture methods. 〈 i 〉 Method: 〈 /i 〉 Primers and 21 oligonucleotide probes based on sequences of the bacterial 16SrRNA gene were arrayed on microarray slides. Hybridization between probes and amplicons was performed. To determine the consistency of DNA microarray and culture method, 1,500 samples of clinical diarrheal stool and 200 samples of normal stool from healthy individuals were examined in a double-blind fashion. Basic information from patients was collected and analyzed. 〈 i 〉 Result: 〈 /i 〉 Our data showed that the probes of the assay were successful in discriminating 14 genera or species of intestinal pathogens. The limit of detection was approximately 10 〈 sup 〉 3 〈 /sup 〉 CFU/ml for one species of pathogen. Of the 1,500 clinical cases, 32.7% of the patient stools were positive for bacteria. Using stool culture as a control, gene-chip sensitivity was 100%, specificity 95.2%, and index of accurate diagnosis 0.952. 〈 i 〉 Conclusion: 〈 /i 〉 Our data suggested that DNA microarray with its high efficiency and accuracy could be used as an alternative to the culture method.
    Type of Medium: Online Resource
    ISSN: 0012-2823 , 1421-9867
    RVK:
    RVK:
    Language: English
    Publisher: S. Karger AG
    Publication Date: 2008
    detail.hit.zdb_id: 1482218-0
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