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  • 1
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    Towards a better understanding of microbial carbon flux in the sea (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2008. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Aquatic Microbial Ecology 53 (2008): 21-38, doi:10.3354/ame01230.
    Description: We now have a relatively good idea of how bulk microbial processes shape the cycling of organic matter and nutrients in the sea. The advent of the molecular biology era in microbial ecology has resulted in advanced knowledge about the diversity of marine microorganisms, suggesting that we might have reached a high level of understanding of carbon fluxes in the oceans. However, it is becoming increasingly clear that there are large gaps in the understanding of the role of bacteria in regulating carbon fluxes. These gaps may result from methodological as well as conceptual limitations. For example, should bacterial production be measured in the light? Can bacterial production conversion factors be predicted, and how are they affected by loss of tracers through respiration? Is it true that respiration is relatively constant compared to production? How can accurate measures of bacterial growth efficiency be obtained? In this paper, we discuss whether such questions could (or should) be addressed. Ongoing genome analyses are rapidly widening our understanding of possible metabolic pathways and cellular adaptations used by marine bacteria in their quest for resources and struggle for survival (e.g. utilization of light, acquisition of nutrients, predator avoidance, etc.). Further, analyses of the identity of bacteria using molecular markers (e.g. subgroups of Bacteria and Archaea) combined with activity tracers might bring knowledge to a higher level. Since bacterial growth (and thereby consumption of DOC and inorganic nutrients) is likely regulated differently in different bacteria, it will be critical to learn about the life strategies of the key bacterial species to achieve a comprehensive understanding of bacterial regulation of C fluxes. Finally, some processes known to occur in the microbial food web are hardly ever characterized and are not represented in current food web models. We discuss these issues and offer specific comments and advice for future research agendas.
    Description: Our work was supported by the following grants: NSF grant 0217282 (H.D.), Spanish MEC grant MODIVUS (J.M.G.), the Swedish Science Council (J.P.), the IEO time-series RADIALES programme (X.A.G.M.), the Earth and Life Science Division of the Dutch Science Foundation, ARCHIMEDES project, #835.20.023 (G.J.H.).
    Keywords: Carbon flux ; Microbial ecology ; Ocean ; Bacteria ; Protists ; Light ; Genomics ; Chemoautotrophy ; Models
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
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    Multiscale control of bacterial production by phytoplankton dynamics and sea ice along the western Antarctic Peninsula : a regional and decadal investigation (2012)
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2012. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Journal of Marine Systems 98-99 (2012): 26-39, doi:10.1016/j.jmarsys.2012.03.003.
    Description: We present results on phytoplankton and bacterial production and related hydrographic properties collected on nine annual summer cruises along the western Antarctic Peninsula. This region is strongly influenced by interannual variations in the duration and extent of sea ice cover, necessitating a decade-scale study. Our study area transitions from a nearshore region influenced by summer runoff from glaciers to an offshore, slope region dominated by the Antarctic Circumpolar Current. The summer bacterial assemblage is the product of seasonal warming and freshening following spring sea ice retreat and the plankton succession occurring in that evolving water mass. Bacterial production rates averaged 20 mgC m-2 d-1 and were a low (5%) fraction of the primary production (PP). There was significant variation in BP between regions and years, reflecting the variability in sea ice, Chlorophyll and PP. Leucine incorporation was significantly correlated (r2 ranging 0.2-0.7, p〈0.001) with both chlorophyll and PP across depths, regions and years indicating strong phytoplankton-bacteria coupling. Relationships with temperature were variable, including positive, negative and insignificant relationships (r2 〈0.2 for regressions with p〈0.05). Bacterial production is regulated indirectly by variations in sea ice cover within regions and over years, setting the levels of phytoplankton biomass accumulation and PP rates; these in turn fuel BP, to which PP is coupled via direct release from phytoplankton or other less direct pathways.
    Description: This research was supported by NSF Grants OPP-0217282 and 0823101 from the Antarctic Organisms and Ecosystems Program to HWD.
    Keywords: Bacteria ; Antarctica ; Bacterial production ; Primary production ; Sea ice
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 3
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    Long-term ecological research in a human-dominated world (2012)
    American Institute of Biological Sciences
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Institute of Biological Sciences, 2012. This article is posted here by permission of American Institute of Biological Sciences for personal use, not for redistribution. The definitive version was published in BioScience 62 (2012): 342-253, doi:10.1525/bio.2012.62.4.6.
    Description: The US Long Term Ecological Research (LTER) Network enters its fourth decade with a distinguished record of achievement in ecological science. The value of long-term observations and experiments has never been more important for testing ecological theory and for addressing today's most difficult environmental challenges. The network's potential for tackling emergent continent-scale questions such as cryosphere loss and landscape change is becoming increasingly apparent on the basis of a capacity to combine long-term observations and experimental results with new observatory-based measurements, to study socioecological systems, to advance the use of environmental cyberinfrastructure, to promote environmental science literacy, and to engage with decisionmakers in framing major directions for research. The long-term context of network science, from understanding the past to forecasting the future, provides a valuable perspective for helping to solve many of the crucial environmental problems facing society today.
    Description: 2012-10-01
    Keywords: Coupled natural—human systems ; Cyberinfrastructure ; Environmental observatories ; Environmental education ; Socioecological systems
    Repository Name: Woods Hole Open Access Server
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  • 4
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    A new US polar research vessel for the twenty-first century (2012)
    The Oceanography Society
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    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 3 (2012): 204-207, doi:10.5670/oceanog.2012.96.
    Description: Scientific and political interests at the poles are significant and rapidly increasing, driven in part by the effects of climate change and emerging geopolitical realities. The polar regions provide important services to global ecosystems and humankind, ranging from food and energy to freshwater and biodiversity. Yet the poles are experiencing changes at rates that far outpace the rest of the planet. Coastal Arctic communities are impacted by climate change through coastal erosion, sea level rise, ice loss, and altered marine food webs, threatening the future of their subsistence lifestyle. Climate change has dramatically increased the melt rate of ice sheets and glaciers at both poles and has the potential to significantly raise sea level worldwide. Oil and gas drilling as well as transportation in the Arctic have reached all-time high levels, in part because of reduced sea ice cover. Tourism is a growing industry at both poles, bringing more than 20,000 tourists each year to the western Antarctic Peninsula alone. The collateral effects of human activities include the potential for pollution of the marine environment, particularly through spills of hydrocarbons. Our ability to understand the effects of such activities and mishaps is limited, particularly in ice-covered areas during winter.
    Repository Name: Woods Hole Open Access Server
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  • 5
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    The disappearing cryosphere : impacts and ecosystem responses to rapid cryosphere loss (2012)
    American Institute of Biological Sciences
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Institute of Biological Sciences, 2012. This article is posted here by permission of American Institute of Biological Sciences for personal use, not for redistribution. The definitive version was published in BioScience 62 (2012): 405-415, doi:10.1525/bio.2012.62.4.11.
    Description: The cryosphere—the portion of the Earth's surface where water is in solid form for at least one month of the year—has been shrinking in response to climate warming. The extents of sea ice, snow, and glaciers, for example, have been decreasing. In response, the ecosystems within the cryosphere and those that depend on the cryosphere have been changing. We identify two principal aspects of ecosystem-level responses to cryosphere loss: (1) trophodynamic alterations resulting from the loss of habitat and species loss or replacement and (2) changes in the rates and mechanisms of biogeochemical storage and cycling of carbon and nutrients, caused by changes in physical forcings or ecological community functioning. These changes affect biota in positive or negative ways, depending on how they interact with the cryosphere. The important outcome, however, is the change and the response the human social system (infrastructure, food, water, recreation) will have to that change.
    Description: The authors wish to thank the funding provided by the National Science Foundation’s (NSF) Long Term Ecological Research (LTER) Network for supporting our long-term studies, in which we track the ecosystem response to the disappearing cryosphere. NSF LTER Site Grants OPP 0823101, OPP 1115245, DEB 1114804, DEB-1026415, DEB-0620579, and DEB-1027341 supported the authors during the preparation of this article.
    Description: 2012-10-01
    Keywords: Cryosphere ; Ecosystem response ; Environmental observatories
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 6
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    West Antarctic Peninsula : an ice-dependent coastal marine ecosystem in transition (2013)
    The Oceanography Society
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2013. This article is posted here by permission of The Oceanography Society] for personal use, not for redistribution. The definitive version was published in Oceanography 26, no. 3 (2013): 190–203, doi:10.5670/oceanog.2013.62.
    Description: The extent, duration, and seasonality of sea ice and glacial discharge strongly influence Antarctic marine ecosystems. Most organisms' life cycles in this region are attuned to ice seasonality. The annual retreat and melting of sea ice in the austral spring stratifies the upper ocean, triggering large phytoplankton blooms. The magnitude of the blooms is proportional to the winter extent of ice cover, which can act as a barrier to wind mixing. Antarctic krill, one of the most abundant metazoan populations on Earth, consume phytoplankton blooms dominated by large diatoms. Krill, in turn, support a large biomass of predators, including penguins, seals, and whales. Human activity has altered even these remote ecosystems. The western Antarctic Peninsula region has warmed by 7°C over the past 50 years, and sea ice duration has declined by almost 100 days since 1978, causing a decrease in phytoplankton productivity in the northern peninsula region. Besides climate change, Antarctic marine systems have been greatly altered by harvesting of the great whales and now krill. It is unclear to what extent the ecosystems we observe today differ from the pristine state.
    Description: Palmer LTER is supported by National Science Foundation grant ANT-0823101. Amsler was supported by NSF ANT- 0838773 and ANT-1041022. RaTS is a component of the Polar Oceans research program, funded by the British Antarctic Survey.
    Repository Name: Woods Hole Open Access Server
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  • 7
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    Penguin biogeography along the West Antarctic Peninsula : testing the canyon hypothesis with Palmer LTER observations (2013)
    The Oceanography Society
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    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2013. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 26, no. 3 (2013): 204–206, doi:10.5670/oceanog.2013.63.
    Description: The West Antarctic Peninsula (WAP) is home to large breeding colonies of the ice-dependent Antarctic Adélie penguin (Pygoscelis adeliae). Although the entire inner continental shelf is highly productive, with abundant phytoplankton and krill populations, penguin colonies are distributed heterogeneously along the WAP. This ecological conundrum targets a long-standing question of interest: what environmental factors structure the locations of Adélie penguin "hot spots" throughout the WAP?
    Description: Palmer LTER is supported by NSF grant OPP-0823101 and the Gordon and Betty Moore Foundation (1859).
    Repository Name: Woods Hole Open Access Server
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  • 8
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    High particle export over the continental shelf of the west Antarctic Peninsula (2010)
    American Geophysical Union
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    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 37 (2010): L22606, doi:10.1029/2010GL045448.
    Description: Drifting cylindrical traps and the flux proxy 234Th indicate more than an order of magnitude higher sinking fluxes of particulate carbon and 234Th in January 2009 than measured by a time-series conical trap used regularly on the shelf of the west Antarctic Peninsula (WAP). The higher fluxes measured in this study have several implications for our understanding of the WAP ecosystem. Larger sinking fluxes result in a revised export efficiency of at least 10% (C flux/net primary production) and a requisite lower regeneration efficiency in surface waters. High fluxes also result in a large supply of sinking organic matter to support subsurface and benthic food webs on the continental shelf. These new findings call into question the magnitude of seasonal and interannual variability in particle flux and reaffirm the difficulty of using moored conical traps as a quantitative flux collector in shallow waters.
    Description: Funding was provided by the WHOI Rinehart Access to the Sea program, the WHOI Coastal Oceans Institute, WHOI Academic Programs Office, and most significantly, from the NSF Office of Polar Programs for the PAL‐LTER (OPP 0823101), FOODBANCS and WAP Flux projects (OPP 0838866).
    Keywords: Particle export ; Sediment trap ; Thorium-234
    Repository Name: Woods Hole Open Access Server
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  • 9
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    Interannual variability of primary production and dissolved organic nitrogen storage in the North Pacific Subtropical Gyre (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 117 (2012): G03019, doi:10.1029/2011JG001830.
    Description: The upper ocean primary production measurements from the Hawaii Ocean Time series (HOT) at Station ALOHA in the North Pacific Subtropical Gyre showed substantial variability over the last two decades. The annual average primary production varied within a limited range over 1991–1998, significantly increased in 1999–2000 and then gradually decreased afterwards. This variability was investigated using a one-dimensional ecosystem model. The long-term HOT observations were used to constrain the model by prescribing physical forcings and lower boundary conditions and optimizing the model parameters against data using data assimilation. The model reproduced the general interannual pattern in the observed primary production, and mesoscale variability in vertical velocity was identified as a major contributing factor to the interannual variability in the simulation. Several strong upwelling events occurred in 1999, which brought up nitrate at rates several times higher than other years and elevated the model primary production. Our model results suggested a hypothesis for the observed interannual variability pattern of primary production at Station ALOHA: Part of the upwelled nitrate input in 1999 was converted to and accumulated as semilabile dissolved organic nitrogen (DON), and subsequent recycling of this semilabile DON supported enhanced primary productivity for the next several years as the semilabile DON perturbation was gradually removed via export.
    Description: This work was supported in part by the Center for Microbial Oceanography, Research and Education (C-MORE) (NSF EF-0424599), Hawaii Ocean Time series program (NSF OCE09–26766), the Gordon and Betty Moore Foundation, and the Marine Biological Laboratory.
    Description: 2013-03-10
    Keywords: Mesoscale activity ; North Pacific Subtropical Gyre ; Dissolved organic nitrogen ; Interannual variability ; Primary production
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
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    Introduction to the special issue on Antarctic oceanography in a changing world (2012)
    The Oceanography Society
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    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 3 (2012): 14-17, doi:10.5670/oceanog.2012.68.
    Description: "Antarctic Oceanography in a Changing World" commemorates the twentieth anniversary of the commissioning of Research Vessel Icebreaker (RVIB) Nathaniel B. Palmer and the fifteenth anniversary of Antarctic Research and Supply Vessel (ARSV) Laurence M. Gould. The addition of these two Antarctic research vessels to the US fleet in the 1990s ushered in a new era of Antarctic oceanographic research for US scientists and their international collaborators. Although several US Coast Guard icebreakers in the Arctic and Antarctic waters conduct oceanographic research, their primary mission is icebreaking to facilitate access to land-based stations. The Palmer was, and remains to this day, the first and only purpose-built US research icebreaker in Antarctic service and has been serving sea-going scientists in all areas of Antarctica's seas for two decades. The Gould has afforded reliable year-round access to Palmer Station and has conducted oceanographic research in the Antarctic Peninsula area since 1997.
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