In:
Molecular Informatics, Wiley, Vol. 30, No. 9 ( 2011-09), p. 817-826
Abstract:
Statistical models are frequently used to estimate molecular properties, e.g., to establish quantitative structure‐activity and structure‐property relationships. For such models, interpretability, knowledge of the domain of applicability, and an estimate of confidence in the predictions are essential. We develop and validate a method for the interpretation of kernel‐based prediction models. As a consequence of interpretability, the method helps to assess the domain of applicability of a model, to judge the reliability of a prediction, and to determine relevant molecular features. Increased interpretability also facilitates the acceptance of such models. Our method is based on visualization: For each prediction, the most contributing training samples are computed and visualized. We quantitatively show the effectiveness of our approach by conducting a questionnaire study with 71 participants, resulting in significant improvements of the participants’ ability to distinguish between correct and incorrect predictions of a Gaussian process model for Ames mutagenicity.
Type of Medium:
Online Resource
ISSN:
1868-1743
,
1868-1751
DOI:
10.1002/minf.201100059
Language:
English
Publisher:
Wiley
Publication Date:
2011
detail.hit.zdb_id:
2537668-8
SSG:
15,3
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