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  • Artikel  (2)
  • Inter-Research  (1)
  • Wiley  (1)
  • 2010-2014  (2)
  • 1
    Publikationsdatum: 2014-06-25
    Beschreibung: wo commonly used proxies based on the distribution of glycerol dialkyl glycerol tetraethers (GDGTs) are the TEX86 (TetraEther indeX of 86 carbon atoms) paleothermometer for sea surface temperature reconstructions and the BIT (Branched Isoprenoid Tetraether) index for reconstructing soil organic matter input to the ocean. An initial round-robin study of two sediment extracts, in which 15 laboratories participated, showed relatively consistent TEX86 values (reproducibility ±3–4°C when translated to temperature) but a large spread in BIT measurements (reproducibility ±0.41 on a scale of 0–1). Here we report results of a second round-robin study with 35 laboratories in which three sediments, one sediment extract, and two mixtures of pure, isolated GDGTs were analyzed. The results for TEX86 and BIT index showed improvement compared to the previous round-robin study. The reproducibility, indicating interlaboratory variation, of TEX86 values ranged from 1.3 to 3.0°C when translated to temperature. These results are similar to those of other temperature proxies used in paleoceanography. Comparison of the results obtained from one of the three sediments showed that TEX86 and BIT indices are not significantly affected by interlaboratory differences in sediment extraction techniques. BIT values of the sediments and extracts were at the extremes of the index with values close to 0 or 1, and showed good reproducibility (ranging from 0.013 to 0.042). However, the measured BIT values for the two GDGT mixtures, with known molar ratios of crenarchaeol and branched GDGTs, had intermediate BIT values and showed poor reproducibility and a large overestimation of the “true” (i.e., molar-based) BIT index. The latter is likely due to, among other factors, the higher mass spectrometric response of branched GDGTs compared to crenarchaeol, which also varies among mass spectrometers. Correction for this different mass spectrometric response showed a considerable improvement in the reproducibility of BIT index measurements among laboratories, as well as a substantially improved estimation of molar-based BIT values. This suggests that standard mixtures should be used in order to obtain consistent, and molar-based, BIT values.
    Repository-Name: EPIC Alfred Wegener Institut
    Materialart: Article , isiRev
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 2
    Publikationsdatum: 2022-05-25
    Beschreibung: Author Posting. © Inter-Research, 2009. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Aquatic Microbial Ecology 54 (2009): 127-133, doi:10.3354/ame01261.
    Beschreibung: Quorum sensing (QS) via acylated homoserine lactones (AHLs) was discovered in the ocean, yet AHLs are expected to be very short-lived at seawater pH due to rapid abiotic degradation. Quorum quenching, the enzymatic degradation of AHLs, is also likely. To better understand the potential for QS to regulate behaviors of marine bacteria, we investigated the degradation of a variety of AHL molecules in several types of seawater media. We did this by incubating AHLs and tracking their concentration using HPLC/electrospray-ionization mass-spectrometry (HPLC/ESI-MS). AHL concentrations decreased with time, and degradation rate coefficients were calculated by applying a first-order rate law. The rate of abiotic degradation showed strong dependence on acyl chain length and the presence of 3-oxo substitutions on the acyl chain. We found that the rate of abiotic degradation of AHLs in artificial seawater was much slower than that predicted by an oft-cited equation for non-marine media that takes only pH into account. However, AHLs degraded more rapidly in natural seawater than in artificial seawater, an observation we found to be due to quorum quenching enzyme activity. By applying calculated degradation rates in a simple steady-state calculation, we suggest that despite the observed quorum quenching activity, AHLs are likely to be viable signals in organic particles and in other microbial ‘hotpsots’ in marine environments.
    Beschreibung: This work was funded by a grant from the Office of Naval Research to B.A.S.V.M. (N0014-06-1-0134), and an NSF Graduate Student Fellowship to L.H.
    Schlagwort(e): Quorum sensing ; Quorum quenching ; Marine bacteria ; Acylated homoserine lactone ; HPLC ; Mass spectrometry ; Degradation
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
    Format: application/pdf
    Standort Signatur Einschränkungen Verfügbarkeit
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