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  • 1
    Publication Date: 2022-05-25
    Description: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PeerJ 4 (2016): e1770, doi:10.7717/peerj.1770.
    Description: A research cruise to Hannibal Bank, a seamount and an ecological hotspot in the coastal eastern tropical Pacific Ocean off Panama, explored the zonation, biodiversity, and the ecological processes that contribute to the seamount’s elevated biomass. Here we describe the spatial structure of a benthic anomuran red crab population, using submarine video and autonomous underwater vehicle (AUV) photographs. High density aggregations and a swarm of red crabs were associated with a dense turbid layer 4–10 m above the bottom. The high density aggregations were constrained to 355–385 m water depth over the Northwest flank of the seamount, although the crabs also occurred at lower densities in shallower waters (∼280 m) and in another location of the seamount. The crab aggregations occurred in hypoxic water, with oxygen levels of 0.04 ml/l. Barcoding of Hannibal red crabs, and pelagic red crabs sampled in a mass stranding event in 2015 at a beach in San Diego, California, USA, revealed that the Panamanian and the Californian crabs are likely the same species, Pleuroncodes planipes, and these findings represent an extension of the southern endrange of this species. Measurements along a 1.6 km transect revealed three high density aggregations, with the highest density up to 78 crabs/m2, and that the crabs were patchily distributed. Crab density peaked in the middle of the patch, a density structure similar to that of swarming insects.
    Description: This work was sponsored by a grant from the Dalio Foundation, Inc, through the Woods Hole Oceanographic Institution.
    Keywords: Swarms ; Ecological hotspot ; Patchiness ; Panama ; Eastern Pacific ; Seamount ; Pleuroncodes planipes ; Hypoxic environment ; Anomuran crabs
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 2555–2570, doi:10.1002/2014JC010564.
    Description: We tested the hypothesis that humpback whales aggregate at the southern flank of Stellwagen Bank (SB) in response to internal waves (IWs) generated semidiurnally at Race Point (RP) channel because of the presence of their preferred prey, planktivorous fish, which in turn respond to zooplankton concentrated by the predictable IWs. Analysis of synthetic aperture radar (SAR) images indicates that RP IWs approach the southern flank of SB frequently (∼62% of the images). Published reports of whale sighting data and archived SAR images point to a coarse spatial coincidence between whales and Race Point IWs at SB's southern flank. The responses of whales to IWs were evaluated via sightings and behavior of humpback whales, and IWs were observed in situ by acoustic backscatter and temperature measurements. Modeling of IWs complemented the observations, and results indicate a change of ∼0.4 m/s in current velocity, and ∼1.5 Pa in dynamic pressure near the bottom, which may be sufficient for bottom fish to detect the IWs. However, fish were rare in our acoustic observations, and fish response to the IWs could not be evaluated. RP IWs do not represent the leading edge of the internal tide, and they may have less mass-transport potential than typical coastal IWs. There was large interannual variability in whale sightings at SB's southern flank, with decreases in both numbers of sightings and proportion of sightings where feeding was observed from 2008 to 2013. Coincidence of whales and IWs was inconsistent, and results do not support the hypothesis.
    Description: We would also like to acknowledge funding from the National Oceanic and Atmospheric Administration Sea Grant (Woods Hole), the Woods Hole Oceanographic Institution, the ESA, and the German Aerospace Center.
    Description: 2015-10-02
    Keywords: Humpback whales ; Nonlinear internal waves ; Shallow temperate bank ; Ecological hotspots
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 3
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PeerJ 3 (2015): e926, doi:10.7717/peerj.926.
    Description: The barnacle Chthamalus fragilis is found along the US Atlantic seaboard historically from the Chesapeake Bay southward, and in the Gulf of Mexico. It appeared in New England circa 1900 coincident with warming temperatures, and is now a conspicuous member of rocky intertidal communities extending through the northern shore of Cape Cod, Massachusetts. The origin of northern C. fragilis is debated. It may have spread to New England from the northern end of its historic range through larval transport by ocean currents, possibly mediated by the construction of piers, marinas, and other anthropogenic structures that provided new hard substrate habitat. Alternatively, it may have been introduced by fouling on ships originating farther south in its historic distribution. Here we examine mitochondrial cytochrome c oxidase I sequence diversity and the distribution of mitochondrial haplotypes of C. fragilis from 11 localities ranging from Cape Cod, to Tampa Bay, Florida. We found significant genetic structure between northern and southern populations. Phylogenetic analysis revealed three well-supported reciprocally monophyletic haplogroups, including one haplogroup that is restricted to New England and Virginia populations. While the distances between clades do not suggest cryptic speciation, selection and dispersal barriers may be driving the observed structure. Our data are consistent with an expansion of C. fragilis from the northern end of its mid-19th century range into Massachusetts.
    Description: Funding was provided by the Woods Hole Oceanographic Institution in an Independent Study Award to J Pineda and AF Govindarajan, a WHOI summer fellowship to F Bukša, and NSF Biological Oceanography #1029526 to JP Wares.
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 4
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    Copernicus Publications on behalf of the European Geosciences Union
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Ecology Progress Series 595 (2018): 105-122, doi:10.3354/meps12561.
    Description: Vertical and cross-shore distributions and abundances of shallow-water barnacle larvae were characterized in La Jolla, southern California (USA), during a 2 yr period. Five stations located within 1 km of shore and ranging from 4-12 m water depths were sampled intensively in 2 m depth intervals during 27 cruises throughout spring-summer (April-July) and fall-winter (October-December) of 2014 and 2015. Larval abundances significantly decreased from 2014 to 2015, which could be related to the arrival of a warm-water anomaly (the so-called ‘Blob’) in 2014 and El Niño conditions in 2015. Despite the presence of these large-scale regional disturbances, vertical and cross-shore larval distributions were consistent throughout the 2 yr study period. Early-stage nauplii and Chthamalus fissus cyprids tracked bottom depth, and cyprids were on average deeper than nauplii. Vertical distributions were not related to the mid-depth of the thermocline or thermal stratification. Early-stage nauplii had a broader cross-shore distribution than cyprids, which were concentrated at inshore stations. Nearshore cyprid concentration had a positive relationship with thermal stratification, and the center of distribution of cyprids was farther offshore during fall-winter when stratification decreased. These results suggest that thermal stratification elicits enhanced behavioral control of cyprids to remain close to shore and reach the adult habitat.
    Description: This material is based upon work supported by the National Science Foundation under grants OCE-1357290, OCE-1357327, OCE-1630459, and OCE- 1630474. Support was also provided by the University of San Diego and Woods Hole Oceanographic Institution.
    Keywords: Barnacle larvae ; Chthamalus fissus ; Early-stage nauplii ; Cyprids ; Hydrographic and hydrodynamic conditions
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 1360–1376, doi:10.1002/2015JC011141.
    Description: Current dynamics across a platform reef in the Red Sea near Jeddah, Saudi Arabia, are examined using 18 months of current profile, pressure, surface wave, and wind observations. The platform reef is 700 m long, 200 m across with spatial and temporal variations in water depth over the reef ranging from 0.6 to 1.6 m. Surface waves breaking at the seaward edge of the reef cause a 2–10 cm setup of sea level that drives cross-reef currents of 5–20 cm s−1. Bottom stress is a significant component of the wave setup balance in the surf zone. Over the reef flat, where waves are not breaking, the cross-reef pressure gradient associated with wave setup is balanced by bottom stress. The quadratic drag coefficient for the depth-average flow decreases with increasing water depth from Cda = 0.17 in 0.4 m of water to Cda = 0.03 in 1.2 m of water. The observed dependence of the drag coefficient on water depth is consistent with open-channel flow theory and a hydrodynamic roughness of zo = 0.06 m. A simple one-dimensional model driven by incident surface waves and wind stress accurately reproduces the observed depth-averaged cross-reef currents and a portion of the weaker along-reef currents over the focus reef and two other Red Sea platform reefs. The model indicates the cross-reef current is wave forced and the along-reef current is partially wind forced.
    Description: This research is based on work supported by awards USA 00002 and KSA 00011 KAUST. K. Davis was supported by a WHOI Postdoctoral Fellowship. T. Farrar was partly supported by NSF grant OCE-1435665. S. Lentz was partly supported by NSF grants OCE-1332646 and OCE-1357290.
    Description: 2016-08-16
    Keywords: Red Sea ; Coral reef ; Circulation ; Waves
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 6
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hagerty, M. L., Reyns, N., Pineda, J., & Govindarajan, A. F. Diversity and distribution of nearshore barnacle cyprids in southern California through the 2015-16 El Nino. Peerj, 7, (2019): e7186, doi: 10.7717/peerj.7186.
    Description: Abundance, species diversity, and horizontal distributions of barnacle cyprids offshore of La Jolla, southern California were described from May 2014 to August 2016 to determine how the nearshore barnacle larval assemblage changed before, during, and after the 2015–16 El Niño. The entire water column was sampled at five stations located within one km of shore with water depths of 4, 6, 8, 10, and 12 m during 33 cruises that encompassed the time when El Niño conditions impacted the area. Nearshore temperature and thermal stratification was concurrently measured using a CTD. Six identified cyprid species, including Chthamalus fissus, Pollicipes polymerus, Megabalanus rosa, Tetraclita rubescens, Balanus glandula, and B. trigonus, along with four unknown species, were collected in our samples. DNA barcoding was used to confirm identifications in a subset of the larvae. C. fissus was more than eight times more abundant than any other species, and while abundance varied by species, cyprid density was highest for all species except for M. rosa before and after the El Niño event, and lower during the environmental disturbance. There were significant differences in cross-shore distributions among cyprid species, with some located farther offshore than others, along with variability in cross-shore distributions by season. C. fissus cyprids were closest to shore during spring-summer cruises when waters were the most thermally stratified, which supports previous findings that C. fissus cyprids are constrained nearshore when thermal stratification is high. Relative species proportions varied throughout the study, but there was no obvious change in species assemblage or richness associated with El Niño. We speculate that barnacle cyprid species diversity did not increase at our study site during the 2015–16 El Niño, as it has in other areas during previous El Niño Southern Oscillation events, due to the lack of anomalous northward flow throughout the 2015–16 event.
    Description: Funding for this project was provided by the National Science Foundation under grants OCE-1357290, OCE-1357327, OCE-1630459, and OCE-1630474, with supplemental funding provided by the University of San Diego and Woods Hole Oceanographic Institution. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
    Keywords: Barnacle cyprids ; Chthamalus fissus ; DNA barcoding ; El Niño ; Larvae ; Species diversity
    Repository Name: Woods Hole Open Access Server
    Type: Article
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