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  • American Association for Cancer Research (AACR)  (2)
  • 2015-2019  (2)
  • 2017  (2)
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  • American Association for Cancer Research (AACR)  (2)
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  • 2015-2019  (2)
Year
  • 2017  (2)
Subjects(RVK)
  • 1
    Online Resource
    Online Resource
    American Association for Cancer Research (AACR) ; 2017
    In:  Cancer Research Vol. 77, No. 13_Supplement ( 2017-07-01), p. 3420-3420
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 77, No. 13_Supplement ( 2017-07-01), p. 3420-3420
    Abstract: Background: Family with sequence similarity 134B (FAM134B) is an ER-autophagy regulator and involved in the pathogenesis of neuronal disorders, vascular diseases and carcinomas. In colorectal carcinomas, FAM134B plays important role in the pathogenesis and associated with aggressiveness of the disease. However, the frequency of mutations, expression pattern and functional roles in cell have never been studied in colorectal cancer. Objectives: To investigate FAM134B mutations in tissues samples from patients with colorectal cancer and cell lines. Also, the expression of FAM134B at protein and mRNA levels were examined. In addition, functional roles of FAM134B in colon cancer were studied. Methods: Mutations in FAM134B sequence in eighty-eight cancer tissues and matched non-cancer samples was studied by high-resolution melt curve analysis followed by Sanger sequencing. FAM134B expression was studied and quantified in cell lines and cancer tissues samples using immunofluorescence, immunocytochemistry, Western blot and real-time PCR. In vitro functional assays were performed to unveil the molecular roles of FAM134B in colon cancer pathogenesis followed by shRNA-mediated silencing in cells. Mouse xenotransplantation model was used to confirm the functional behavior of FAM134B in colon cancer. Results: In this study, 46.5% (41/88) patients with colorectal cancer were identified as FAM134B mutations positive. Thirty-one novel pathogenic mutations were detected. Of the 31 mutations, 8 novel frameshift mutations caused nonsense-mediated mRNA decay and associated with gender of the patients, presence of metachronous cancer, size, T staging, presence of distant metastases and positivity of microsatellite instability (MSI) in the cancer (p & lt; 0.05). FAM134B expression in cancer cells derived from advanced stages (stage III; SW48 and stage IV; HCT116) of colon cancer was significantly (p & lt;0.01) reduced when compared to non-neoplastic colon cells (FHC) and cancer cells derived from stage II colon cancer (SW480). Expression of FAM134B mRNA in cancer tissues was noted significantly (p & lt;0.001) downregulated when compared to that of non-cancer tissues samples. FAM134B suppression significantly (p & lt;0.05) increased the proliferation of colon cancer cells, remarkably increased (34-52%; p & lt;0.05) the clonogenic, migration capacity, and increases the proportion of cells in S phase of cell-cycle (p & lt;0.01). Xenotransplantation model showed that larger and higher-grade tumors were formed in mice treated with FAM134B knockdown cells. Conclusion: In vitro and in vivo functional studies implied that FAM134B acts as a cancer inhibitor in colon cancer. Also, FAM134B mutation is common in colorectal cancer and the association of mutation with adverse clinical and pathological parameters are in concur with the tumour suppressive property of the gene. Note: This abstract was not presented at the meeting. Citation Format: Farhadul Islam, Vinod Gopalan, Riajul Wahab, Katherine Ting-wei Lee, Afraa Mamoori, Cu-tai Lu, Robert A Smith, Alfred K-Y Lam. Mutational status, expression and functional behaviors of FAM134B in colorectal cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 3420. doi:10.1158/1538-7445.AM2017-3420
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
    RVK:
    RVK:
    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2017
    detail.hit.zdb_id: 2036785-5
    detail.hit.zdb_id: 1432-1
    detail.hit.zdb_id: 410466-3
    Location Call Number Limitation Availability
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  • 2
    Online Resource
    Online Resource
    American Association for Cancer Research (AACR) ; 2017
    In:  Cancer Research Vol. 77, No. 13_Supplement ( 2017-07-01), p. 1243-1243
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 77, No. 13_Supplement ( 2017-07-01), p. 1243-1243
    Abstract: Aim: The aim of this research was to detect novel sites of FAM134B mutations, copy number variations and their clinicopathological significance in esophageal squamous cell carcinoma (ESCC) patients. Also, this study was intended to develop a simple and inexpensive electrochemical detection method for the analysis of FAM134B mutations using a single-use and disposable screen-printed electrode. Method: Approximately 102 fresh tissue samples of ESCC and matched non-cancer adjacent tissues were recruited. The DNA copy numbers of FAM134B were initially studied by qRT-PCR. The FAM134B mutations were then quantified via high resolution melt curve (HRM) and Sanger sequencing analysis. In order to quantify the level of point mutation or SNPs in FAM134B gene, a new electrochemical method was also developed. The underlying working principle of the method is relied on the base dependent affinity interactions towards gold electrode. Since two DNA sequences with different DNA base compositions (i.e., amplified mutated sequences will be distinctly different than its wild type sequence) will have different adsorption affinity towards an unmodified gold electrode, accurate measurement of adsorbed DNA on the electrode surface will give the measure of point mutation or SNPs present in the DNA sequences. Target DNA sequences were first extracted from clinical samples and then PCR amplified and purified prior to adsorption on a single-use screen-printed gold electrode. The amount of mutation sites on a DNA sequence is quantified by monitoring the Faradaic current generated by the [Fe(CN)6]3-/4- system present in the electrolyte solution. Result: Amplification of FAM134B DNA was noted in 37% of ESCC tissues whereas 35% cases showed loss of FAM134B copies compared to matched non-tumor tissues. Overall, thirty-seven FAM134B mutations were documented in exons 4, 5, 7, 9 as well as introns 2, 4-8 of FAM134B. Also, FAM134B mutations were detected in all the metastatic ESCC cases and in 14% (8/57) of the primary ESCC. Using the new electrochemical method, we were able to detect mutations in 50 ng of target PCR-amplified product within 1 h with high reproducibility (% RSD= & lt;2) and specificity. Conclusion: DNA copy number variations and frequent mutations of FAM134B in metastatic lymph node tissues in ESCC patients indicate its critical role in the pathogenesis of ESCCs. Also the mutation detection via electrochemical methods was successful distinguishing single point mutation in DNA from oesophageal cancer implying its potential application in point mutation detection in clinical diagnostics. Note: This abstract was not presented at the meeting. Citation Format: Md. Hakimul Haque, Vinod Gopalan, Muhammad J. A. Shiddiky, Alfred K. Lam. FAM134B mutation in esophageal squamous cell carcinoma: Its clinical significance and quantification by electrochemical methods [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 1243. doi:10.1158/1538-7445.AM2017-1243
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
    RVK:
    RVK:
    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2017
    detail.hit.zdb_id: 2036785-5
    detail.hit.zdb_id: 1432-1
    detail.hit.zdb_id: 410466-3
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
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