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  • 1
    In: Biology Letters, The Royal Society, Vol. 10, No. 12 ( 2014-12), p. 20140698-
    Abstract: The desire to predict the consequences of global environmental change has been the driver towards more realistic models embracing the variability and uncertainties inherent in ecology. Statistical ecology has gelled over the past decade as a discipline that moves away from describing patterns towards modelling the ecological processes that generate these patterns. Following the fourth International Statistical Ecology Conference (1–4 July 2014) in Montpellier, France, we analyse current trends in statistical ecology. Important advances in the analysis of individual movement, and in the modelling of population dynamics and species distributions, are made possible by the increasing use of hierarchical and hidden process models. Exciting research perspectives include the development of methods to interpret citizen science data and of efficient, flexible computational algorithms for model fitting. Statistical ecology has come of age: it now provides a general and mathematically rigorous framework linking ecological theory and empirical data.
    Type of Medium: Online Resource
    ISSN: 1744-9561 , 1744-957X
    Language: English
    Publisher: The Royal Society
    Publication Date: 2014
    detail.hit.zdb_id: 2103283-X
    SSG: 12
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  • 2
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 71, No. 6 ( 2014-06), p. 847-877
    Abstract: Increased commercial importance of spiny dogfish (Squalus acanthias) combined with an often debated, and controversial, ecological impact has warranted an investigation of the relationship among distribution, environment, and prey to better understand the species ecology and inform management. To elucidate mechanisms behind distributional changes, we modeled seasonal occurrence and abundance of neonate, immature, and mature spiny dogfish as functions of abiotic and biotic factors using generalized additive models and Northeast Fisheries Science Center bottom trawl survey data. Significant nonlinear relationships were widespread throughout dogfish stages and seasons. Seasonal occurrence was tightly linked to depth and bottom temperature, with year and Julian day influential for some stages. While these factors also influenced abundance, ecological factors (e.g., squid abundances) significantly contributed to trends for many stages. Potential impacts of climate change were evaluated by forecasting distributions under different temperature scenarios, which revealed higher regional probabilities of occurrence for most stages during a warmer than average year. Our results can be used to better understand the relationship between sampling periods and movement drivers to survey catchability of the population in the Northeast (US) shelf large marine ecosystem.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2014
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2016
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 73, No. 7 ( 2016-07), p. 1031-1046
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 73, No. 7 ( 2016-07), p. 1031-1046
    Abstract: To effectively conserve and restore stream ecosystems, we need to better understand the distribution and abundance of individual fish species in relation to natural environments and anthropological stressors. In this study, we modeled the abundance of 97 fish species in small wadeable streams of Illinois, USA, based on random forests regression and landscape-level environmental variables. Model R 2 values for intermediately common species were higher than for common species, but highly variable among rare ones. Models for 50 species reached R 2 of 0.2–0.70 and were tested with a separate set of samples and applied to unsampled wadeable reaches to show the population hotspots of each species across the state. Furthermore, we evaluated the importance of individual environmental variables to a given fish species as well as the directional responses of each species to top 10 key predictors. Climate and land use were the best predictors for most species, followed by topography, geology, and soil permeability. Spatial connection of a stream also was associated with a large number of species. These findings improved our understanding of the relationships between fish species and landscape environments. The distribution maps could guide resource management, restoration, and monitoring of stream fish assemblages.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2016
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
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  • 4
    Online Resource
    Online Resource
    Elsevier BV ; 2014
    In:  Progress in Oceanography Vol. 129 ( 2014-12), p. 314-323
    In: Progress in Oceanography, Elsevier BV, Vol. 129 ( 2014-12), p. 314-323
    Type of Medium: Online Resource
    ISSN: 0079-6611
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2014
    detail.hit.zdb_id: 1497436-8
    detail.hit.zdb_id: 4062-9
    SSG: 21,3
    SSG: 14
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  • 5
    Online Resource
    Online Resource
    EDP Sciences ; 2009
    In:  Aquatic Living Resources Vol. 22, No. 2 ( 2009-04), p. 119-1
    In: Aquatic Living Resources, EDP Sciences, Vol. 22, No. 2 ( 2009-04), p. 119-1
    Type of Medium: Online Resource
    ISSN: 0990-7440 , 1765-2952
    Language: English
    Publisher: EDP Sciences
    Publication Date: 2009
    detail.hit.zdb_id: 2019083-9
    detail.hit.zdb_id: 291280-6
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    SSG: 21,3
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  • 6
    In: Journal of Applied Ecology, Wiley, Vol. 54, No. 5 ( 2017-10), p. 1373-1384
    Abstract: Shoreline armouring and overwater structures often compromise fish habitats. These threats to nearshore fish habitats will become more severe as growing coastal populations and rising sea levels increase demands for shoreline infrastructure. Our ability to assess and rehabilitate nearshore fish habitats along modified shorelines will be enhanced by: focusing research attention on metrics that directly indicate fish habitat quality; implementing and evaluating shoreline features that repair compromised habitat functions within human‐use constraints; collating natural history knowledge of nearshore ecosystems; and embracing the socio‐ecological nature of habitat improvements by educating the public about conservation efforts and fostering appreciation of local nearshore ecosystems. Actions to reduce impacts of shoreline modifications on fish are particularly feasible when they align with societal goals, such as improving flood protection and providing spaces that facilitate recreation, education, and connections between people and nature.
    Type of Medium: Online Resource
    ISSN: 0021-8901 , 1365-2664
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2017
    detail.hit.zdb_id: 2020408-5
    detail.hit.zdb_id: 410405-5
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  • 7
    In: Journal of Applied Ecology, Wiley, Vol. 57, No. 1 ( 2020-01), p. 77-84
    Abstract: Successful detection of introduced marine pests (IMP) relies upon effective surveillance. However, the expedience of responding following IMP detection is often dependent upon the relationship between regulators and stakeholders. Effective detection of IMP in areas such as commercial ports requires a collaborative approach, as port environments can be highly complex both above and below the water. This complexity can encompass physical, logistical, safety and legislative issues. With this in mind, the aquatic pest biosecurity section within the Department of Primary Industries and Regional Development (DPIRD) developed the State‐Wide Array Surveillance Program (SWASP) in collaboration with Western Australian Port Authorities and port industry stakeholders. The SWASP is primarily based on passive settlement arrays for IMP detection. Arrays are deployed at strategic locations within Ports. Marine growth samples collected from the arrays are processed using Next‐Generation Sequencing (NGS) to identify the presence of IMP within a specific geographical location. Over 8 years, participation in SWASP has grown from 3 to 11 ports, spanning over 11,000 km, from the tropical north to temperate south of Western Australia. The programme has proven to be highly effective as a means of fostering stakeholder involvement and, importantly for IMP surveillance. The growth and success of SWASP has continued primarily because of the commitment and farsightedness of the ports involved. The regular presence of the biosecurity regulator as a partner in SWASP has provided a consistent face for biosecurity and fostered good stakeholder relationships, ensuring there is a reliable and effective ongoing marine surveillance programme for the state. Synthesis and applications. Through a united and collaborative approach to marine biosecurity surveillance, port authorities, industry and biosecurity regulators have developed the State‐Wide Array Surveillance Program (SWASP) and closed a major gap in biosecurity surveillance. The SWASP collaboration uses passive settlement arrays and molecular analyses to provide regular marine pest surveillance from the tropics to temperate regions of Western Australia. The continued commitment has embedded valuable relationships between stakeholder and regulator ensuring ongoing surveillance in marine biosecurity for the state. The Western Australian SWASP example has inspired other jurisdictions around Australia to develop similar collaborative approaches which will have far‐reaching marine biosecurity benefits.
    Type of Medium: Online Resource
    ISSN: 0021-8901 , 1365-2664
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2020
    detail.hit.zdb_id: 2020408-5
    detail.hit.zdb_id: 410405-5
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  • 8
    In: Journal of Applied Ecology, Wiley, Vol. 58, No. 3 ( 2021-03), p. 576-586
    Abstract: Cumulative impact assessment (CIA) is a promising approach to guide marine spatial planning (MSP) and management. One limitation of CIA is the neglect of seascape connectivity, which may spread the impact of localized pressures to ambient areas, e.g. through lost dispersal and recruitment of organisms. We here, for the first time, incorporate seascape connectivity into a traditional CIA model using a connectivity matrix, exemplified by dispersal of propagules estimated through biophysical modelling. Two connectivity impacts are identified: the source impact represents downstream areas losing recruits because of reduced larval dispersal from sites affected by the pressure, and the sink impact represents loss of recruits originating from upstream areas prevented from settlement in the site affected by the local pressure. By including seascape connectivity in the Swedish MSP‐guiding CIA tool Symphony we demonstrate how to practically account for remote effects of local environmental impact. Our example on blue mussel shows how reducing mussel fitness in a given area may have impacts on mussels far from the acting pressures. Overall, results indicate that connectivity impact for blue mussels plays a minor role in most areas, 〈 10% of the ordinary cumulative impact. However, in some smaller areas, e.g. on offshore banks and the Danish Straits, seascape connectivity may increase ordinary cumulative impact with 20%–30%. In an example of scenario‐based CIA analyses of MSP projections, we demonstrate how impacts of particular management actions, e.g. shipping rerouting and wind power developments, can be tracked far from the original area of influence. Depending on the dispersal ability of ecosystem components, a local pressure may impact a considerable area through seascape connectivity, transgressing management units and national borders. Although the mean connectivity impact may be modest for a single ecosystem component, the consideration of seascape connectivity across multiple ecosystem components may significantly alter the mapping of cumulative impact and the assessment of different MSP scenarios. Synthesis and applications . Our extension of Cumulative Impact Assessment offers a new method for mapping and practically integrating seascape connectivity with ecosystem‐based MSP and other spatial instruments for policy making, such as marine protected areas.
    Type of Medium: Online Resource
    ISSN: 0021-8901 , 1365-2664
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2021
    detail.hit.zdb_id: 2020408-5
    detail.hit.zdb_id: 410405-5
    SSG: 12
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  • 9
    Online Resource
    Online Resource
    Acoustical Society of America (ASA) ; 2006
    In:  The Journal of the Acoustical Society of America Vol. 120, No. 5_Supplement ( 2006-11-01), p. 3017-3017
    In: The Journal of the Acoustical Society of America, Acoustical Society of America (ASA), Vol. 120, No. 5_Supplement ( 2006-11-01), p. 3017-3017
    Abstract: Multibeam echo-sounders and sonars are increasingly used in fisheries acoustics for studying school structure and behavior and for abundance estimation. However, data quality and a poor signal-to-noise ratio obtained with the existing multibeam echo-sounders preclude quantitative biomass estimation as carried out with the traditional single beam echo-sounders. In order to overcome these shortcomings, Ifremer and Simrad AS started in 2003 the development of the new and highly flexible calibrated multibeam echo-sounder ME70 designed for studying a wide range of scientific questions. This paper will present the full functionalities of the ME70 and preliminary results obtained with the system installed onboard the research vessel Thalassa. It will also provide first indications of its performance. Data have been collected on small pelagic fish species in the bay of Biscay, using simultaneously the traditional single beam echo-sounders and the ME70 with different beam configurations. Preliminary comparisons of fish school descriptors and biomass estimates based on single- and multibeam data allow us to quantify the effect of the gain in sampling coverage and the high angular resolution of the new system.
    Type of Medium: Online Resource
    ISSN: 0001-4966 , 1520-8524
    RVK:
    Language: English
    Publisher: Acoustical Society of America (ASA)
    Publication Date: 2006
    detail.hit.zdb_id: 1461063-2
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  • 10
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2015
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 72, No. 7 ( 2015-07), p. 1024-1036
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 72, No. 7 ( 2015-07), p. 1024-1036
    Abstract: Quantifying catch has been recognized worldwide as a critical component in fisheries management. Assessment of discard is challenging because of the requirement for at-sea observation, which is both logistically difficult and costly to fishery agencies. Statistical estimators using robust sampling methods may yield accurate and imprecise estimates given the variability associated with many at-sea discard species and inability for agencies to obtain high sampling fractions. However, biased estimates occur if an inappropriate estimator is used. Using Alaska trawl fisheries as an example, we investigated the statistical properties and implementation issues for three commonly used estimators: the ratio estimator; a simple mean estimator; and a deterministic imputation method currently in use in federal fisheries off Alaska. We used a simulation approach to evaluate the performance of these estimators to estimate trip-specific catch. Several statistical properties were evaluated: bias of the estimators, variability of the estimators, and accuracy of the variance estimators. The simple mean estimator had the best performance for vessels landing catch at shoreside processors. The choice of estimator was less clear for vessels processing catch, owing to sensitivity associated with species composition and implementation issues for the simple mean and ratio estimators.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2015
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    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
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