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  • Tan, Suh Nih  (2)
  • Biology  (2)
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  • Biology  (2)
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  • 1
    In: Journal of Phycology, Wiley, Vol. 52, No. 6 ( 2016-12), p. 973-989
    Abstract: Forty‐eight isolates of Pseudo ‐ nitzschia species were established from the Miri coast of Sarawak (Malaysian Borneo) and underwent TEM observation and molecular characterization. Ten species were found: P. abrensis , P. batesiana , P. fukuyoi , P. kodamae , P. lundholmiae , P. multistriata , P. pungens , P. subfraudulenta , as well as two additional new morphotypes, herein designated as P. bipertita sp. nov. and P .  limii sp. nov. This is the first report of P. abrensis , P. batesiana , P. kodamae , P. fukuyoi , and P. lundholmiae in coastal waters of Malaysian Borneo. Pseudo‐nitzschia bipertita differs from its congeners by the number of sectors that divide the poroids, densities of band striae, and its cingular band structure. Pseudo‐nitzschia limii , a pseudo‐cryptic species in the P. pseudodelicatissima complex sensu lato, is distinct by having wider proximal and distal mantles, a higher number of striae, and greater poroid height in the striae of the valvocopula. The species were further supported by the phylogenetic reconstructions of the nuclear‐encoded large subunit ribosomal gene and the second internal transcribed spacer. Phylogenetically, P. bipertita clustered with its sister taxa ( P. subpacifica + P. heimii ); P .  limii appears as a sister taxon to P. kodamae and P. hasleana in the ITS 2 tree. Pairwise comparison of ITS 2 transcripts with its closest relatives revealed the presence of both hemi‐ and compensatory base changes. Toxicity analysis showed detectable levels of domoic acid in  P. abrensis , P. batesiana , P. lundholmiae , and P. subfraudulenta , but both new species tested below the detection limit.
    Type of Medium: Online Resource
    ISSN: 0022-3646 , 1529-8817
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2016
    detail.hit.zdb_id: 281226-5
    detail.hit.zdb_id: 1478748-9
    SSG: 12
    Location Call Number Limitation Availability
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  • 2
    In: Journal of Phycology, Wiley, Vol. 54, No. 2 ( 2018-04), p. 234-248
    Abstract: Analyses of the mitochondrial cox1 , the nuclear‐encoded large subunit ( LSU ), and the internal transcribed spacer 2 ( ITS 2) RNA coding region of Pseudo‐nitzschia revealed that the P. pseudodelicatissima complex can be phylogenetically grouped into three distinct clades (Groups I–III), while the P. delicatissima complex forms another distinct clade (Group IV) in both the LSU and ITS 2 phylogenetic trees. It was elucidated that comprehensive taxon sampling (sampling of sequences), selection of appropriate target genes and outgroup, and alignment strategies influenced the phylogenetic accuracy. Based on the genetic divergence, ITS 2 resulted in the most resolved trees, followed by cox1 and LSU . The morphological characters available for Pseudo‐nitzschia , although limited in number, were overall in agreement with the phylogenies when mapped onto the ITS 2 tree. Information on the presence/absence of a central nodule, number of rows of poroids in each stria, and of sectors dividing the poroids mapped onto the ITS 2 tree revealed the evolution of the recently diverged species. The morphologically based species complexes showed evolutionary relevance in agreement with molecular phylogeny inferred from ITS 2 sequence–structure data. The data set of the hypervariable region of ITS 2 improved the phylogenetic inference compared to the cox1 and LSU data sets. The taxonomic status of P. cuspidata and P. pseudodelicatissima requires further elucidation.
    Type of Medium: Online Resource
    ISSN: 0022-3646 , 1529-8817
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2018
    detail.hit.zdb_id: 281226-5
    detail.hit.zdb_id: 1478748-9
    SSG: 12
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
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