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  • 1
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 1999
    In:  Current Microbiology Vol. 38, No. 2 ( 1999-2-1), p. 80-85
    In: Current Microbiology, Springer Science and Business Media LLC, Vol. 38, No. 2 ( 1999-2-1), p. 80-85
    Type of Medium: Online Resource
    ISSN: 0343-8651 , 1432-0991
    Language: Unknown
    Publisher: Springer Science and Business Media LLC
    Publication Date: 1999
    detail.hit.zdb_id: 1458987-4
    SSG: 12
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  • 2
    In: BMC Biology, Springer Science and Business Media LLC, Vol. 18, No. 1 ( 2020-12)
    Abstract: It is widely assumed that all mutant microorganisms present in a culture are able to grow and form colonies, provided that they express the features required for selection. Unlike wild-type Escherichia coli , PHO-constitutive mutants overexpress alkaline phosphatase and hence can hydrolyze glycerol-2-phosphate (G2P) to glycerol and form colonies on plates having G2P as the sole carbon source. These mutations mostly occur in the pst operon. However, the frequency of PHO-constitutive colonies on the G2P selective plate is exceptionally low. Results We show that the rate in which spontaneous PHO-constitutive mutations emerge is about 8.0 × 10 −6 /generation, a relatively high rate, but the growth of most existing mutants is inhibited by their neighboring wild-type cells. This inhibition is elicited only by non-mutant viable bacteria that can take up and metabolize glycerol formed by the mutants. Evidence indicates that the few mutants that do form colonies derive from microclusters of mutants on the selective plate. A mathematical model that describes the fate of the wild-type and mutant populations under these circumstances supports these results. Conclusion This scenario in which neither the wild-type nor the majority of the mutants are able to grow resembles an unavoidable “tragedy of the commons” case which results in the collapse of the majority of the population. Cooperation between rare adjacent mutants enables them to overcome the competition and eventually form mutant colonies. The inhibition of PHO-constitutive mutants provides an example of mutant frequency masked by orders of magnitude due to a competition between mutants and their ancestral wild-type cells. Similar “tragedy of the commons-like” cases may occur in other settings and should be taken into consideration while estimating true mutant frequencies and mutation rates.
    Type of Medium: Online Resource
    ISSN: 1741-7007
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2020
    detail.hit.zdb_id: 2133020-7
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Microbiology Society ; 2004
    In:  Microbiology Vol. 150, No. 9 ( 2004-09-01), p. 2985-2992
    In: Microbiology, Microbiology Society, Vol. 150, No. 9 ( 2004-09-01), p. 2985-2992
    Abstract: The RNA polymerase core associated with σ S transcribes many genes related to stress or to the stationary phase. When cells enter a phase of phosphate starvation, the transcription of several genes and operons, collectively known as the PHO regulon, is strongly induced. The promoters of the PHO genes hitherto analysed are recognized by σ D -associated RNA polymerase. A mutation in the gene that encodes σ S , rpoS , significantly increases the level of alkaline phosphatase activity and the overproduction of σ S inhibits it. Other PHO genes such as phoE and ugpB are likewise affected by σ S . In contrast, pstS , which encodes a periplasmic phosphate-binding protein and is a negative regulator of PHO, is stimulated by σ S . The effect of σ S on the PHO genes is at the transcriptional level. It is shown that a cytosine residue at position −13 is important for the positive effect of σ S on pst . The interpretation of these observations is based on the competition between σ S and σ D for the binding to the core RNA polymerase.
    Type of Medium: Online Resource
    ISSN: 1350-0872 , 1465-2080
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2004
    detail.hit.zdb_id: 2008736-6
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    American Society for Microbiology ; 2015
    In:  Journal of Bacteriology Vol. 197, No. 8 ( 2015-04-15), p. 1378-1385
    In: Journal of Bacteriology, American Society for Microbiology, Vol. 197, No. 8 ( 2015-04-15), p. 1378-1385
    Abstract: Mutations that cause the constitutive expression of the PHO regulon of Escherichia coli occur either in the pst operon or in the phoR gene, which encode, respectively, a high-affinity P i transport system and a histidine kinase sensor protein. These mutations are normally selected on glycerol-2-phosphate (G2P) as the carbon source in the presence of excess P i . The emergence of early PHO-constitutive mutants, which appear after growth for up to 48 h on selective medium, depends on the presence of phoA , which codes for a periplasmic alkaline phosphatase, while late mutants, which appear after 48 h, depend both on phoA and on the ugp operon, which encodes a glycerophosphodiester transport system. The emergence of the late mutants hints at an adaptive mutation process. PHO-constitutive phoR mutants appear only in a host that is mutated in pitA , which encodes an alternative P i transport system that does not belong to the PHO regulon. The conserved Thr 217 residue in the PhoR protein is essential for PHO repression. IMPORTANCE One of the principal ways in which bacteria adapt to new nutrient sources is by acquiring mutations in key regulatory genes. The inability of E. coli to grow on G2P as a carbon source is used to select mutations that derepress the PHO regulon, a system of genes involved in the uptake of phosphorus-containing molecules. Mutations in the pst operon or in phoR result in the constitutive expression of the entire PHO regulon, including alkaline phosphatase, which hydrolyzes G2P. Here we demonstrate that the ugp operon, another member of the PHO regulon, is important for the selection of PHO-constitutive mutants under prolonged nutritional stress and that phoR mutations can be selected only in bacteria lacking pitA , which encodes a secondary P i transport system.
    Type of Medium: Online Resource
    ISSN: 0021-9193 , 1098-5530
    Language: English
    Publisher: American Society for Microbiology
    Publication Date: 2015
    detail.hit.zdb_id: 1481988-0
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2006
    In:  Archives of Microbiology Vol. 185, No. 3 ( 2006-4), p. 234-237
    In: Archives of Microbiology, Springer Science and Business Media LLC, Vol. 185, No. 3 ( 2006-4), p. 234-237
    Type of Medium: Online Resource
    ISSN: 0302-8933 , 1432-072X
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2006
    detail.hit.zdb_id: 1458451-7
    detail.hit.zdb_id: 477-7
    detail.hit.zdb_id: 124824-8
    SSG: 12
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  • 6
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2010
    In:  Molecular Genetics and Genomics Vol. 284, No. 6 ( 2010-12), p. 489-498
    In: Molecular Genetics and Genomics, Springer Science and Business Media LLC, Vol. 284, No. 6 ( 2010-12), p. 489-498
    Type of Medium: Online Resource
    ISSN: 1617-4615 , 1617-4623
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2010
    detail.hit.zdb_id: 1462070-4
    SSG: 12
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