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  • Pyper, Brian J  (10)
  • 1
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1999
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 56, No. 10 ( 1999-10-01), p. 1716-1720
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 56, No. 10 ( 1999-10-01), p. 1716-1720
    Abstract: Body length of adult Pacific sockeye salmon (Oncorhynchus nerka) has decreased significantly in recent years. We used 69 time series of age-specific body-length data (1967-1997) for 30 sockeye salmon stocks from southern British Columbia to western Alaska to test hypotheses about the effects of oceanographic conditions and competition on growth rate of sockeye salmon. Using principal components analysis (PCA), we constructed a single time series (PC1) that represented the dominant pattern of variability in length-at-age shared among these stocks. Taking into account time trends and autocorrelation in residuals, we found that increases in total Gulf of Alaska sockeye abundance and increases in sea-surface temperature (SST) across the Gulf of Alaska were significantly associated with reduced adult body length. Abundance and SST together accounted for 71% of the variability in PC1. Although researchers have documented increases in both abundance of sockeye salmon and their food in the northeastern Pacific Ocean over the last few decades, it is possible that increased food was more than offset by increased sockeye abundance, leading to greater competition and reduced body size.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1999
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 2
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1998
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 55, No. 9 ( 1998-09-01), p. 2127-2140
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 55, No. 9 ( 1998-09-01), p. 2127-2140
    Abstract: Autocorrelation in fish recruitment and environmental data can complicate statistical inference in correlation analyses. To address this problem, researchers often either adjust hypothesis testing procedures (e.g., adjust degrees of freedom) to account for autocorrelation or remove the autocorrelation using prewhitening or first-differencing before analysis. However, the effectiveness of methods that adjust hypothesis testing procedures has not yet been fully explored quantitatively. We therefore compared several adjustment methods via Monte Carlo simulation and found that a modified version of these methods kept Type I error rates near . In contrast, methods that remove autocorrelation control Type I error rates well but may in some circumstances increase Type II error rates (probability of failing to detect some environmental effect) and hence reduce statistical power, in comparison with adjusting the test procedure. Specifically, our Monte Carlo simulations show that prewhitening and especially first-differencing decrease power in the common situations where low-frequency (slowly changing) processes are important sources of covariation in fish recruitment or in environmental variables. Conversely, removing autocorrelation can increase power when low-frequency processes account for only some of the covariation. We therefore recommend that researchers carefully consider the importance of different time scales of variability when analyzing autocorrelated data.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1998
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 3
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2002
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 59, No. 3 ( 2002-03-01), p. 456-463
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 59, No. 3 ( 2002-03-01), p. 456-463
    Abstract: To improve the understanding of linkages between ocean conditions and salmon productivity, we estimated effects of ocean temperature on survival rates of three species of Pacific salmon (Oncorhynchus spp.) across 120 stocks. This multistock approach permitted more precise estimates of effects than standard single-stock analyses. The estimated effects were opposite in sign between northern and southern stocks and were quite consistent across stocks within species and areas. Warm anomalies in coastal temperatures were associated with increased survival rates for stocks in Alaska and decreased survival rates in Washington and British Columbia, suggesting that different mechanisms determine survival rates in the two areas. Regional-scale sea surface temperatures (SST, within several hundred kilometres of a stock's ocean entry point) were a much better predictor of survival rates than large-scale climate anomalies associated with the Pacific Decadal Oscillation (PDO), suggesting that survival rates are primarily linked to environmental conditions at regional spatial scales. With appropriate cautions, these results may be used to predict the potential effects of climatic changes on salmon productivity in different areas of the Northeast Pacific.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2002
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 4
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2000
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 57, No. 1 ( 2000-01-01), p. 181-191
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 57, No. 1 ( 2000-01-01), p. 181-191
    Abstract: Pacific salmon (Oncorhynchus spp.) populations can experience persistent changes in productivity, possibly due to climatic shifts. Management agencies need to rapidly and reliably detect such changes to avoid costly suboptimal harvests or depletion of stocks. However, given the inherent variability of salmon populations, it is difficult to detect changes quickly, let alone forecast them. We therefore compared three methods of annually updating estimates of stock-recruitment parameters: standard linear regression, Walters' bias-corrected regression, and a Kalman filter. We used Monte Carlo simulations that hypothesized a wide range of future climate-induced changes in the Ricker a parameter of a salmon stock. We then used each parameter estimation method on the simulated stock and recruitment data and set escapement targets and harvest goals accordingly. In these situations with a time-varying true Ricker a parameter, Kalman filter estimation resulted in greater mean cumulative catch than was produced by the standard linear regression approach, Walters' bias correction method, or a fixed harvest rate policy. This benefit of the Kalman filter resulted from its better ability to track changing parameter values, thereby producing escapements closer to the optimal escapement each year. However, errors in implementing desired management actions can significantly reduce benefits from all parameter estimation techniques.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2000
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 5
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1999
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 56, No. 6 ( 1999-06-01), p. 1046-1057
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 56, No. 6 ( 1999-06-01), p. 1046-1057
    Abstract: We examined patterns of covariation in age-specific adult body length and in mean age at maturity among 31 sockeye salmon (Oncorhynchus nerka) stocks from western Alaska to southern British Columbia. Positive covariation in body length was prevalent across stocks of all regions (e.g., correlations (r) from 0.2 to 0.6), suggesting either that growth periods critical to final body length of sockeye salmon occur while ocean distributions of these stocks overlap or that large-scale environmental processes influence these stocks similarly while they do not overlap. We also found stronger covariation among body length of stocks within regions (r from 0.4 to 0.7), indicating that unique regional-scale processes were also important. Mean age at maturity also showed positive covariation both among and within regions, but correlations were weaker than those for length. We also examined patterns of covariation between length and mean age at maturity and between these variables and survival rate. Although length and mean age at maturity were negatively correlated, there was little evidence of covariation between these variables and survival rate, suggesting that environmental processes that influence marine survival rates of sockeye salmon are largely different from those affecting size and age at maturity.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1999
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 6
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1998
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 55, No. 12 ( 1998-12-01), p. 2710-
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 55, No. 12 ( 1998-12-01), p. 2710-
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1998
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 7
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2003
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 60, No. 6 ( 2003-06-01), p. 757-757
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 60, No. 6 ( 2003-06-01), p. 757-757
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2003
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 8
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2001
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 58, No. 8 ( 2001-08-01), p. 1501-1515
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 58, No. 8 ( 2001-08-01), p. 1501-1515
    Abstract: We examined spatial patterns of covariation in indices of survival rate (residuals from the best-fit stock- recruitment curve) across four decades among 43 wild pink salmon (Oncorhynchus gorbuscha) stocks from 14 geographical regions in Washington, British Columbia, and Alaska. We found strong evidence of positive covariation among stocks within each region and between certain adjacent regions (e.g., correlations from 0.3 to 0.7) but no evidence of covariation between stocks of distant regions (e.g., separated by 1000 km or more). This suggests that important environmental processes affecting temporal variation in survival rates of pink salmon from spawners to recruits operate at regional spatial scales rather than at the larger ocean basin scale. Based on limited fry abundance data, we found that this covariation in spawner-to-recruit survival rates may be strongly influenced by marine processes.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2001
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 9
    Online Resource
    Online Resource
    Canadian Science Publishing ; 2003
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 60, No. 7 ( 2003-07-01), p. 809-824
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 60, No. 7 ( 2003-07-01), p. 809-824
    Abstract: Fisheries scientists and managers are concerned about potential long-term, persistent changes in productivity of fish stocks that might result from future climatic changes or other alterations in aquatic systems. However, because of large natural variability and measurement error in fisheries data, such changes are usually difficult to detect until long after they occur. Previous research using numerous Monte Carlo simulation trials showed that a Kalman filter performed better than standard estimation techniques in detecting such trends in a timely manner. Therefore, we used historical data along with a Kalman filter that included a time-varying Ricker a parameter to reconstruct changes in productivity (recruits per spawner at a given spawner abundance) of eight Bristol Bay, Alaska, sockeye salmon (Oncorhynchus nerka) stocks over the past 40 years. Productivity generally increased for most stocks but varied widely for others and dramatically decreased in another. Such large changes in productivity are important for management. They greatly affected optimal spawner abundances and optimal exploitation rates, suggesting that in the future, scientists should consider using models with time-varying productivity parameters.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2003
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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  • 10
    Online Resource
    Online Resource
    Canadian Science Publishing ; 1998
    In:  Canadian Journal of Fisheries and Aquatic Sciences Vol. 55, No. 11 ( 1998-11-01), p. 2503-2517
    In: Canadian Journal of Fisheries and Aquatic Sciences, Canadian Science Publishing, Vol. 55, No. 11 ( 1998-11-01), p. 2503-2517
    Abstract: We used a multi-stock comparison to identify spatial and temporal characteristics of environmentally driven sources of variability across four decades in the productivity of 29 sockeye salmon (Oncorhynchus nerka) stocks from British Columbia (B.C.) and Alaska. We examined patterns of covariation among indices of survival rate (residuals from the best-fit stock-recruitment curve) and found positive covariation among Fraser River sockeye stocks (southern B.C.) and, to a greater extent, among Bristol Bay stocks (western Alaska) but no evidence of covariation between these two regions or with stocks of other regions in B.C. and Alaska. This indicates that important environmental processes affecting variation in sockeye survival rate from spawners to recruits operate at regional spatial scales, rather than at the larger, ocean-basin scale. The observed covariation in survival rates of Bristol Bay stocks appears to be due to a combination of both freshwater and, to a greater degree, marine processes. Bristol Bay sockeye stocks showed a dramatic and persistent increase in survival rates coinciding with the abrupt changes in the North Pacific environment in the mid-1970s; however, there was little evidence of a similar response for Fraser River stocks.
    Type of Medium: Online Resource
    ISSN: 0706-652X , 1205-7533
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 1998
    detail.hit.zdb_id: 7966-2
    detail.hit.zdb_id: 1473089-3
    SSG: 21,3
    SSG: 12
    Location Call Number Limitation Availability
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