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  • 1
    In: Blood Advances, American Society of Hematology, Vol. 5, No. 23 ( 2021-12-14), p. 5226-5238
    Abstract: Among the recently described subtypes in childhood B-lymphoblastic leukemia (B-ALL) were DUX4- and PAX5-altered (PAX5alt). By using whole transcriptome RNA sequencing in 377 children with B-ALL from the Malaysia-Singapore ALL 2003 (MS2003) and Malaysia-Singapore ALL 2010 (MS2010) studies, we found that, after hyperdiploid and ETV6-RUNX1, the third and fourth most common subtypes were DUX4 (n = 51; 14%) and PAX5alt (n = 36; 10%). DUX4 also formed the largest genetic subtype among patients with poor day-33 minimal residual disease (MRD; n = 12 of 44). But despite the poor MRD, outcome of DUX4 B-ALL was excellent (5-year cumulative risk of relapse [CIR], 8.9%; 95% confidence interval [CI] , 2.8%-19.5% and 5-year overall survival, 97.8%; 95% CI, 85.3%-99.7%). In MS2003, 21% of patients with DUX4 B-ALL had poor peripheral blood response to prednisolone at day 8, higher than other subtypes (8%; P = .03). In MS2010, with vincristine at day 1, no day-8 poor peripheral blood response was observed in the DUX4 subtype (P = .03). The PAX5alt group had an intermediate risk of relapse (5-year CIR, 18.1%) but when IKZF1 was not deleted, outcome was excellent with no relapse among 23 patients. Compared with MS2003, outcome of PAX5alt B-ALL with IKZF1 codeletion was improved by treatment intensification in MS2010 (5-year CIR, 80.0% vs 0%; P = .05). In conclusion, despite its poor initial response, DUX4 B-ALL had a favorable overall outcome, and the prognosis of PAX5alt was strongly dependent on IKZF1 codeletion.
    Type of Medium: Online Resource
    ISSN: 2473-9529 , 2473-9537
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2021
    detail.hit.zdb_id: 2876449-3
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  • 2
    In: Blood, American Society of Hematology, Vol. 106, No. 11 ( 2005-11-16), p. 1459-1459
    Abstract: MTHFR plays a key role in folate metabolism by shuttling one-carbon units between nucleotide synthesis and methylation reactions. Two frequent polymorphisms in the human MTHFR gene (C677T and A1298C) confer moderate functional impairment of MTHFR activity for homozygous mutant individuals. These polymorphisms have been inconclusively shown to confer some form of protection against development of cancer. We postulate that MTHFR polymorphisms influence risk of developing childhood ALL by comparing the frequency of these polymorphisms in normal controls and children with ALL in their specific races. As the frequencies of these polymorphisms are unknown in Chinese and Malays populations, we performed a population study among Chinese and Malay populations, and children with ALL. A total of 310 childhood ALL were enrolled between 1992–2005 (NUH-ALL 92, HK-ALL 98, MASPORE-ALL 2003). The cases comprise of 202 Chinese ALL (B-lineage=180, T-lineage=15, infant=7) and 108 Malay ALL (B-lineage=98, T-lineage=3, infant=7). A total of 231 cases (Ch=144, Mal=87) were screened for TEL-AML1 and MLL rearrangements using RT-PCR. Umblical cord bloods (anonymous) were used as controls. Genotyping was carried out using PCR/RFLP. The frequencies of MTHFR polymorphisms were distinctly different among the Chinese and Malay populations. 54.2% of the Chinese population was either heterozygous (45%) or homozygous (9.2%) for MTHFR C677T while only 25.5% of the Malay population were either heterozygous (23.9%) or homozygous (1.6%). The frequency of MTHFR C677T polymorphism among the ALL patients were significantly different from the normal population (Chinese p=0.01, Malay p= 0.068). Specifically, the frequencies of heterozygous and homozygous for C677T among ALL patients were lower compared to the normal population: Chinese ALL 33.7% and 8.9%; Malays ALL 15.7% and 1%. The protection against childhood ALL seems to be conferred to reducing the risk of developing TEL-AML1 subtype (Table 2). This may explain the reason why the frequency of TEL-AML1 subtype is lower among the Chinese compared to the Malays (24/144 [16.7%] Chinese vs 22/87 [25.3%] Malays). No significant association of MTHFR A1298C with risk of childhood ALL. Our findings suggested that MTHFR C677T significantly reduces the risk of developing childhood leukaemia especially those with onset in utero. Table 1: Frequency of the MTHFR C677T genotypes in childhood ALL and controls (A) Chinese Genotype Controls (n=262) ALL (n=202) OR(95%CI) p CC 119(45.4%) 116(57.4%) 1.0(referent) - CT or TT 143(54.2%) 86(42.6%) 1.6(1.1–2.3) 0.01 (B) Malays Controls(n=251) ALL(n=108) CC 187(74.5%) 90(83.3%) 1.0(referent) - CT or TT 64(25.5%) 18(16.7%) - 0.068 Table 2: Distribution of MTHFR C677T genotypes in the 3 subgroups. (A) Chinese Controls TEL-AML1 or MLL TEL-AML1 or MLL Hyperdiploidy Non-hyperderploidy Genotype (n=262) Present(n=32; MLL=8/32) Absent(n=112) (n=22) (n=50) CC 119(45.4%) 19(59.3%) 62(55.4%) 16(72.7%) 26(52%) CT or TT 143(54.2%) 13(40.6%) p=0.045 50(44.7%) p=0.129 6(27.3%) p 〈 0.0001 24(48%) p=0.24 (B) Malays Genotype Controls(n=251) Present(n=26; MLL=4/26) Absent(n=61) CC 187(74.5%) 24(92.3%) 48(78.7%) No Data No Data CT or TT 64(25.5%) 2(7.7%) p=0.001 13(21.3%) p=0.27
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2005
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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  • 3
    In: British Journal of Clinical Pharmacology, Wiley, Vol. 87, No. 4 ( 2021-04), p. 1990-1999
    Abstract: Vincristine (VCR) is a key drug in the successful multidrug chemotherapy for childhood acute lymphoblastic leukaemia (ALL). However, it remains unclear how VCR pharmacokinetics affects its antileukaemic efficacy. The objective of this study is to explore the VCR pharmacokinetic parameters and intracellular VCR levels in an up‐front window of Ma‐Spore ALL 2010 (MS2010) study. Methods We randomised 429 children with newly diagnosed ALL to 15‐minute vs 3‐hour infusion for the first dose of VCR to study if prolonging the first dose of VCR infusion improved response. In a subgroup of 115 B‐ALL and 20 T‐ALL patients, we performed VCR plasma ( n = 135 patients) and intracellular ( n = 66 patients) pharmacokinetic studies. The correlations between pharmacokinetic parameters and intracellular VCR levels with early treatment response, final outcome and ABCB1 genotypes were analysed. Results There was no significant difference between 15‐minute and 3‐hour infusion schedules in median Day 8 peripheral or bone marrow blast response. Plasma VCR pharmacokinetic parameters did not predict outcome. However, in B‐ALL, Day 33 minimal residual disease (MRD) negative patients and patients in continuous complete remission had significantly higher median intracellular VCR 24h levels ( P = .03 and P = .04, respectively). The median VCR 24h intracellular levels were similar among the common genetic subtypes of ALL ( P = .4). Patients homozygous for wild‐type ABCB1 2677GG had significantly higher median intracellular VCR 24h ( P = .04) than 2677TT. Conclusion We showed that in childhood B‐ALL, the intracellular VCR 24h levels in lymphoblasts affected treatment outcomes. The intracellular VCR 24h level was independent of leukaemia subtype but dependent on host ABCB1 G2677T genotype.
    Type of Medium: Online Resource
    ISSN: 0306-5251 , 1365-2125
    URL: Issue
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    Language: English
    Publisher: Wiley
    Publication Date: 2021
    detail.hit.zdb_id: 1498142-7
    SSG: 15,3
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  • 4
    In: Journal of Clinical Oncology, American Society of Clinical Oncology (ASCO), Vol. 41, No. 20 ( 2023-07-10), p. 3642-3651
    Abstract: Children with favorable-risk ALL can be successfully treated without anthracyclines.
    Type of Medium: Online Resource
    ISSN: 0732-183X , 1527-7755
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    Language: English
    Publisher: American Society of Clinical Oncology (ASCO)
    Publication Date: 2023
    detail.hit.zdb_id: 2005181-5
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  • 5
    In: Journal of Clinical Oncology, American Society of Clinical Oncology (ASCO), Vol. 30, No. 19 ( 2012-07-01), p. 2384-2392
    Abstract: To improve treatment outcome for childhood acute lymphoblastic leukemia (ALL), we designed the Malaysia-Singapore ALL 2003 study with treatment stratification based on presenting clinical and genetic features and minimal residual disease (MRD) levels measured by polymerase chain reaction targeting a single antigen-receptor gene rearrangement. Patients and Methods Five hundred fifty-six patients received risk-adapted therapy with a modified Berlin-Frankfurt-Münster–ALL treatment. High-risk ALL was defined by MRD ≥ 1 × 10 −3 at week 12 and/or poor prednisolone response, BCR-ABL1, MLL gene rearrangements, hypodiploid less than 45 chromosomes, or induction failure; standard-risk ALL was defined by MRD ≤ 1 × 10 −4 at weeks 5 and 12 and no extramedullary involvement or high-risk features. Intermediate-risk ALL included all remaining patients. Results Patients who lacked high-risk presenting features (85.7%) received remission induction therapy with dexamethasone, vincristine, and asparaginase, without anthracyclines. Six-year event-free survival (EFS) was 80.6% ± 3.5%; overall survival was 88.4% ± 3.1%. Standard-risk patients (n = 172; 31%) received significantly deintensified subsequent therapy without compromising EFS (93.2% ± 4.1%). High-risk patients (n = 101; 18%) had the worst EFS (51.8% ± 10%); EFS was 83.6% ± 4.9% in intermediate-risk patients (n = 283; 51%). Conclusion Our results demonstrate significant progress over previous trials in the region. Three-drug remission-induction therapy combined with MRD-based risk stratification to identify poor responders is an effective strategy for childhood ALL.
    Type of Medium: Online Resource
    ISSN: 0732-183X , 1527-7755
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    Language: English
    Publisher: American Society of Clinical Oncology (ASCO)
    Publication Date: 2012
    detail.hit.zdb_id: 2005181-5
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  • 6
    In: Leukemia, Springer Science and Business Media LLC, Vol. 34, No. 9 ( 2020-09), p. 2418-2429
    Type of Medium: Online Resource
    ISSN: 0887-6924 , 1476-5551
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    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2020
    detail.hit.zdb_id: 2008023-2
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  • 7
    In: Pediatric Hematology Oncology Journal, Elsevier BV, Vol. 5, No. 1 ( 2020-03), p. 11-16
    Type of Medium: Online Resource
    ISSN: 2468-1245
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2020
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  • 8
    In: Journal of Clinical Oncology, American Society of Clinical Oncology (ASCO), Vol. 36, No. 26 ( 2018-09-10), p. 2726-2735
    Abstract: Although IKZF1 deletion ( IKZF1 del ) confers a higher risk of relapse in childhood B-cell acute lymphoblastic leukemia (B-ALL), it is uncertain whether treatment intensification will reverse this risk and improve outcomes. The Malaysia-Singapore ALL 2010 study (MS2010) prospectively upgraded the risk assignment of patients with IKZF1 del to the next highest level and added imatinib to the treatment of all patients with BCR- ABL1 fusion. Patients and Methods In total, 823 patients with B-ALL treated in the Malyasia-Singapore ALL 2003 study (MS2003; n = 507) and MS2010 (n = 316) were screened for IKZF1 del using the multiplex ligation-dependent probe amplification assay. The impact of IKZF1 del on the 5-year cumulative incidence of relapse (CIR) was compared between the two studies. Results Patient characteristics were similar in both cohorts, including IKZF1 del frequencies (59 of 410 [14.4%] v 50 of 275 [18.2%] ; P = .2). In MS2003, where IKZF1 del was not used in risk assignment, IKZF1 del conferred a significantly higher 5-year CIR (30.4% v 8.1%; P = 8.7 × 10 −7 ), particularly in the intermediate-risk group who lacked high-risk features (25.0% v 7.5%; P = .01). For patients with BCR-ABL1–negative disease, IKZF1 del conferred a higher 5-year CIR (20.5% v 8.0%; P = .01). In MS2010, the 5-year CIR of patients with IKZF1 del significantly decreased to 13.5% ( P = .05) and no longer showed a significant difference in patients with BCR-ABL1-negative disease (11.4% v 4.4%; P = .09). The 5-year overall survival for patients with IKZF1 del improved from 69.6% in MS2003 to 91.6% in MS2010 ( P = .007). Conclusion Intensifying therapy for childhood B-ALL with IKZF1 del significantly reduced the risk of relapse and improved overall survival. Incorporating IKZF1 del screening significantly improved treatment outcomes in contemporary ALL therapy.
    Type of Medium: Online Resource
    ISSN: 0732-183X , 1527-7755
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    Language: English
    Publisher: American Society of Clinical Oncology (ASCO)
    Publication Date: 2018
    detail.hit.zdb_id: 2005181-5
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  • 9
    In: Blood, American Society of Hematology, Vol. 114, No. 22 ( 2009-11-20), p. 2624-2624
    Abstract: Abstract 2624 Poster Board II-600 Although childhood ALL is the prototype for a drug-responsive malignancy, some patients relapse or develop severe toxicity due to significant inter-individual variability. Leukemic factors like the molecular subtype account for the majority of the variation in prognosis; some studies have suggested that polymorphisms in key genes involved in drug transport, uptake, metabolism or targeting are responsible for smaller magnitude of variance in terms of therapeutic efficacy. Thus far, genetic characteristics are not widely applied in modern risk-stratifying system for ALL patients. And due to the significant differences of ethnic genotype/allele frequencies, the variance is probably much larger than leukemic factors alone. We integrated molecular and pharmacogenetic profiles to assess the contribution of germline variations in early treatment response using minimal residual disease MRD status in the Malaysia-Singapore ALL 2003 study. Three hundred and seventy children with ALL (200 Chinese and 170 Malays) were included and tested for t(12;21), t(9;22), t(1;19) and t(11q23)/MLL rearrangements. Genotypes of 20 polymorphisms in 11 different candidate genes were collected (Phase II enzymes: GSTM1, GSTT1, GSTP1, NQO1; folate metabolism: MTHFR, MTHFD1, TYMS, SLC19A1; transporter: ABCB1; candidates reported in other studies: CCR5, IL15). MRD levels were measured by real-time quantitative PCR at Week-5 (TP1, end-of-induction) and Week-12 (TP2) after the start of therapy. Chinese and Malays were analyzed separately to minimize confounding effect as most studied polymorphisms had significantly different genotype/allele frequencies between the two ethnic groups. All genotypes, together with patient characteristics of sex, leukemia lineage, molecular subtype and NCI risk group, were included as variables to build a prediction model using Classification and Regression Tree (CART) analysis. Patients with ≥0.1% TP1 MRD and ≥0.01% TP2 MRD had significantly shorter event-free survival (EFS) compared to those with undetectable MRD level ( 〈 0.01%) at two time-points respectively. Chi-squared test did not show significant association with MRD status for any studied polymorphism, indicating that no single pharmacogenetic factor was an independent predictor. CART analyses revealed particular conditions associated with good or poor MRD status at two time points respectively. In the Chinese, 1) patients carrying t(12;21) or t(1;19) have 1.3- and 1.6-fold of higher chances to have undetectable MRD at TP1 and TP2 respectively (P 〈 0.001); 2) at TP1, carriers of t(9;22) or 11q23/MLL rearrangements or those without common translocations but carrying both ABCB1 −2352G/A and SLC19A1 G/G have a 2.5-fold of higher risk for ≥0.1% MRD (P=0.005 and 0.001 respectively); and 3) at TP2, patients carrying t(9;22) or t(11q23)/MLL rearrangements or those without common translocations but simultaneously carrying SLC19A1 G-allele, GSTM1 present and IL15 rs17015014 C/C also have a 2.5-fold of higher risk for ≥0.01% MRD (P=0.017 and 0.006 respectively). In the Malays, 4) NCI high risk patient carrying IL15 rs17015014 C-allele have a 1.9-fold of higher risk for ≥0.1% TP1 MRD (P=0.004) whilst those carrying both GSTM1 null genotype and MTHFR 677C/T have a 3.6-fold of higher risk for ≥0.01% TP2 MRD (P 〈 0.001). Correct classification rates for all built models vary from 73.6% to 79.4%. Models built by using only genotypes or patient characteristics are inferior to the classifier consisting of both features. We conclude that inherited germline variations affect therapeutic efficacy but their importance vary in different races probably due to the differences in population frequencies. These pharmacogenetic factors rank below the more powerful leukemic factors such as molecular subtypes but provide a distinct albeit smaller impact. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2009
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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  • 10
    In: Blood, American Society of Hematology, Vol. 112, No. 11 ( 2008-11-16), p. 2551-2551
    Abstract: Background: Several large cohort studies–like from BFM and St Jude groups-have shown that minimal residual disease (MRD) is the single most important predictor of treatment outcome in childhood acute lymphoblastic leukemia. However, lingering concerns about clonal evolution of IgH/TCR rearrangements may result in false-negative MRD. Hence, the AIEOP-BFM ALL 2000 study utilized at least 2 sensitive MRD markers with at least 10−4 sensitivity for risk-stratification. This stringent minimum of 2 sensitive MRD markers criteria limits the applicability of MRD stratification to & lt;80% of patients and it is more costly and time consuming. The Malaysia-Singapore ALL 2003 study trial adopted a similar strategy of primarily early response assessment like Day-8 prednisolone response (PR) and a simplified methodology of at least one MRD marker (IgH/TCR) for risk stratification. We hypothesize that clonal evolution does not occur early during therapy and that a single marker PCR-based methodology is more informative and cost-effective, without hampering the accuracy of MRD risk stratification. Methods: A total of 362 patients (B-lineage=333, T-lineage=29) were enrolled in Ma-Spore ALL 2003 from July 2002 to August 2008, with a median age of 5.61 years (range 0.14 to 15.29). The treatment protocol is based on the modified BFM ALL 2000 backbone without randomization. Risk-stratification is based primarily on MRD levels at end of induction (Day-33) and week 12, Day-8 PR, and presence of BCR-ABL or MLL. In patients whom we are unable to quantify MRD, are assigned IR risk group. Screening for IgH/TCR rearrangements is carried out using multiplex BIOMED-2 primers (JJM van Dongen et al 2003) with standardization with the European MRD Study Group, which we are an active member. Selection of MRD markers is based on frequency and stability of IgH/TCR rearrangements. MRD quantifications were carried out using Real-time PCR (LightCycler 1.0, Roche Diagnostics). We define three distinct treatment subgroups: Standard-Risk (SR) who had MRD & lt;10−4 at both time-points; High-Risk (HR) who had poor PR or no clinical remission or BCR-ABL or infant MLL or MRD at week 12 & gt;1×10−3; remaining patients formed Intermediate-Risk (IR). The SR patients received decelerated therapy while HR group was treated under intensified therapy or bone marrow transplant. Results: Of 362 patients enrolled, Ma-Spore risk stratification is possible in 360 patients (n=2 delayed treatment), out of which 239 have completed 2 years therapy, 15 had induction failures, and 22 had relapses (isolated BM=17, isolated CNS=4, isolated testis=1.) Patients stratified into SR=29% (n=106/360); IR=50% (n=180/360), and HR=21% (n=74/360). At the end of the study, 4-years overall survival (0S) was SR=94.2±2.5%; IR=95.3±1.6%; HR=66.2±6.5%; event-free survival (EFS) was SR=91.8±3%; IR=86.2±3.4%; HR=52.9±6.4%, and leukemia-free survival (LFS) was SR=94.8±2.6%; IR=90.5±3.2%; HR=62.7±6.6%. Within the HR subgroup, using multivariate analysis, high MRD levels at week 12 ( & gt;10−3) is significantly associated with adverse treatment outcome (OS=27.5±15.8%, EFS=17.9±14.4%; LFS=23.1±17.8%), whilst poor prednisolone responders alone in the absence of high risk MRD or high risk BCR-AL or MLL-AF4 did well (OS=84.1±7.4%, EFS=84.1±7.4%, LFS= no event). Of the 362 patients, at least 91% (n=309/339) of patients had at least 1 sensitive MRD marker; the remaining patients have no diagnostic samples (n=9), died before time-point 1(n=10), and default before time-point 1(n=4). For risk-stratification using only MRD levels, 45.7% of the patients (n=128/280) were low-risk with MRD & lt;10−4 at both time-points; 3.2% of the patients (n=9) were high-risk with MRD & gt;10−3 at week 12; and the remaining 51.1% (n=143) were stratified as intermediate-risk MRD. Overall survival in MRD low-risk group was 93.2±2.5%, MRD intermediate-risk was 93.6±2.4% and MRD high-risk MRD was 45±18.8%. Conclusion: We have demonstrated that a simplified MRD methodology using a single PCR-based marker (IgH/TCR) can be successfully implemented to tailor therapy for childhood ALL without adversely affecting outcome. It is cost-effective and can be applied to a larger group of patients (91%). This is particularly useful for countries with limited resources to pursue risk stratification incorporating MRD. Deceleration of therapy in the SR group would also help to reduce long-term side effects and better quality life in these children.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2008
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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