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  • 1
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 73, No. 8_Supplement ( 2013-04-15), p. 4350-4350
    Abstract: Purpose: FR901464 (FR) is an antitumor agent that specifically binds to and inhibits the function of splicing factor 3B subunit 1 (SF3B1). Higher frequencies of SF3B1 gene mutations and their relevance to cancer progression have been shown in studies of hematological malignancies. We assessed the frequencies of SF3B1 gene mutations in colorectal cancer (CRC) and the correlation of SF3B1 mutations and FR sensitivity in CRC. Experimental Design: We measured FR sensitivity in CRC cell lines to establish FR-resistant clones and performed DNA sequencing of all 25 SF3B1 exons in nine CRC cell lines, FR-resistant clones, and 16 CRC patients. On the basis our results, we performed further DNA sequencing in 80 CRC patients. Results: The FR IC50 values in all CRC cell lines were & lt; 1ng/ml. Six FR-resistant clones were established: three from DLD1, two from HCT116, and one from LoVo cells. The FR IC50 of the FR-resistant clones was & gt; 500-fold greater than that of their parental cells, although the IC50 of oxaliplatin or 5-fuluorouracil were the same. We found nonsense mutations in exon 10 of DLD1 cells and no significant mutations in the other samples. All the FR-resistant clones had the missense mutations in codon 1073 of exon 22. We found no mutation in exons 10, 22, and 12-15, which were previously reported in hematological malignancies in 80 CRC patients. Conclusion: Our data indicated the usefulness of the SF3B1 inhibitor as a novel molecular targeted drug for CRC and the other malignancies without codon 1073 mutations. Citation Format: Tomoki Yamano, Hidenori Nakajima, Satoshi Tsuda, Shuji Kubo, Mie Hamanaka, Masayoshi Kobayashi, Daisuke Yamagishi, Takashi Kuno, Kiyoshi Tsukamoto, Astuko Tamamoto, Masafumi Noda, Nagahide Matsubara, Dave SB Hoon, Naohiro Tomita. Low frequencies of SF3B1 mutations indicate SF3B1 inhibitor as a novel moleculartargeted drug for colorectal cancer. [abstract]. In: Proceedings of the 104th Annual Meeting of the American Association for Cancer Research; 2013 Apr 6-10; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2013;73(8 Suppl):Abstract nr 4350. doi:10.1158/1538-7445.AM2013-4350
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
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    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2013
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  • 2
    In: Molecular Therapy - Oncolytics, Elsevier BV, Vol. 3 ( 2016), p. 16031-
    Type of Medium: Online Resource
    ISSN: 2372-7705
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2016
    detail.hit.zdb_id: 2842549-2
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  • 3
    Online Resource
    Online Resource
    Impact Journals, LLC ; 2019
    In:  Oncotarget Vol. 10, No. 3 ( 2019-01-08), p. 352-367
    In: Oncotarget, Impact Journals, LLC, Vol. 10, No. 3 ( 2019-01-08), p. 352-367
    Type of Medium: Online Resource
    ISSN: 1949-2553
    URL: Issue
    Language: English
    Publisher: Impact Journals, LLC
    Publication Date: 2019
    detail.hit.zdb_id: 2560162-3
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  • 4
    Online Resource
    Online Resource
    American Association for Cancer Research (AACR) ; 2015
    In:  Cancer Research Vol. 75, No. 15_Supplement ( 2015-08-01), p. 5453-5453
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 75, No. 15_Supplement ( 2015-08-01), p. 5453-5453
    Abstract: Purpose: The mechanism of Oxaliplatin (OHP) resistance is partly understood and no molecular marker for prediction of the sensitivity is available in clinic. We analyzed OHP resistant clones to establish the molecular marker for OHP sensitivity in colorectal cancer. Experimental design: We established several OHP-resistant clones from human colon cancer cell lines, DLD1 and HCT116. Then we assayed IC50 of OHP- resistant clones against OHP, 5-FU, and CPT-11. We measured gene expression profiling by microarray analysis and gene mutations by exome sequencing. Based on these results, we selected candidate genes associated with OHP sensitivity, which had gene mutations with significant change of gene expression. To validate the results, we assessed the gene expression of candidate genes in colorectal cancer patients. Results: All OHP-resistant clones derived from HCT116 were also resistant against 5-FU and CPT-11, although all OHP-resistant clones derived from DLD1 were still sensitive against 5-FU and CPT-11. Microarray analysis and exon sequencing indicated gene mutations in SMAD7 and IRF9 with amplified gene expression were candidate molecular markers for multidrug resistance in OHP-resistant clones derived from HCT116, although the gene expression in tumors of these genes were lower than normal mucosa in most of colorectal cancer patients. Conclusions: The mechanisms of OHP resistance were different between OHP-resistant clones derived from DLD1 and those from HCT116, but the same among the clones if the parental cells were same. SMAD7 and IRF9 were candidate molecular markers to predict multidrug resistance. Citation Format: Tomoki Yamano, Shuji Kubo, Aya Yano, Naohiro Tomita. Different mechanism of Oxaliplatin resistance in human colorectal cancer cell lines. [abstract]. In: Proceedings of the 106th Annual Meeting of the American Association for Cancer Research; 2015 Apr 18-22; Philadelphia, PA. Philadelphia (PA): AACR; Cancer Res 2015;75(15 Suppl):Abstract nr 5453. doi:10.1158/1538-7445.AM2015-5453
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
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    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2015
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  • 5
    In: PLOS ONE, Public Library of Science (PLoS), Vol. 16, No. 5 ( 2021-5-4), p. e0250072-
    Abstract: Circulating microRNAs (miRNAs) are considered promising biomarkers for diagnosis, prognosis, and treatment efficacy of diseases. However, usefulness of circulating miRNAs as biomarkers for hereditary gastrointestinal diseases have not been confirmed yet. We explored circulating miRNAs specific for patients with familial adenomatous polyposis (FAP) as a representative hereditary gastrointestinal disease. Next-generation sequencing (NGS) indicated that plasma miR-143-3p, miR-183-5p, and miR-885-5p were candidate biomarkers for five FAP patients compared to three healthy donors due to moderate copy number and significant difference. MiR-16-5p was considered as an internal control due to minimum difference in expression across FAP patients and healthy donors. Validation studies by real-time PCR showed that mean ratios of maximum expression and minimum expression were 2.2 for miR-143-3p/miR-16-5p, 3.4 for miR-143-3p/miR-103a-3p, 5.1 for miR-183-5p/miR-16-5p, and 4.9 for miR-885-5p/miR-16-5p by using the samples collected at different time points of eight FAP patients. MiR-143-3p/16-5p was further assessed using specimens from 16 FAP patients and 7 healthy donors. MiR-143-3p was upregulated in FAP patients compared to healthy donors ( P = 0.04), but not significantly influenced by clinicopathological features. However, miR-143-3p expression in colonic tumors was rare for upregulation, although there was a significant difference by existence of desmoid tumors. MiR-143-3p transfection significantly inhibited colorectal cancer cell proliferation compared to control microRNA transfection. Our data suggested regulation of miR-143-3p expression differed by samples (plasma or colonic tumors) in most FAP patients. Upregulation of plasma miR-143-3p expression may be helpful for diagnosis of FAP, although suppressive effect on tumorigenesis seemed insufficient in FAP patients.
    Type of Medium: Online Resource
    ISSN: 1932-6203
    Language: English
    Publisher: Public Library of Science (PLoS)
    Publication Date: 2021
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  • 6
    In: Cancer Science, Wiley, Vol. 104, No. 11 ( 2013-11), p. 1433-1439
    Abstract: Oncolytic virotherapy using adenoviruses has potential for therapeutic benefits in malignant mesothelioma. However, the downregulation of coxsackie virus/adenovirus receptor ( CAR ) expression is frequently a critical rate‐limiting factor that impedes the effectiveness of adenovirus serotype 5 (Ad5)‐based vectors in many cancer types. We evaluated CAR (Ad5 receptor) and CD 46 (adenovirus serotype 35 [Ad35] receptor) expression in six human malignant mesothelioma cell lines. Very low CAR expression was observed in MSTO ‐211H and NCI ‐H2052 cells, whereas the other cell lines showed strong expression. In contrast, CD 46 was highly expressed in all mesothelioma cell lines. On this basis, we replaced the CAR binding sequence of Ad5 with the CD 46 binding sequence of Ad35 in the replication‐defective adenoviruses and the tumor‐specific midkine promoter‐regulated oncolytic adenoviruses. By this fiber modification, the infectivity, virus progeny production, and in vitro cytocidal effects of the adenoviruses were significantly enhanced in low CAR ‐expressing MSTO ‐211H and NCI ‐H2052 cells, also resulting in similar or even higher levels in high CAR ‐expressing mesothelioma cell lines. In MSTO ‐211H xenograft models, the fiber‐modified oncolytic adenovirus significantly enhanced antitumor effect compared to its equivalent Ad5‐based vector. Our data demonstrate that Ad35 fiber modification of binding tropism in a midkine promoter‐regulated oncolytic Ad5 vector confers transductional targeting to oncolytic adenoviruses, thereby facilitating more effective treatment of malignant mesothelioma.
    Type of Medium: Online Resource
    ISSN: 1347-9032 , 1349-7006
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2013
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    detail.hit.zdb_id: 2111204-6
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  • 7
    Online Resource
    Online Resource
    American Association for Cancer Research (AACR) ; 2014
    In:  Cancer Research Vol. 74, No. 19_Supplement ( 2014-10-01), p. 4615-4615
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 74, No. 19_Supplement ( 2014-10-01), p. 4615-4615
    Abstract: Purpose: We have reported that SF3B1 gene mutations are rare in colorectal cancer patients and SF3B1 gene mutations in codon 1074 are responsible for resistance to SF3B1 inhibitor (FR901464, FR) at the AACR annual meeting 2013. SF3B1 gene mutations in hematological malignancies are considered to be related to tumor progression. To elucidate the influence by SF3B1 gene mutation in colorectal cancer, we assessed the tumor growth of colorectal cancer cells bearing SF3B1 gene mutation in vitro and in vivo. ExperimentalDesign: We assessed the tumor growth in vitro and in vivo using FR resistant clones (DLD/FR1, DLD/FR2, DLD/FR3, HCT/FR1, HCT/FR2, and LoVo/FR1) derived from DLD1, HCT116, and LoVo. We also performed microarray analysis of DLD1, DLD/FR1, HCT116, and HCT/FR1 with or without FR for 24 h to compare the change of gene expression by FR or SF3B1 gene mutation. Results: Doubling time of growth in DLD/FR1, DLD/FR2, HCT/FR1, and HCT/FR2 in vitro was same as their parental cells. However, doubling time of growth in DLD/FR3 and LoVo/FR1 in vitro was longer than their parental cells. In mouse subcutaneous xenograft models, the tumor volume of DLD1/FR1, HCT/FR1, and HCT/FR2 were 61%, 32 %, and 25%, to compared to that of their parental DLD1 or HCT116 one month after inoculation, respectively. Microarray analysis showed the genes and pathways affected by SF3B1 inhibitor and SF3B1 gene mutation did not match at all. Though SF3B1 inhibitor strongly inhibited pathways related to cell cycle, Fanconi anemia, homologous recombination, ubiquitin mediated proteolysis, nucleotide excision repair, oocyte meiosis, basal transcription factors, and endocytosis, SF3B1 gene mutation did not influence these pathways. The genes influenced by SF3B1 gene mutations included MHC class I/II, MHC MYC, BCL2, IL2, and IL10. Conclusion: Our data indicated SF3B1 gene mutation in colorectal cancer induced disadvantage in cancer progression by the different pathway from SF3B1 inhibitor. Citation Format: Tomoki Yamano, Shuji Kubo, Nagahide Matsubara, Aya Yano, Naohiro Tomita. Influence of SF3B1 gene mutation is different from that of Sf3B1 inhibitor in colorectal cancer. [abstract]. In: Proceedings of the 105th Annual Meeting of the American Association for Cancer Research; 2014 Apr 5-9; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2014;74(19 Suppl):Abstract nr 4615. doi:10.1158/1538-7445.AM2014-4615
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
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    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2014
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    detail.hit.zdb_id: 1432-1
    detail.hit.zdb_id: 410466-3
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  • 8
    Online Resource
    Online Resource
    Wiley ; 2020
    In:  Cancer Medicine Vol. 9, No. 10 ( 2020-05), p. 3337-3343
    In: Cancer Medicine, Wiley, Vol. 9, No. 10 ( 2020-05), p. 3337-3343
    Abstract: Basic and clinical studies on small bowel adenocarcinoma (SBA) are limited due to the rare nature of this cancer. We established a patient‐derived xenograft (PDX) model from the tumor tissue of an advanced SBA patient with liver and peritoneal metastasis, and a cell line from the PDX. In the PDX model, compared to the control group, 5‐fluorouracil (5‐FU) treatment resulted in statistically significant tumor growth inhibition (TGI), while oxaliplatin (OHP) and irinotecan had no significant inhibitory effects. In combination with 5‐FU, OHP showed the highest rate of TGI. The IC 50 for OHP was significantly lower than those for paclitaxel, gemcitabine, and trifluorothymidine in the PDX‐derived cell line when compared to in HT29, a colon cancer cell line. Genetic analysis of the patient tumor, PDX tumor, and the cell line demonstrated consistency in the microsatellite status and mutations in TP53 , APC , HRAS , CSF1R , FGFR3 , FLT3 , PDGFRA , and RET genes. However, the PDX tumor alone had additional mutations, indicating that the PDX‐derived cell line may support the unstable genetic status of the PDX. Our findings confirmed the effectiveness of the combination of OHP and 5‐FU, which is a common treatment for advanced SBA and advanced colorectal cancer, in a preclinical model. This preclinical model of SBA can help in further understanding the biology of SBA.
    Type of Medium: Online Resource
    ISSN: 2045-7634 , 2045-7634
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2020
    detail.hit.zdb_id: 2659751-2
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