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  • 1
    In: BMC Plant Biology, Springer Science and Business Media LLC, Vol. 22, No. 1 ( 2022-12-13)
    Abstract: Proline (Pro) and hydrogen peroxide (H 2 O 2 ) play a critical role in plants during drought adaptation. Genetic mapping for drought-induced Pro and H 2 O 2 production under field conditions is very limited in crop plants since their phenotyping with large populations is labor-intensive. A genome-wide association study (GWAS) of a diversity panel comprised of 184 bread wheat cultivars grown in natural field (control) and rain-out shelter (drought) environments was performed to identify candidate loci and genes regulating Pro and H 2 O 2 accumulation induced by drought. Results The GWAS identified top significant marker-trait associations (MTAs) on 1A and 2A chromosomes, respectively for Pro and H 2 O 2 in response to drought. Similarly, MTAs for stress tolerance index (STI) of Pro and H 2 O 2 were identified on 5B and 1B chromosomes, respectively. Total 143 significant MTAs were identified including 36 and 71 were linked to drought and 2 and 34 were linked to STI for Pro and H 2 O 2, respectively. Next, linkage disequilibrium analysis revealed minor alleles of significant single-markers and haplotypes were associated with higher Pro and H 2 O 2 accumulation under drought. Several putative candidate genes for Pro and H 2 O 2 content encode proteins with kinase, transporter or protein-binding activities. Conclusions The identified genetic factors associated with Pro and H 2 O 2 biosynthesis underlying drought adaptation lay a fundamental basis for functional studies and future marker-assisted breeding programs.
    Type of Medium: Online Resource
    ISSN: 1471-2229
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2022
    detail.hit.zdb_id: 2059868-3
    SSG: 12
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  • 2
    In: Plant Breeding, Wiley, Vol. 142, No. 4 ( 2023-08), p. 449-462
    Abstract: Proline is an important metabolite that plays an adaptive role in plants under water‐deficit stress. Understanding the genetic basis of water‐deficit‐induced proline accumulation remains elusive in crop plants, especially in wheat. Here, we investigated proline accumulation under control and water‐deficit conditions using a diversity panel which comprises of 150 bread wheat cultivars. Water‐deficit stress significantly increased proline accumulation than well‐water treated plants. Water‐deficit‐induced proline variability was dissected using genome‐wide association studies that identified significant marker‐trait associations, especially on 1A and 1B chromosomes. Population structure analysis revealed the cultivars originated from Europe were associated with higher proline content. Further, linkage disequilibrium analysis identified minor allele of haplotypes, and single markers were linked with higher proline accumulation under water‐deficit conditions. The identified candidate genes were mostly involved in ATP and ADP binding, protein and oligopeptide transporter activity and also found in defence response, carbohydrate and fatty acid biosynthetic processes. Next, an in silico transcript analysis found higher expression of candidate genes in shoot/leaves under water‐deficit stress conditions. Overall, the key genomic regions controlling water deficit‐induced proline accumulation can be utilized in improving plant adaptation to drought.
    Type of Medium: Online Resource
    ISSN: 0179-9541 , 1439-0523
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2023
    detail.hit.zdb_id: 2020488-7
    SSG: 12
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  • 3
    In: The Plant Genome, Wiley
    Abstract: Genetic analysis of multiple root traits in two consecutive years field trials revealed quantitative trait loci, which are simultaneously responsible for several traits of root architecture in spring barley. The multi‐trait affecting loci and putative candidate genes modulate root architecture under drought stress.
    Type of Medium: Online Resource
    ISSN: 1940-3372 , 1940-3372
    Language: English
    Publisher: Wiley
    Publication Date: 2024
    detail.hit.zdb_id: 2440458-5
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