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  • Huisman, Henkjan J.  (3)
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  • 1
    Online-Ressource
    Online-Ressource
    Wiley ; 2016
    In:  Medical Physics Vol. 43, No. 6Part1 ( 2016-06), p. 3132-3142
    In: Medical Physics, Wiley, Vol. 43, No. 6Part1 ( 2016-06), p. 3132-3142
    Kurzfassung: To investigate whether atlas‐based anatomical information can improve a fully automated lymph node detection system for pelvic MR lymphography (MRL) images of patients with prostate cancer. Methods: Their data set contained MRL images of 240 prostate cancer patients who had an MRL as part of their clinical work‐up between January 2008 and April 2010, with ferumoxtran‐10 as contrast agent. Each MRL consisted of at least a 3D T1‐weighted sequence, a 3D T2*‐weighted sequence, and a FLASH‐3D sequence. The reference standard was created by two expert readers, reading in consensus, who annotated and interactively segmented the lymph nodes in all MRL studies. A total of 5089 lymph nodes were annotated. A fully automated computer‐aided detection (CAD) system was developed to find lymph nodes in the MRL studies. The system incorporates voxel features based on image intensities, the Hessian matrix, and spatial position. After feature calculation, a GentleBoost‐classifier in combination with local maxima detection was used to identify lymph node candidates. Multiatlas based anatomical information was added to the CAD system to assess whether this could improve performance. Using histogram analysis and free‐receiver operating characteristic analysis, this was compared to a strategy where relative position features were used to encode anatomical information. Results: Adding atlas‐based anatomical information to the CAD system reduced false positive detections both visually and quantitatively. Median likelihood values of false positives decreased significantly in all annotated anatomical structures. The sensitivity increased from 53% to 70% at 10 false positives per lymph node. Conclusions: Adding anatomical information through atlas registration significantly improves an automated lymph node detection system for MRL images.
    Materialart: Online-Ressource
    ISSN: 0094-2405 , 2473-4209
    Sprache: Englisch
    Verlag: Wiley
    Publikationsdatum: 2016
    ZDB Id: 1466421-5
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 2
    Online-Ressource
    Online-Ressource
    PeerJ ; 2016
    In:  PeerJ Vol. 4 ( 2016-10-20), p. e2471-
    In: PeerJ, PeerJ, Vol. 4 ( 2016-10-20), p. e2471-
    Kurzfassung: The key to MR lymphography is suppression of T2* MR signal in normal lymph nodes, while retaining high signal in metastatic nodes. Our objective is to quantitatively compare the ability of ferumoxtran-10 and ferumoxytol to suppress the MR signal in normal pelvic lymph nodes. Methods In 2010, a set of consecutive patients who underwent intravenous MR Lymphography (MRL) were included. Signal suppression in normal lymph nodes in T2*-weighted images due to uptake of USPIO (Ultra-Small Superparamagnetic Particles of Iron Oxide) was quantified. Signal suppression by two USPIO contrast agents, ferumoxtran-10 and ferumoxytol was compared using Wilcoxon’s signed rank test. Results Forty-four patients were included, of which all 44 had a ferumoxtran-10 MRL and 4 had additionally a ferumoxytol MRL. A total of 684 lymph nodes were identified in the images, of which 174 had been diagnosed as metastatic. USPIO-induced signal suppression in normal lymph nodes was significantly stronger in ferumoxtran-10 MRL than in ferumoxytol MRL ( p   〈  0.005). Conclusions T2* signal suppression in normal pelvic lymph nodes is significantly stronger with ferumoxtran-10 than with ferumoxytol, which may affect diagnostic accuracy.
    Materialart: Online-Ressource
    ISSN: 2167-8359
    Sprache: Englisch
    Verlag: PeerJ
    Publikationsdatum: 2016
    ZDB Id: 2703241-3
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 3
    Online-Ressource
    Online-Ressource
    PeerJ ; 2019
    In:  PeerJ Vol. 7 ( 2019-11-22), p. e8052-
    In: PeerJ, PeerJ, Vol. 7 ( 2019-11-22), p. e8052-
    Kurzfassung: To investigate whether multi-view convolutional neural networks can improve a fully automated lymph node detection system for pelvic MR Lymphography (MRL) images of patients with prostate cancer. Methods A fully automated computer-aided detection (CAD) system had been previously developed to detect lymph nodes in MRL studies. The CAD system was extended with three types of 2D multi-view convolutional neural networks (CNN) aiming to reduce false positives (FP). A 2D multi-view CNN is an efficient approximation of a 3D CNN, and three types were evaluated: a 1-view, 3-view, and 9-view 2D CNN. The three deep learning CNN architectures were trained and configured on retrospective data of 240 prostate cancer patients that received MRL images as the standard of care between January 2008 and April 2010. The MRL used ferumoxtran-10 as a contrast agent and comprised at least two imaging sequences: a 3D T1-weighted and a 3D T2*-weighted sequence. A total of 5089 lymph nodes were annotated by two expert readers, reading in consensus. A first experiment compared the performance with and without CNNs and a second experiment compared the individual contribution of the 1-view, 3-view, or 9-view architecture to the performance. The performances were visually compared using free-receiver operating characteristic (FROC) analysis and statistically compared using partial area under the FROC curve analysis. Training and analysis were performed using bootstrapped FROC and 5-fold cross-validation. Results Adding multi-view CNNs significantly ( p   〈  0.01) reduced false positive detections. The 3-view and 9-view CNN outperformed ( p   〈  0.01) the 1-view CNN, reducing FP from 20.6 to 7.8/image at 80% sensitivity. Conclusion Multi-view convolutional neural networks significantly reduce false positives in a lymph node detection system for MRL images, and three orthogonal views are sufficient. At the achieved level of performance, CAD for MRL may help speed up finding lymph nodes and assessing them for potential metastatic involvement.
    Materialart: Online-Ressource
    ISSN: 2167-8359
    Sprache: Englisch
    Verlag: PeerJ
    Publikationsdatum: 2019
    ZDB Id: 2703241-3
    Standort Signatur Einschränkungen Verfügbarkeit
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