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  • 1
    In: Cytometry, Wiley, Vol. 47, No. 2 ( 2002-02), p. 89-99
    Abstract: Telomeres containing noncoding DNA repeats at the end of the chromosomes are essential for chromosomal stability and are implicated in regulating the replication and senescence of cells. The gradual loss of telomere repeats in cells has been linked to aging and tumor development and methods to measure telomere length are of increasing interest. At least three methods for measuring the length of telomere repeats have been described: Southern blot analysis and quantitative fluorescence in situ hybridization using either digital fluorescence microscopy (Q‐FISH) or flow cytometry (flow‐FISH). Both Southern blot analysis and Q‐FISH have specific limitations and are time‐consuming, whereas the flow‐FISH technique requires relatively few cells (10 5 ) and can be completed in a single day. A further advantage of the flow‐FISH method is that data on the telomere length from individual cells and subsets of cells (lymphocytes and granulocytes) can be acquired from the same sample. In order to obtain accurate and reproducible results using the flow‐FISH technique, we systematically explored the influence of various steps in the protocol on telomere length values and established an acceptable range for the most critical parameters. Methods Isolated leukocytes from whole blood are denatured by heat and 70%/75% formamide, then hybridized with or without a telomere‐specific fluorescein isothiocyante (FITC)‐conjugated peptide nucleic acid probe (PNA). Unbound telomere PNA is washed away, the DNA is counterstained, and telomere fluorescence is measured on a flow cytometer using an argon ion laser (488 nm) to excite FITC. For each sample, duplicates of telomere PNA‐stained and unstained tubes are analyzed. Results Cell counts and flow‐FISH telomere length measurements were performed on leukocytes and thymocytes of humans and other species. Leukocyte suspensions were prepared by two red blood cell lysis steps with ammonium chloride. Optimal denaturation of DNA was achieved by heating at 85–87°C for 15 min in a solution containing 70%/75% formamide. Hybridization was performed at room temperature with a 0.3 μg/ml telomere‐PNA probe for at least 60–90 min. Unbound telomere‐PNA probe was diluted at least 4,000–40,000 times with wash steps containing 70%/75% formamide at room temperature. LDS 751 and DAPI were suitable as DNA counterstains as they did not show significant interference with telomere length measurement. Conclusions The use of flow‐FISH for telomere length measurements in nucleated blood cells requires tight adherence to an optimized protocol. The method described here can be used to determine rapidly the telomere length in subsets of nucleated blood cells. Cytometry 47:89–99, 2002. © 2002 Wiley‐Liss, Inc.
    Type of Medium: Online Resource
    ISSN: 0196-4763 , 1097-0320
    URL: Issue
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    Language: English
    Publisher: Wiley
    Publication Date: 2002
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  • 2
    Online Resource
    Online Resource
    Wiley ; 2003
    In:  Cytometry Vol. 55A, No. 1 ( 2003-09), p. 1-6
    In: Cytometry, Wiley, Vol. 55A, No. 1 ( 2003-09), p. 1-6
    Type of Medium: Online Resource
    ISSN: 0196-4763 , 1097-0320
    URL: Issue
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    Language: English
    Publisher: Wiley
    Publication Date: 2003
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  • 3
    In: The Journal of Experimental Medicine, Rockefeller University Press, Vol. 200, No. 11 ( 2004-12-06), p. 1407-1417
    Abstract: Human immunodeficiency virus (HIV)-specific CD8+ T cells persist in high frequencies in HIV-infected patients despite impaired CD4+ T helper response to the virus, but, unlike other differentiated effector cytotoxic T lymphocytes, most continue to express the tumor necrosis factor receptor family member CD27. Because the ligand for CD27 (CD70) is also overexpressed in HIV-infected hosts, we examined the nature of expression and potential functional consequences of CD27 expression on HIV-specific CD8+ T cells. Analysis of CD27+ and CD27− T cells derived from the same HIV-specific clone revealed that retention of CD27 did not interfere with acquisition of effector functions, and that after T cell receptor stimulation, CD27+ cells that concurrently were triggered via CD27 exhibited more resistance to apoptosis, interleukin 2 production, and proliferation than CD27− T cells. After transfer back into an HIV-infected patient, autologous HIV-specific CD27− T cells rapidly disappeared, but CD27+ T cells derived from the same clone persisted at high frequency. Our findings suggest that the CD27–CD70 interaction in HIV infection may provide CD27+ CD8+ T cells with a survival advantage and compensate for limiting or absent CD4+ T help to maintain the CD8 response.
    Type of Medium: Online Resource
    ISSN: 1540-9538 , 0022-1007
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    Language: English
    Publisher: Rockefeller University Press
    Publication Date: 2004
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  • 4
    In: Blood, American Society of Hematology, Vol. 104, No. 11 ( 2004-11-16), p. 2832-2832
    Abstract: Human telomerase uses a portion of its integral RNA component (hTER) as the template to synthesize telomeres at chromosome ends. hTER sequence polymorphisms have been observed in some patients with bone marrow failure syndromes such as aplastic anemia, but the functional significance of most such variants is unknown. Here, we report the functional characteristics of ten previously-described and two newly discovered hTER disease-associated polymorphisms. Most of these hTER variants adversely affected telomerase enzymatic function as measured in the telomerase reconstituted human cells. Similar loss-of-function effects were also seen directly in primary lymphocytes collected from two of the patients. The majority of the functional deficits stemmed from perturbations of the predicted hTER RNA secondary structure, and corresponded well with the degrees of telomere shortening observed in patients. In contrast, hTER variants anticipated to be inconsequential polymorphisms, which were also found in healthy subjects, did not interfere with telomerase function. Loss of telomerase activity and of telomere maintenance resulting from inherited hTER mutations may predispose some patients to aplastic anemia and other marrow failure disorders.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2004
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  • 5
    In: Blood, American Society of Hematology, Vol. 102, No. 3 ( 2003-08-01), p. 916-918
    Abstract: Mutations in the human telomerase RNA (TERC) occur in autosomal dominant dyskeratosis congenita (DKC). Because of the possibility that TERC mutations might underlie seemingly acquired forms of bone marrow failure, we examined blood samples from a large number of patients with aplastic anemia (AA), paroxysmal nocturnal hemoglobinuria (PNH), and myelodysplasia (MDS). Only 3 of 210 cases showed heterozygous TERC mutations: both nucleotide 305 (n305) (G & gt;A) and n322 (G & gt;A) were within the conserved region (CR) 4–CR5 domain; n450 (G & gt;A) was localized to the boxH/ACA domain. However, only one patient (with a mutation at n305 [G & gt;A]) had clinical characteristics suggesting DKC; her blood cells contained short telomeres and her sister also suffered from bone marrow failure. Another 21 patients with short telomeres did not show TERC mutations. Our results suggest that cryptic DKC, at least secondary to mutations in the TERC gene, is an improbable diagnosis in patients with otherwise typical AA, PNH, and MDS.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2003
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  • 6
    In: Science, American Association for the Advancement of Science (AAAS), Vol. 288, No. 5466 ( 2000-04-28), p. 665-669
    Abstract: The potential of cloning depends in part on whether the procedure can reverse cellular aging and restore somatic cells to a phenotypically youthful state. Here, we report the birth of six healthy cloned calves derived from populations of senescent donor somatic cells. Nuclear transfer extended the replicative life-span of senescent cells (zero to four population doublings remaining) to greater than 90 population doublings. Early population doubling level complementary DNA-1 (EPC-1, an age-dependent gene) expression in cells from the cloned animals was 3.5- to 5-fold higher than that in cells from age-matched (5 to 10 months old) controls. Southern blot and flow cytometric analyses indicated that the telomeres were also extended beyond those of newborn ( 〈 2 weeks old) and age-matched control animals. The ability to regenerate animals and cells may have important implications for medicine and the study of mammalian aging.
    Type of Medium: Online Resource
    ISSN: 0036-8075 , 1095-9203
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    Language: English
    Publisher: American Association for the Advancement of Science (AAAS)
    Publication Date: 2000
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  • 7
    In: Blood, American Society of Hematology, Vol. 104, No. 11 ( 2004-11-16), p. 3-3
    Abstract: About one third of patients with acquired aplastic anemia (AA) have very short telomeres of their peripheral blood leukocytes; short telomeres correlate to long disease duration and poor response to immunosuppressive therapy. We have recently shown that some cases of apparently “acquired” AA have mutations in TERC, the gene encoding the RNA component of telomerase (Fogarty et al., Lancet2003;632:1628; Yamaguchi et al., Blood2003;102:916). In the current study, we examined TERT, the gene encoding the telomerase reverse transcriptase, by sequencing the gene’s exons and proximal promoter region in peripheral blood DNA samples from 122 patients with AA and 282 controls. Four novel nonsynonymous mutations among five patients, not present in controls, were discovered; three polymorphisms were identified, two nonsynonymous SNPs and one deletion of a single amino acid. To investigate the functional consequences of the mutations, telomere lengths of leukocytes were assessed by flow cytometric fluorescence in situ hybridization (flow-FISH). All patients carrying TERT mutations had markedly short telomeres compared to age-matched controls, as opposed to other AA patients with polymorphisms, whose telomeres were normal. In one patient’s kindred, presence of the TERT mutation in other family members correlated to telomere shortening; non-carriers had normal telomeres. Telomerase function in patients’ T cells, activated by phytohemagglutinin and interleukin-2 to increase enzymatic activity, was measured by the telomeric repeat amplification protocol (TRAP). In all mutant AA patients evaluated, cell lysates yielded very low or no telomerase activity, as compared to normal controls. We cloned the AA-related mutations into a TERT expression vector and co-transfected these vectors into VA13 cells (with a TERC-containing vector, as this cell line does not have telomerase activity due to absent TERC and TERT expression). All mutant TERT-containing cell lysates were severely deficient in enzymatic activity. TERT gene expression, as evaluated by Northern blot, was normal in cells transfected with the mutated genes. When vectors containing wild-type TERT and individual TERT mutations were cotransfected, telomerase activity was dramatically reduced, in comparison to transfection of wild-type TERT vector only. These results indicate a dominant negative mechanism of action of TERT mutations as responsible for the absence of telomerase activity in AA patients’ cells. Family members lacking telomerase activity have short telomeres but appear physically normal and have no hematological abnormalities. In a provisional model of the telomere repair complex and marrow failure, mutations in DKC1 and the stability regions of TERC cause dyskeratosis congenita, with early presentation and associated physical anomalies. Mutations that affect the enzyme-binding region of TERC and in TERT, the reverse transcriptase itself, lead to a constitutionally reduced stem cell compartment and appear to be genetic risk factors for the development of “acquired” aplastic anemia.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2004
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  • 8
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 2003
    In:  STEM CELLS Vol. 21, No. 6 ( 2003-11), p. 654-660
    In: STEM CELLS, Oxford University Press (OUP), Vol. 21, No. 6 ( 2003-11), p. 654-660
    Type of Medium: Online Resource
    ISSN: 1066-5099 , 1549-4918
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2003
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