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  • 1
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    Aliicoccus persicus gen. nov., sp. nov., a halophilic member of the Firmicutes isolated from a hypersaline lake
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_6 ( 2014-06-01), p. 1964-1969
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_6 ( 2014-06-01), p. 1964-1969
    Abstract: A novel Gram-staining-positive, moderately halophilic bacterium, designated strain A76 T , was isolated from a brine sample of the hypersaline lake Aran-Bidgol in Iran. Cells were strictly aerobic, coccus-shaped, non-motile, non-sporulating, and catalase- and oxidase-positive. Strain A76 T grew between pH 7.0 and 10.0 (optimal growth at pH 8.0), between 20 and 45 °C (optimal growth at 35 °C) and at salinities of 0.5 to 12.5 % (w/v) NaCl (optimal growth at 7.5 %, w/v, NaCl). On the basis of 16S rRNA gene sequence analysis, strain A76 T was shown to belong to the phylum Firmicutes with sequence similarities of 94.1, 93.1 and 91.1 %, to the type species of the genera Jeotgalicoccus , Salinicoccus and Nosocomiicoccus , respectively. The DNA G+C content of this new isolate was 38.8 mol%. The major cellular fatty acids of strain A76 T were anteiso-C 15 : 0 and iso-C 15 : 0 , and its polar lipid pattern consisted of diphosphatidylglycerol, phosphatidylglycerol, a glycolipid, an unknown lipid and two unknown phospholipids. The isoprenoid quinones were MK-6 (94 %), MK-5 (3 %) and MK-7 (3 %). The amino acid constituents of the cell wall were Lys, Asp, Gly, Glu and Ala. The physiological, biochemical and phylogenetic differences between strain A76 T and type strains of taxa with validly published names suggest that this strain represents a novel species in a novel genus within the family Staphylococcaceae , for which the name Aliicoccus persicus gen. nov., sp. nov. is proposed. The type strain of Aliicoccus persicus is strain A76 T ( = CECT 8508 T  = DSM 28306 T  = IBRC-M 10081 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.058545-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
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  • 2
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    Salinithrix halophila gen. nov., sp. nov., a halophilic bacterium in the family Thermoactinomycetaceae
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_12 ( 2014-12-01), p. 4115-4119
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_12 ( 2014-12-01), p. 4115-4119
    Abstract: A halophilic actinomycete, strain R4S8 T , was isolated from soil of Inche-Broun hypersaline wetland in the north of Iran. The isolate grew aerobically at temperatures of 30–50 °C (optimum 40 °C), pH 6–10 (optimum pH 7.0) and in the presence of 1–15 % (w/v) NaCl (optimum 3–5 %). It formed short and straight to moderately flexuous aerial mycelium without motile elements. The cell wall of strain R4S8 T contained meso -diaminopimelic acid as the diamino acid without any diagnostic sugars. The polar lipid pattern consisted of phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine, phosphatidylmonomethylethanolamine two unknown phospholipids and one unknown aminophospholipid. It synthesized anteiso-C 15 : 0 (44.8 %), iso-C 15 : 0 (28.8 %) and iso-C 14 : 0 (8.5 %) as major fatty acids. MK-6 was the predominant respiratory quinone. The G+C content of the genomic DNA was 52.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain R4S8 T belongs to the family Thermoactinomycetaceae and showed the closest 16S rRNA gene sequence similarity with Desmospora activa IMMIB L-1269 T (95.5 %) and Marininema mesophilum SCSIO 10219 T (95.3 %). On the basis of phylogenetic analysis and phenotypic characteristics, strain R4S8 T represents a novel species in a new genus within the family Thermoactinomycetaceae , for which the name Salinithrix halophila gen. nov., sp. nov. is proposed. The type strain of the type species is R4S8 T ( = IBRC-M 10813 T  = CECT 8506 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.064766-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 3
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    Nocardia halotolerans sp. nov., a halotolerant actinomycete isolated from saline soil
    Microbiology Society ; 2015
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 65, No. Pt_9 ( 2015-09-01), p. 3148-3154
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 65, No. Pt_9 ( 2015-09-01), p. 3148-3154
    Abstract: A novel halotolerant actinomycete, strain Chem15 T , was isolated from soil around Inche-Broun hypersaline wetland; its taxonomic position was determined based on a polyphasic approach. Strain Chem15 T was strictly aerobic and tolerated NaCl up to 12.5 %. The optimum temperature and pH for growth were 28–30 °C and pH 7.0–7.5, respectively. The cell wall of strain Chem15 T contained meso -diaminopimelic acid as diamino acid and galactose, arabinose and ribose as whole-cell sugars. The major phospholipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and phosphatidylinositol mannosides. The cellular fatty acids profile consisted of C 16 : 0 , iso-C 18 : 0 , C 18 : 0 10-methyl and C 18 : 1 ω9 c , and the major respiratory quinone was MK-8(H 4cycl ). The G+C content of the genomic DNA was 68.0 mol%. The novel strain constituted a distinct phyletic line within the genus Nocardia , based on 16S rRNA gene sequence analysis, and was closely associated with Nocardia sungurluensis DSM 45714 T and Nocardia alba DSM 44684 T (98.2 and 98.1 % 16S rRNA gene sequence similarity, respectively). However DNA–DNA relatedness and phenotypic data demonstrated that strain Chem15 T was clearly different from closely related species of the genus Nocardia . It is concluded that the organism should be classified as a representative of a novel species of the genus Nocardia , for which the name Nocardia halotolerans sp. nov. is proposed. The type strain is Chem15 T ( = IBRC-M 10490 T  = LMG 28544 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000394
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2015
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
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  • 4
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    Salininema proteolyticum gen. nov., sp. nov., a halophilic rare actinomycete isolated from wetland soil, and emended description of the family Glycomycetaceae
    Microbiology Society ; 2015
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 65, No. Pt_10 ( 2015-10-01), p. 3727-3733
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 65, No. Pt_10 ( 2015-10-01), p. 3727-3733
    Abstract: A Gram-stain-positive actinobacterial strain, Miq-4 T , was isolated from soil around Meighan wetland in the centre of Iran. Strain Miq-4 T was strictly aerobic, catalase- and oxidase-positive. The isolate grew in the presence of 3–15 % (w/v) NaCl, at 20–40 °C and pH 6.0–11.0. The optimum NaCl, temperature and pH for growth were 7.0 %, 30 °C and 7.0–8.5, respectively. The cell wall of strain Miq-4 T contained meso -diaminopimelic acid as the diamino acid and glucose and ribose as the whole-cell sugars. The polar lipid pattern consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and phosphatidylinositol mannoside. Strain Miq-4 T synthesized cellular fatty acids of anteiso- and iso-branched types, including anteiso-C 17 : 0 , anteiso- C 15 : 0 and iso-C 16 : 0 , and the major respiratory quinone was MK-9(H 4 ). The G+C content of the genomic DNA was 68.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences and characteristic patterns of 16S rRNA gene signature nucleotides revealed that strain Miq-4 T belongs to the family Glycomycetaceae and showed the closest phylogenetic similarity with Haloglycomyces albus YIM 92370 T (94.1 % 16S rRNA gene sequence similarity). On the basis of phylogenetic analysis and phenotypic and chemotaxonomic characteristics, strain Miq-4 T represents a novel species of a new genus in the family Glycomycetaceae, for which the name Salininema proteoliyticum gen. nov., sp. nov. is proposed. The type strain of the type species is Miq-4 T ( = IBRC-M 10908 T  = LMG 28391 T ). An emended description of the family Glycomycetaceae is also proposed in order to include features of the new genus.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000483
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2015
    detail.hit.zdb_id: 215062-1
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  • 5
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    Aliidiomarina iranensis sp. nov., a haloalkaliphilic bacterium from a coastal-marine wetland
    Microbiology Society ; 2016
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 66, No. 5 ( 2016-05-01), p. 2099-2105
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 66, No. 5 ( 2016-05-01), p. 2099-2105
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000996
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2016
    detail.hit.zdb_id: 215062-1
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  • 6
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    Salinifilum gen. nov., with description of Salinifilum proteinilyticum sp. nov., an extremely halophilic actinomycete isolated from Meighan wetland, Iran, and reclassification of Saccharopolyspora aidingensis as Salinifilum aidingensis comb. nov. and Saccharopolyspora ghardaiensis as Salinifilum ghardaiensis comb. nov
    Microbiology Society ; 2017
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 67, No. 10 ( 2017-10-01), p. 4221-4227
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 67, No. 10 ( 2017-10-01), p. 4221-4227
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.002286
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2017
    detail.hit.zdb_id: 215062-1
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  • 7
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    Ornithinibacillus halophilus sp. nov., a moderately halophilic, Gram-stain-positive, endospore-forming bacterium from a hypersaline lake
    Microbiology Society ; 2013
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 63, No. Pt_3 ( 2013-03-01), p. 844-848
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 63, No. Pt_3 ( 2013-03-01), p. 844-848
    Abstract: A novel Gram-stain-positive, moderately halophilic bacterium, designated strain G8B T , was isolated from water of the hypersaline lake Aran-Bidgol in Iran and characterized taxonomically using a polyphasic approach. Cells of strain G8B T were rod-shaped, motile and produced oval endospores at a terminal position in swollen sporangia. Strain G8B T was strictly aerobic, catalase-positive and oxidase-negative. The strain was able to grow at NaCl concentrations of 0.5–12.5 % (w/v), with optimum growth occurring at 5–7.5 % (w/v) NaCl. The optimum temperature and pH for growth were 35–40 °C and pH 7.5–8.0, respectively. On the basis of 16S rRNA gene sequence analysis, strain G8B T was shown to belong to the genus Ornithinibacillus within the phylum Firmicutes and showed closest phylogenetic similarity with Ornithinibacillus bavariensis WSBC 24001 T (97.6 %). The DNA G+C content of strain G8B T was 36.9 mol%. The major cellular fatty acids of strain G8B T were anteiso-C 15 : 0 , anteiso-C 17 : 0 , iso-C 15 : 0 and iso-C 16 : 0 , and its polar lipid pattern consisted of phosphatidylglycerol, diphosphatidylglycerol, four unknown phospholipids and an unknown aminolipid. The isoprenoid quinones were MK-7 (98 %) and MK-8 (2 %). Strain G8B T contained a peptidoglycan of type A4β, l -Orn– d -Asp. All these features confirmed the placement of isolate G8B T within the genus Ornithinibacillus . DNA–DNA hybridization experiments revealed a low level of relatedness (6 %) between strain G8B T and Ornithinibacillus bavariensis DSM 15681 T . On the basis of evidence from this study, a novel species of the genus Ornithinibacillus , Ornithinibacillus halophilus sp. nov., is proposed, with strain G8B T ( = IBRC-M 10683 T  = KCTC 13822 T ) as the type strain.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.041350-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2013
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
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  • 8
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    Cyclobacterium halophilum sp. nov., a marine bacterium isolated from a coastal-marine wetland
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_3 ( 2014-03-01), p. 1000-1005
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_3 ( 2014-03-01), p. 1000-1005
    Abstract: A novel Gram-stain-negative, slightly halophilic bacterium, designated strain GASx41 T , was isolated from soil of the coastal–marine wetland Gomishan in Iran. Cells of strain GASx41 T were curved, ring-like or horseshoe-shaped rods and non-motile. Strain GASx41 T was strictly aerobic, and catalase- and oxidase-positive. The strain was able to grow at NaCl concentrations of 1–10 % (w/v), with optimum growth occurring at 2.5–3 % (w/v) NaCl. The optimum temperature and pH for growth were 25–30 °C and pH 7.5–8.0. On the basis of 16S rRNA gene sequence analysis, strain GASx41 T was shown to belong to the genus Cyclobacterium within the phylum Bacteroidetes and showed closest phylogenetic similarity to ‘ Cyclobacterium jeungdonense ’ HMD3055 (98.0 %). The DNA G+C content of strain GASx41 T was 48.1 mol%. The major cellular fatty acids of strain GASx41 T were iso-C 15 : 0 , summed feature 4 (iso-C 15 : 0 2-OH and/or C 16 : 1 ω7 c ), anteiso-C 15 : 0 2-OH, anteiso-C 15 : 0 and iso-C 17 : 0 3-OH, and its polar lipid pattern consisted of phosphatidylethanolamine, phosphatidylcholine and 12 unknown lipids. The only quinone present was menaquinone 7 (MK-7). All these features confirmed the placement of isolate GASx41 T within the genus Cyclobacterium . On the basis of evidence from this study, a novel species of the genus Cyclobacterium , Cyclobacterium halophilum sp. nov., is proposed, with strain GASx41 T ( = IBRC-M 10761 T  = CECT 8341 T ) as the type strain.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.058743-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
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  • 9
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    Alloactinosynnema iranicum sp. nov., a rare actinomycete isolated from a hypersaline wetland, and emended description of the genus Alloactinosynnema
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_4 ( 2014-04-01), p. 1173-1179
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_4 ( 2014-04-01), p. 1173-1179
    Abstract: A Gram-staining-positive actinobacterial strain, Chem10 T , was isolated from soil around Inche-Broun hypersaline wetland in the north of Iran. Strain Chem10 T was strictly aerobic, and catalase- and oxidase-positive. The isolate grew with 0–3 % NaCl, at 20–40 °C and at pH 6.0–8.0. The optimum temperature and pH for growth were 30 °C and pH 7.0, respectively. The cell wall of strain Chem10 T contained meso -diaminopimelic acid as diamino acid and galactose, ribose and arabinose as whole-cell sugars. The polar lipid pattern contained diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. Strain Chem10 T synthesized cellular fatty acids of the straight-chain saturated and mono-unsaturated, and iso- and anteiso-branched types C 14 : 0 , C 16 : 0 , iso-C 16 : 1 , anteiso-C 17 : 0 , iso-C 16 : 0 , iso-C 14 : 0 and iso-C 15 : 0 , and the major respiratory quinone was MK-9(H 4 ). The G+C content of the genomic DNA was 70.7 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain Chem10 T belonged to the family Pseudonocardiaceae and showed the closest phylogenetic similarity to Alloactinosynnema album KCTC 19294 T (98.3 %) and Actinokineospora cibodasensis DSM 45658 T (97.9 %). DNA–DNA relatedness values between the novel strain and strains Alloactinosynnema album KCTC 19294 T and Actinokineospora cibodasensis DSM 45658 T were only 52 % and 23 %, respectively. On the basis of phylogenetic analysis, phenotypic characteristics and DNA–DNA hybridization data, a novel species of the genus Alloactinosynnema is proposed, Alloactinosynnema iranicum sp. nov. The type strain is Chem10 T ( = IBRC-M 10403 T  = CECT 8209 T ). In addition, an emended description of the genus Alloactinosynnema is proposed.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.049189-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 10
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    Erratum to: Marinobacter persicus sp. nov., a moderately halophilic bacterium from a saline lake in Iran
    Springer Science and Business Media LLC ; 2013
    In:  Antonie van Leeuwenhoek Vol. 104, No. 5 ( 2013-11), p. 897-897
    Details
    In: Antonie van Leeuwenhoek, Springer Science and Business Media LLC, Vol. 104, No. 5 ( 2013-11), p. 897-897
    Type of Medium: Online Resource
    ISSN: 0003-6072 , 1572-9699
    URL: Article
    DOI: 10.1007/s10482-013-0044-9
    RVK:
    WA 15000
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2013
    detail.hit.zdb_id: 1478112-8
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