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  • MDPI AG  (5)
  • Zhu, Jing  (5)
  • English  (5)
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  • MDPI AG  (5)
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  • English  (5)
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  • 1
    Online Resource
    Online Resource
    MDPI AG ; 2023
    In:  Atmosphere Vol. 14, No. 5 ( 2023-05-19), p. 888-
    In: Atmosphere, MDPI AG, Vol. 14, No. 5 ( 2023-05-19), p. 888-
    Abstract: Based on historical tropical cyclone (TC) tracking data and wind data from observation stations, four comparison experiments were designed that considered TC translation speed similarity and five new ensemble schemes in an improved Dynamical-Statistical-Analog Ensemble Forecast (DSAEF) model for Landfalling Typhoon Gale (LTG), which was tested in terms of forecast capability in South China. The results showed that the improved DSAEF_LTG model with the incorporation of TC translation speed and a new ensemble scheme could improve the forecast threat score (TS) and reduce both the false alarm ratio and the missing ratio in comparison with corresponding values attained before the improvement. The TS of the new ensemble scheme model (DLTG_3) was 0.34 at threshold above Beaufort Scale 7, which was 31% better than that of the unimproved model (DLTG_1). At a threshold above Beaufort Scale 10, the TS of DLTG_3 indicated even greater improvement, reaching 0.25, i.e., 127% higher than that of DLTG_1. The results of the experiments illustrated the marked improvement achievable when using the new ensemble scheme. The reasons for the differences in the DSAEF_LTG model forecasts before and after the introduction of TC translation speed and the new ensemble scheme were analyzed for the cases of Typhoon Haima and Typhoon Hato.
    Type of Medium: Online Resource
    ISSN: 2073-4433
    Language: English
    Publisher: MDPI AG
    Publication Date: 2023
    detail.hit.zdb_id: 2605928-9
    SSG: 23
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  • 2
    In: Foods, MDPI AG, Vol. 11, No. 14 ( 2022-07-21), p. 2163-
    Abstract: Lysine content is considered an important indicator of the quality of Flammulina filiformis. In this study, chitosan was used to improve lysine content of F. filiformis. Optimal design conditions were obtained using central combination design (CCD): treatment concentration was 14.61 μg/mL, treatment time was 52.90 h, and the theoretical value of lysine content was 30.95 mg/g. We used Basic Local Alignment Search Tool Protein (BLASTP) to search the F. filiformis genome database using known AATs in the NCBI database. There were 11 members of AAT in F. filiformis. The expression levels of AAT3 and AAT4 genes increased significantly with chitosan treatment. Subsequently, AAT3 and AAT4 silencing strains were constructed using RNAi technology. The lysine content of the wild-type (WT) strain treated with chitosan increased by 26.41%. Compared with the chitosan-induced WT strain, chitosan-induced lysine content decreased by approximately 24.87% in the AAT3 silencing strain, and chitosan-induced lysine content in the AAT4 silencing strain increased by approximately 13.55%. The results indicate that AAT3 and AAT4 are involved in the regulation of the biosynthesis of lysine induced by chitosan in F. filiformis. AAT3 may participate in the absorption of lysine, and AAT4 may be involved in the excretion of lysine with chitosan treatment.
    Type of Medium: Online Resource
    ISSN: 2304-8158
    Language: English
    Publisher: MDPI AG
    Publication Date: 2022
    detail.hit.zdb_id: 2704223-6
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  • 3
    In: Journal of Fungi, MDPI AG, Vol. 8, No. 7 ( 2022-06-30), p. 693-
    Abstract: Flammulina filiformis, previously known as Asian Flammulina velutipes, is one of the most commercially important edible fungi, with nutritional value and medicinal properties worldwide. However, precision genome editing using CRISPR/Cas9, which is a revolutionary technology and provides a powerful tool for molecular breeding, has not been established in F. filiformis. Here, plasmids harboring expression cassettes of Basidiomycete codon-optimized Cas9 and dual sgRNAs targeting pyrG under the control of the gpd promoter and FfU6 promoter, respectively, were delivered into protoplasts of F. filiformis Dan3 strain through PEG-mediated transformation. The results showed that an efficient native U6 promoter of F. filiformis was identified, and ultimately several pyrG mutants exhibiting 5-fluorooric acid (5-FOA) resistance were obtained. Additionally, diagnostic PCR followed by Sanger sequencing revealed that fragment deletion between the two sgRNA target sites or small insertions and deletions (indels) were introduced in these pyrG mutants through the nonhomologous end joining (NHEJ) pathway, resulting in heritable changes in genomic information. Taken together, this is the first report in which a successful CRISPR/Cas9 genome-editing system based on dual sgRNAs was established in F. filiformis, which broadens the application of this advanced tool in Basidiomycetes.
    Type of Medium: Online Resource
    ISSN: 2309-608X
    Language: English
    Publisher: MDPI AG
    Publication Date: 2022
    detail.hit.zdb_id: 2784229-0
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  • 4
    In: Energies, MDPI AG, Vol. 10, No. 10 ( 2017-09-23), p. 1473-
    Type of Medium: Online Resource
    ISSN: 1996-1073
    Language: English
    Publisher: MDPI AG
    Publication Date: 2017
    detail.hit.zdb_id: 2437446-5
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  • 5
    In: International Journal of Molecular Sciences, MDPI AG, Vol. 23, No. 21 ( 2022-10-29), p. 13147-
    Abstract: Carbon monoxide (CO), a product of organic oxidation processes, arises in vivo principally from the enzymatic reaction of heme oxygenase (HO, transcription gene named HMX1). HO/CO has been found to exert many salutary effects in multiple biological processes, including the stress response. However, whether HO/CO is involved in the regulation of the heat-stress (HS) response of Ganoderma lucidum (G. lucidum) is still poorly understood. In this paper, we reported that under heat stress, the HMX1 transcription level, HO enzyme activity, and CO content increased by 5.2-fold, 6.5-fold and 2-fold, respectively. HMX1 silenced strains showed a 12% increase in ganoderic acid (GA) content under HS as analyzed by HPLC. Furthermore, according to Western blot analysis of the protein phosphorylation levels, HMX1 attenuated the increase in phosphorylation levels of slt2, but the phosphorylation levels were prolonged over a 3 h HS time period. The chitin and glucan content in HMX1 silenced strains increased by 108% and 75%, respectively. In summary, these findings showed that the HO/CO system responds to heat stress and then regulates the HS-induced GA biosynthesis and the cell-wall integrity mediated by the Slt-MAPK phosphorylation level in G. lucidum.
    Type of Medium: Online Resource
    ISSN: 1422-0067
    Language: English
    Publisher: MDPI AG
    Publication Date: 2022
    detail.hit.zdb_id: 2019364-6
    SSG: 12
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