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  • 1
    Online Resource
    Online Resource
    Wiley ; 2017
    In:  Biological Reviews Vol. 92, No. 4 ( 2017-11), p. 2112-2130
    In: Biological Reviews, Wiley, Vol. 92, No. 4 ( 2017-11), p. 2112-2130
    Abstract: The largest marine biodiversity hotspot straddles the I ndian and P acific O ceans, driven by taxa associated with tropical coral reefs. Centred on the I ndo‐ A ustralian A rchipelago ( IAA ), this biodiversity hotspot forms the ‘bullseye’ of a steep gradient in species richness from this centre to the periphery of the vast I ndo‐ P acific region. Complex patterns of endemism, wide‐ranging species and assemblage differences have obscured our understanding of the genesis of this biodiversity pattern and its maintenance across two‐thirds of the world's oceans. But time‐calibrated molecular phylogenies coupled with ancestral biogeographic estimates have provided a valuable framework in which to examine the origins of coral reef fish biodiversity across the tropics. Herein, we examine phylogenetic and biogeographic data for coral reef fishes to highlight temporal patterns of marine endemism and tropical provinciality. The ages and distribution of endemic lineages have often been used to identify areas of species creation and demise in the marine tropics and discriminate among multiple hypotheses regarding the origins of biodiversity in the IAA . Despite a general under‐sampling of endemic fishes in phylogenetic studies, the majority of locations today contain a mixture of potential paleo‐ and neo‐endemic fishes, pointing to multiple historical processes involved in the origin and maintenance of the IAA biodiversity hotspot. Increased precision and sampling of geographic ranges for reef fishes has permitted the division of discrete realms, regions and provinces across the tropics. Yet, such metrics are only beginning to integrate phylogenetic relatedness and ancestral biogeography. Here, we integrate phylogenetic diversity with ancestral biogeographic estimation of lineages to show how assemblage structure and tropical provinciality has changed through time.
    Type of Medium: Online Resource
    ISSN: 1464-7931 , 1469-185X
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2017
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  • 2
    In: Nature Communications, Springer Science and Business Media LLC, Vol. 7, No. 1 ( 2016-05-06)
    Abstract: The Cretaceous breakup of Gondwana strongly modified the global distribution of shallow tropical seas reshaping the geographic configuration of marine basins. However, the links between tropical reef availability, plate tectonic processes and marine biodiversity distribution patterns are still unknown. Here, we show that a spatial diversification model constrained by absolute plate motions for the past 140 million years predicts the emergence and movement of diversity hotspots on tropical reefs. The spatial dynamics of tropical reefs explains marine fauna diversification in the Tethyan Ocean during the Cretaceous and early Cenozoic, and identifies an eastward movement of ancestral marine lineages towards the Indo-Australian Archipelago in the Miocene. A mechanistic model based only on habitat-driven diversification and dispersal yields realistic predictions of current biodiversity patterns for both corals and fishes. As in terrestrial systems, we demonstrate that plate tectonics played a major role in driving tropical marine shallow reef biodiversity dynamics.
    Type of Medium: Online Resource
    ISSN: 2041-1723
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2016
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  • 3
    Online Resource
    Online Resource
    Wiley ; 2017
    In:  Global Ecology and Biogeography Vol. 26, No. 2 ( 2017-02), p. 142-153
    In: Global Ecology and Biogeography, Wiley, Vol. 26, No. 2 ( 2017-02), p. 142-153
    Abstract: Typically, non‐indigenous species have been studied in relation to either the invaded (recipient) community or the donor community. However, we still lack a broad understanding of the mechanisms underlying the establishment of non‐indigenous species that combines both perspectives. Since the opening of the Suez Canal, hundreds of species have invaded the Mediterranean from the Red Sea, forming a unique system in which the entire species pool (donor, non‐indigenous and recipient) is known. Focusing on species ecological traits, we assess the drivers underlying the establishment of non‐indigenous species from the onset of the invasion to the present. Location The Mediterranean and Red Seas. Methods We compiled traits for shallow‐water hard‐bottom‐associated fishes in the Mediterranean (recipient community) and the Red Sea (donor community). We compared the multivariate community trait structure of non‐indigenous species with the donor and recipient assemblages, using a novel method to objectively assign trait‐weights, thereby increasing the robustness of the results. Patterns were contrasted with two types of null models which provide distinct insights into the ecological processes. Results Non‐indigenous fishes are very diverse ecologically, substantially increasing the total community trait diversity of the Mediterranean. Trait similarity between non‐indigenous and indigenous Mediterranean species was lower than expected, indicating that non‐indigenous fishes tend to occupy relatively vacant niches within the Mediterranean. However, we further found that over time non‐indigenous species display increased trait similarity to indigenous Mediterranean species. This suggests that trait constraints associated with successful establishment are weakening. Main conclusions Non‐indigenous species establish in relatively vacant ecological niches, opening the possibility for predicting establishment using ecological traits. However, the weakening of trait constraints through time suggests that forecasting future establishment may be difficult. Faced with an accelerating pace of invasion, it appears that the Mediterranean is going to be transformed into an extension of the Red Sea in terms of trait and species composition.
    Type of Medium: Online Resource
    ISSN: 1466-822X , 1466-8238
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2017
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  • 4
    In: Journal of Biogeography, Wiley, Vol. 47, No. 10 ( 2020-10), p. 2194-2209
    Abstract: The ‘abundant centre’ hypothesis states that species are more abundant at the centre of their range. However, several recent large‐scale studies have failed to find evidence for such a pattern. Here we used extensive global data of reef fishes to test the ‘abundant centre’ pattern, and to examine variation in the abundance patterns across species using life history and ecological traits. Location Marine habitat at a global extent: from Indo‐Pacific to Atlantic reefs. Methods We used underwater visual estimates of fish abundance, containing 22,963 transects and 1,215 species. For each species we calculated the slope between abundance and distance to the range centre, with the range centre estimated using four different methods. We tested whether abundance patterns differ between the range core and margins using segmented regression. Meta‐analytic methods were used to synthesize results across species, and to test whether species traits can explain variation in the fit to the pattern among species. Results The method used to define the range centre had a large effect on the results. Nevertheless, in all cases we found large variation between species. Results of the segmented regression revealed that changes in abundance across the range core are very small and that steep declines in abundance happen only towards the range margins. Body size and mean abundance were the main traits affecting the fit to the pattern across species. Main conclusions We find large variation across species in the fit to the abundance centre pattern. Nevertheless, we do find support for a general pattern of a range core with high, but variable, abundance and steep decline in abundance towards the range periphery. Thus, species do tend to be rare at the range margins, making them sensitive to extirpation due to both natural and anthropogenic impacts.
    Type of Medium: Online Resource
    ISSN: 0305-0270 , 1365-2699
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2020
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  • 5
    In: Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 111, No. 38 ( 2014-09-23), p. 13757-13762
    Abstract: When tropical systems lose species, they are often assumed to be buffered against declines in functional diversity by the ability of the species-rich biota to display high functional redundancy: i.e., a high number of species performing similar functions. We tested this hypothesis using a ninefold richness gradient in global fish faunas on tropical reefs encompassing 6,316 species distributed among 646 functional entities (FEs): i.e., unique combinations of functional traits. We found that the highest functional redundancy is located in the Central Indo-Pacific with a mean of 7.9 species per FE. However, this overall level of redundancy is disproportionately packed into few FEs, a pattern termed functional over-redundancy (FOR). For instance, the most speciose FE in the Central Indo-Pacific contains 222 species (out of 3,689) whereas 38% of FEs (180 out of 468) have no functional insurance with only one species. Surprisingly, the level of FOR is consistent across the six fish faunas, meaning that, whatever the richness, over a third of the species may still be in overrepresented FEs whereas more than one third of the FEs are left without insurance, these levels all being significantly higher than expected by chance. Thus, our study shows that, even in high-diversity systems, such as tropical reefs, functional diversity remains highly vulnerable to species loss. Although further investigations are needed to specifically address the influence of redundant vs. vulnerable FEs on ecosystem functioning, our results suggest that the promised benefits from tropical biodiversity may not be as strong as previously thought.
    Type of Medium: Online Resource
    ISSN: 0027-8424 , 1091-6490
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    Language: English
    Publisher: Proceedings of the National Academy of Sciences
    Publication Date: 2014
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  • 6
    In: Scientific Data, Springer Science and Business Media LLC, Vol. 6, No. 1 ( 2019-07-04)
    Abstract: The emergence of DNA barcoding and metabarcoding opened new ways to study biological diversity, however, the completion of DNA barcode libraries is fundamental for such approaches to succeed. This dataset is a DNA barcode reference library (fragment of Cytochrome Oxydase I gene) for 2,190 specimens representing at least 540 species of shore fishes collected over 10 years at 154 sites across the four volcanic archipelagos of French Polynesia; the Austral, Gambier, Marquesas and Society Islands, a 5,000,000 km 2 area. At present, 65% of the known shore fish species of these archipelagoes possess a DNA barcode associated with preserved, photographed, tissue sampled and cataloged specimens, and extensive collection locality data. This dataset represents one of the most comprehensive DNA barcoding efforts for a vertebrate fauna to date. Considering the challenges associated with the conservation of coral reef fishes and the difficulties of accurately identifying species using morphological characters, this publicly available library is expected to be helpful for both authorities and academics in various fields.
    Type of Medium: Online Resource
    ISSN: 2052-4463
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2019
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  • 7
    In: Nature Ecology & Evolution, Springer Science and Business Media LLC, Vol. 6, No. 6 ( 2022-04-04), p. 701-708
    Type of Medium: Online Resource
    ISSN: 2397-334X
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2022
    detail.hit.zdb_id: 2879715-2
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  • 8
    Online Resource
    Online Resource
    American Association for the Advancement of Science (AAAS) ; 2014
    In:  Science Vol. 344, No. 6187 ( 2014-05-30), p. 1016-1019
    In: Science, American Association for the Advancement of Science (AAAS), Vol. 344, No. 6187 ( 2014-05-30), p. 1016-1019
    Abstract: The most prominent pattern in global marine biogeography is the biodiversity peak in the Indo-Australian Archipelago. Yet the processes that underpin this pattern are still actively debated. By reconstructing global marine paleoenvironments over the past 3 million years on the basis of sediment cores, we assessed the extent to which Quaternary climate fluctuations can explain global variation in current reef fish richness. Comparing global historical coral reef habitat availability with the present-day distribution of 6316 reef fish species, we find that distance from stable coral reef habitats during historical periods of habitat loss explains 62% of the variation in fish richness, outweighing present-day environmental factors. Our results highlight the importance of habitat persistence during periods of climate change for preserving marine biodiversity.
    Type of Medium: Online Resource
    ISSN: 0036-8075 , 1095-9203
    RVK:
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    Language: English
    Publisher: American Association for the Advancement of Science (AAAS)
    Publication Date: 2014
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    detail.hit.zdb_id: 2066996-3
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  • 9
    In: Journal of Biogeography, Wiley, Vol. 48, No. 10 ( 2021-10), p. 2469-2485
    Abstract: Several drivers explain the global distribution of all reef fish. However, whether these drivers also explain the distribution and traits of a functional subgroup involving cleaner fishes remain unclear. Here we examine the variation in traits of cleaner fishes and test whether historical, environmental, ecological and geographical drivers are correlated with cleaner species richness and abundance at global reefs. Location Tropical and subtropical reefs. Taxon Actinopterygii. Methods We tested whether species traits and trait space vary between facultative ( i . e . species that clean only during the juvenile stages or sporadically) and dedicated ( i . e . species that clean during their whole lives) cleaner types. We compiled data from local checklists (relative richness) and belt transects (standardized richness and abundance). We built four models to test whether past and current isolation ( i . e . distance from Quaternary refugia and biodiversity centres), sea temperature, primary productivity, local species pool and abundance of potential clients influenced the relative richness and abundance of cleaners. Results Facultative cleaners had high trait variability that contributed disproportionally to the trait space, whereas dedicated cleaners exhibited low trait variability. Cleaner species richness was higher in the Indo‐Pacific and Caribbean provinces, but the relative richness and standardized abundance of cleaners were higher in the Atlantic ( i . e . North Eastern and Southwestern) and Eastern Pacific. Isolation influenced the relative richness of facultative cleaners, whereas the distance to Quaternary refugia, sea temperature and isolation influenced the relative richness of dedicated cleaners. Local species richness and standardized abundance of cleaner fish exhibited a strong relationship with regional diversity. The standardized abundance of both facultative and dedicated cleaners was influenced by the abundance of potential clients and the local species pool. Main conclusions The small trait space occupied by cleaner fishes may reflect their restricted origin among lineages of reef fishes. Differences in the relative richness and standardized abundance of cleaner fishes across marine realms suggest a strong influence on biogeographical history. Our results also indicate that cleaner fishes originated mostly in peripheral areas in high latitudes due to the absence of dedicated cleaners. Our results imply that cleaner fishes do not follow the pattern of main centres of origin described for reef fishes due to opportunistic cleaning behaviour that originated with higher frequency at locations with low species richness.
    Type of Medium: Online Resource
    ISSN: 0305-0270 , 1365-2699
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2021
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    detail.hit.zdb_id: 188963-1
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  • 10
    In: Journal of Biogeography, Wiley, Vol. 40, No. 12 ( 2013-12), p. 2228-2237
    Abstract: The delineation of regions is a critical procedure in biogeography, but there is still no consensus about the best approach. Traditionally, a compositional dissimilarity index and a clustering algorithm are used to partition locations into regions. However, the choice of index and algorithm may have a profound impact on the final result, particularly when locations display different levels of species richness and when they are nested within each other. Our objective was to estimate the influence of species nestedness among locations on the delineation of biogeographical regions. Location As a case study, we used coral reef fishes (families Chaetodontidae, Pomacentridae and Labridae) from the Indo‐Pacific, where a large richness gradient extends, often as a series of nested assemblages, from the species‐rich Indo‐Australian Archipelago (Coral Triangle) to species‐poor peripheral locations. Methods We used the turnover and nestedness components of the Sørensen and Jaccard dissimilarity indices to estimate the effect of nestedness on the delineation of biogeographical regions. In addition, we compared the results with those obtained using a parsimony analysis of endemicity ( PAE ). Results Low Mantel correlation values revealed that the PAE method assembled locations in a very different way than methods based on dissimilarity indices for Indo‐Pacific coral reef fishes. We also found that nestedness mattered when delineating biogeographical units because, for both the Sørensen and the Jaccard indices, reef fish assemblages were grouped differently depending on whether we used the turnover component of each index or the complete index, including the nestedness component. The turnover component ignored variation in species richness attributable to differences in habitat area between locations, and permitted a delineation based solely on species replacement. Main conclusions We demonstrate that the choice of the component used to measure dissimilarity between species assemblages is critical, because it may strongly influence regional delineations, at least for Indo‐Pacific coral reef fishes. We conclude that the two components of the dissimilarity indices can reveal complementary insights into the role that history may have played in shaping extant patterns of biodiversity.
    Type of Medium: Online Resource
    ISSN: 0305-0270 , 1365-2699
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2013
    detail.hit.zdb_id: 2020428-0
    detail.hit.zdb_id: 188963-1
    SSG: 12
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