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  • 1
    In: Biotechnology and Bioengineering, Wiley, Vol. 111, No. 6 ( 2014-06), p. 1150-1160
    Abstract: Phosphoenolpyruvate (PEP) is a precursor involved in the biosynthesis of aromatics and other valuable compounds in Escherichia coli . The PEP:carbohydrate phosphotransferase system (PTS) is the major glucose transport system and the largest PEP consumer. To increase intracellular PEP availability for aromatics production purposes, mutant strains of E. coli JM101 devoid of the ptsHIcrr operon (PB11 strain) have been previously generated. In this derivative, transport and growth rate on glucose decreased significantly. A laboratory evolved strain derived from PB11 that partially recovered its growth capacity on glucose was named PB12. In the present study, we blocked carbon skeletons interchange between PEP and pyruvate (PYR) in these ptsHIcrr − strains by deleting the pykA , pykF , and ppsA genes. The PB11 pykAF − ppsA − strain exhibited no growth on glucose or acetate alone, but it was viable when both substrates were consumed simultaneously. In contrast, the PB12 pykAF − ppsA − strain displayed a low growth rate on glucose or acetate alone, but in the mixture, growth was significantly improved. RT‐qPCR expression analysis of PB11 pykAF − ppsA − growing with both carbon sources showed a downregulation of all central metabolic pathways compared with its parental PB11 strain. Under the same conditions, transcription of most of the genes in PB12 pykAF − ppsA − did not change, and few like aceBAK , sfcA , and poxB were overexpressed compared with PB12. We explored the aromatics production capabilities of both ptsHIcrr − pykAF − ppsA − strains and the engineered PB12 pykAF − ppsA − tyrR − pheA ev2 + / pJLB aroG fbr tktA enhanced the yield of aromatic compounds when coutilizing glucose and acetate compared with the control strain PB12 tyrR − pheA ev2+ /pJLB aroG fbr tktA . Biotechnol. Bioeng. 2014;111: 1150–1160. © 2013 The Authors. Biotechnology and Bioengineering Published by Wiley Periodicals, Inc.
    Type of Medium: Online Resource
    ISSN: 0006-3592 , 1097-0290
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2014
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    detail.hit.zdb_id: 280318-5
    SSG: 12
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  • 2
    In: Ibis, Wiley, Vol. 165, No. 1 ( 2023-01), p. 270-287
    Abstract: Genetic structure and phylogeographic patterns of natural populations are of great importance in assessing the conservation status of species. These population properties can be estimated using molecular markers of either mitochondrial DNA (mtDNA) or nuclear DNA (nDNA) to understand the historical, ecological and dispersal patterns that influence genetic exchange within and between populations. Basilinna xantusii is a sexually dimorphic hummingbird endemic to the Baja California Peninsula (BCP). It comprises three ancestral mitochondrial lineages linked to vicariant events, late Pleistocene climate changes and the geographical distribution of oases. This study aimed to determine and understand the current population genetic structure of this hummingbird. The genotypes of 16 microsatellite loci from 100 individuals collected across the geographical range of this species were compared with mtDNA sequences previously published. Cluster analyses identified five populations, two with almost no genetic admixture in the northern part of the BCP and three others with varying levels of admixed ancestry across the BCP. In San José de Magdalena, at the northernmost end of the range of Xantus's Hummingbird, 40% of individuals collected belong to one genetic cluster and the remaining 60% to another, both genetic clusters showing very little admixed ancestry. We hypothesize that, despite being in sympatry, these individuals do not interbreed, unlike the other populations where individuals showed ancestry coefficients of the other genetic groups. The philopatric behaviour of males and the long‐range dispersal capacity of females probably determine the observed genetic differentiation pattern. The mito‐nuclear discordance detected could be due to the molecular markers used and to female‐biased dispersal. Gene flow is asymmetric in this species, being greater from north to south than vice versa, which is probably related to differences in the seasonality of precipitation across the BCP and to urbanization of the oases.
    Type of Medium: Online Resource
    ISSN: 0019-1019 , 1474-919X
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2023
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    detail.hit.zdb_id: 2485031-7
    detail.hit.zdb_id: 2807-1
    SSG: 12
    Location Call Number Limitation Availability
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