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  • 1
    Online Resource
    Online Resource
    Planktosalinus lacus gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from a salt lake
    Microbiology Society ; 2016
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 66, No. 5 ( 2016-05-01), p. 2084-2089
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 66, No. 5 ( 2016-05-01), p. 2084-2089
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000997
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2016
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    Ornithinimicrobium tianjinense sp. nov., isolated from a recirculating aquaculture system
    Microbiology Society ; 2013
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 63, No. Pt_12 ( 2013-12-01), p. 4489-4494
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 63, No. Pt_12 ( 2013-12-01), p. 4489-4494
    Abstract: A Gram-positive, strictly aerobic and heterotrophic, non-spore-forming actinobacterium (strain B2 T ) isolated from a recirculating aquaculture system was studied for its taxonomic position. Strain B2 T formed a rudimentary substrate-mycelium that fragmented into short rod-shaped to coccoid cells (0.5 µm×0.5–2.2 µm or 0.5–1.0 µm in diameter). Colonies were yellow, smooth, circular and 1.5–2.0 mm in diameter after incubation on TSA for 3 days at 30 °C. Strain B2 T grew at 20–40 °C (optimal, 30 °C) and pH 5.5–9.5 (optimal, 6.5–7.0) and in the presence of 0–9 % (w/v) NaCl (optimal, 1 %). The predominant menaquinone of strain B2 T was MK-8(H 4 ). The cell-wall peptidoglycan of strain B2 T contained the amino acids ornithine, glutamic acid, alanine, glycine and aspartic acid. The major polar lipids were phosphatidylglycerol and diphosphatidylglycerol. The major fatty acids were iso-C 15 : 0 , iso-C 16 : 0 and summed feature 9. Its DNA G+C content was 68.3 mol% ( T m ). Analysis of 16S rRNA gene sequences indicated that strain B2 T was related phylogenetically to members of the genus Ornithinimicrobium with highest similarity (96.6 %) to Ornithinimicrobium kibberense DSM 17687 T , followed by Ornithinimicrobium humiphilum DSM 12362 T (96.3 %), Ornithinimicrobium pekingense LW6 T (96.2 %) and Ornithinimicrobium murale 01-Gi-040 T (94.8 %). On basis of phenotypic, chemotaxonomic and phylogenetic data, it was concluded that strain B2 T represents a novel species of the genus Ornithinimicrobium , for which the name Ornithinimicrobium tianjinense sp. nov. is proposed. The type strain is B2 T ( = CGMCC 1.12160 T  = JCM 18464 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.052514-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2013
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Wenyingzhuangia marina gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from a recirculating mariculture system
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_2 ( 2014-02-01), p. 469-474
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_2 ( 2014-02-01), p. 469-474
    Abstract: A Gram-stain-negative, strictly aerobic and heterotrophic bacterial strain, designed strain D1 T , was isolated from a recirculating mariculture system in Tianjin, China. Its taxonomic position was determined using a polyphasic approach. Cells of strain D1 T were non-flagellated short rods, 0.3–0.5 µm wide and 0.5–1.0 µm long. Growth was observed at 15–30 °C (optimum, 25 °C), at pH 5.5–9.0 (optimum, pH 6.5–7.0) and in the presence of 1–8 % (w/v) NaCl (optimum, 2–3 %). Cells contained carotenoid pigments but not flexirubin-type pigments. Strain D1 T contained MK-6 as the sole menaquinone and phosphatidylethanolamine (PE) as the sole phospholipid and four unidentified lipids. The major cellular fatty acids ( 〉 10 %) were iso-C 15 : 0 (23.2 %), iso-C 17 : 0 3-OH (15.2 %), C 16 : 1 ω7 c /C 16 : 1 ω6 c (14.3 %), iso-C 15 : 0 3-OH (13.5 %) and iso-C 15 : 1 G (10.8 %). 16S rRNA gene sequence analyses indicated that strain D1 T belonged to the family Flavobacteriaceae and showed closest phylogenetic relationship to the genus Lutibacter , with highest sequence similarity to Lutibacter aestuarii MA-My1 T (92.2 %). The DNA G+C content of strain D1 T was 35.9 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain D1 T was considered to represent a novel species in a new genus of the family Flavobacteriaceae , for which the name Wenyingzhuangia marina gen. nov., sp. nov. is proposed. The type strain of the type species is D1 T ( = CGMCC 1.12162 T  = JCM 18494 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.055012-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    Psychroflexus salis sp. nov. and Psychroflexus planctonicus sp. nov., isolated from a salt lake
    Microbiology Society ; 2016
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 66, No. 1 ( 2016-01-01), p. 125-131
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 66, No. 1 ( 2016-01-01), p. 125-131
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000687
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2016
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    Vibrio salilacus sp. nov., a new member of the Anguillarum clade with six alleles of the 16S rRNA gene from a saline lake
    Microbiology Society ; 2015
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 65, No. Pt_8 ( 2015-08-01), p. 2653-2660
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 65, No. Pt_8 ( 2015-08-01), p. 2653-2660
    Abstract: A Gram-stain-negative, catalase- and oxidase-positive, facultatively aerobic bacterium, strain DSG-S6 T , was isolated from Dasugan Lake (salinity 3.1 %, w/w), China. Its taxonomic position was determined by using a polyphasic approach. Cells of strain DSG-S6 T were non-spore-forming, slightly bent rods, and motile by means of a single polar flagellum. Growth occurred in the presence of 0–7.0  % (w/v) NaCl (optimum, 2.0  %), at 4–35 °C (optimum, 30 °C) and at pH 6.0–10.5 (optimum, pH 8.0–8.5). C 16 : 0 , C 18 : 1 ω7 c and C 16 : 1 ω7 c and/or C 16 : 1 ω6 c were the major fatty acids. Six alleles of the 16S rRNA gene sharing 98.9–99.9  % similarity were detected in strain DSG-S6 T , which showed highest 16S rRNA gene sequence similarity to Vibrio aestuarianus ATCC 35048 T (97.7  %), then to Vibrio pacinii LMG 19999 T (97.6  %) and Vibrio metschnikovii CIP 69.14 T (96.8  %). Multilocus sequence analysis of four housekeeping genes and 16S rRNA genes clearly clustered it as a member of the Anguillarum clade. Mean DNA–DNA relatedness between strain DSG-S6 T and V. aestuarianus NBRC 15629 T , V. pacinii CGMCC 1.12557 T and V. metschnikovii JCM 21189 T was 20.6 ± 2.3, 38.1 ± 3.5 and 24.2 ± 2.8  %, respectively. The DNA G+C content was 46.8 mol% ( T m ). Based on the data, it is concluded that strain DSG-S6 T represents a novel species of the genus Vibrio , for which the name Vibrio salilacus sp. nov. is proposed. The type strain is DSG-S6 T ( = CGMCC 1.12427 T  = JCM 19265 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.000316
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2015
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 6
    Online Resource
    Online Resource
    Pseudomonas salina sp. nov., isolated from a salt lake
    Microbiology Society ; 2015
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 65, No. Pt_9 ( 2015-09-01), p. 2846-2851
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 65, No. Pt_9 ( 2015-09-01), p. 2846-2851
    Abstract: A Gram-staining-negative, facultatively aerobic bacterium, strain XCD-X85 T , was isolated from Xiaochaidan Lake, a salt lake (salinity 9.9  %, w/v) in Qaidam basin, Qinghai province, China. Its taxonomic position was determined by using a polyphasic approach. Cells of strain XCD-X85 T were non-endospore-forming rods, 0.4–0.6 μm wide and 1.0–1.6 μm long, and motile by means of a single polar flagellum. Strain XCD-X85 T was catalase- and oxidase-positive. Growth was observed in the presence of 0–12.0  % (w/v) NaCl (optimum, 1.0–2.0  %) and at 4–35 °C (optimum, 25–30 °C) and pH 6.5–10.5 (optimum, pH 8.0–8.5). Strain XCD-X85 T contained ( 〉 10  %) summed feature 8 (C 18 : 1 ω7 c and/or C 18 : 1 ω6 c ), C 12 : 0 , C 16 : 0 and summed feature 3 (C 16 : 1 ω7 c and/or C 16 : 1 ω6 c ) as the predominant fatty acids. The major respiratory quinone was ubiquinone 9 (Q-9). The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol. The DNA G+C content was 57.4 mol%. Phylogenetic trees based on 16S rRNA gene sequences showed that strain XCD-X85 T was associated with the genus Pseudomonas , and showed highest 16S rRNA gene sequence similarities to Pseudomonas pelagia CL-AP6 T (99.0  %) and Pseudomonas bauzanensis BZ93 T (96.8  %). DNA–DNA relatedness of strain XCD-X85 T to P. pelagia JCM 15562 T was 19 ± 1  %. On the basis of the data presented above, it is concluded that strain XCD-X85 T represents a novel species of the genus Pseudomonas , for which the name Pseudomonas salina sp. nov. is proposed. The type strain is XCD-X85 T ( = CGMCC 1.12482 T  = JCM 19469 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.000341
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2015
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 7
    Online Resource
    Online Resource
    Idiomarina planktonica sp. nov., isolated from a saline lake
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_10 ( 2014-10-01), p. 3411-3416
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_10 ( 2014-10-01), p. 3411-3416
    Abstract: A Gram-stain-negative bacterium, strain TS-T11 T , was isolated from Tuosu lake, a saline lake (salinity 5.4 %, w/v) in the Qaidam basin, Qinghai province, China. Its taxonomic position was determined by using a polyphasic approach. Cells of strain TS-T11 T were non-spore-forming rods, 0.6–0.8 µm wide and 0.8–2.2 µm long, and motile by means of a single polar flagellum. Strain TS-T11 T was strictly heterotrophic and aerobic. Cells were positive for catalase and oxidase. Growth was observed in the presence of 0.5–11.0 % (w/v) NaCl (optimum 4.0–6.0 %), at 4–40 °C (optimum 30–35 °C) and at pH 6.0–10.5 (optimum pH 7.5–8.5). Strain TS-T11 T contained iso-C 15 : 0 , iso-C 17 : 0 and iso-C 17 : 1 ω9 c as the predominant fatty acids ( 〉 10 %). The major respiratory quinone was Q-8. The polar lipids consisted of a mixture of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and nine uncharacterized phospholipids. The G+C content of genomic DNA was 46.8 mol% ( T m ). Phylogenetic trees based on 16S rRNA gene sequences showed that strain TS-T11 T was associated with the genus Idiomarina , and showed highest 16S rRNA gene sequence similarity to Idiomarina aestuarii KYW314 T (97.4 %) and Idiomarina salinarum ISL-52 T (97.4 %). DNA–DNA relatedness of strain TS-T11 T to I. aestuarii JCM 16344 T and I. salinarum DSM 21900 T was 22.2±2.4 and 11.5±1.6 %, respectively. Based on the data presented above, it was concluded that strain TS-T11 T represents a novel species of the genus Idiomarina , for which the name Idiomarina planktonica sp. nov. is proposed. The type strain is TS-T11 T ( = CGMCC 1.12458 T  = JCM 19263 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.065938-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 8
    Online Resource
    Online Resource
    Marivita lacus sp. nov., isolated from a saline lake
    Microbiology Society ; 2015
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 65, No. Pt_6 ( 2015-06-01), p. 1889-1894
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 65, No. Pt_6 ( 2015-06-01), p. 1889-1894
    Abstract: A Gram-staining-negative, strictly heterotrophic and aerobic bacterium, strain TS-T44 T , was isolated from a saline lake, Tuosu Lake in Qaidam basin, Qinghai province, China. Its taxonomic position was investigated using a polyphasic approach. Cells of strain TS-T44 T were non-endospore-forming, non-motile rods, 0.8–1.2 μm wide and 1.2–3.0 μm long. Catalase- and oxidase-positive. Growth occurred in the presence of up to 8  % (w/v) NaCl (optimum, 3.0  %) and at 15–35 °C (optimum, 25 °C) and pH 7.0–10.0 (optimum, pH 7.5–8.5). C 18 : 1 ω7 c was the predominant fatty acid. The major respiratory quinone was Q-10. The major polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminolipid and an unknown lipid. The DNA G+C content was 65.5 mol% [determined from the melting temperature ( T m)]. Phylogenetic trees based on 16S rRNA gene sequences showed that strain TS-T44 T was associated with the genus Marivita and showed highest sequence similarity to Marivita cryptomonadis CL-SK44 T (97.7  %), Marivita litorea CL-JM1 T (97.5  %) and Marivita geojedonensis DPG-138 T (97.3  %), and 〈  97  % to other species. DNA–DNA relatedness of strain TS-T44 T to M. cryptomonadis JCM 15447 T , M. litorea JCM 15446 T and M. geojedonensis KCTC 23882 T was 23 ± 3  %, 33 ± 4  % and 35 ± 2  %, respectively. Based on the data presented, it is concluded that strain TS-T44 T represents a novel species of the genus Marivita , for which the name Marivita lacus sp. nov. is proposed. The type strain is TS-T44 T ( = CGMCC 1.12478 T  = JCM 19516 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.000195
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2015
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 9
    Online Resource
    Online Resource
    Aquisalinus flavus gen. nov., sp. nov., a member of the family Parvularculaceae isolated from a saline lake
    Microbiology Society ; 2016
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 66, No. 4 ( 2016-04-01), p. 1813-1817
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 66, No. 4 ( 2016-04-01), p. 1813-1817
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijsem.0.000950
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2016
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 10
    Online Resource
    Online Resource
    Flavobacterium caeni sp. nov., isolated from a sequencing batch reactor for the treatment of malachite green effluents
    Microbiology Society ; 2010
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 60, No. 2 ( 2010-02-01), p. 417-421
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 60, No. 2 ( 2010-02-01), p. 417-421
    Abstract: A Gram-stain-negative, heterotrophic, aerobic, non-spore-forming and non-motile bacterial strain, designated LM5 T , was isolated from activated sludge from a sequencing batch reactor for the treatment of effluents contaminated by malachite green. The taxonomy of strain LM5 T was studied by phenotypic and phylogenetic methods. Strain LM5 T formed orange colonies on R2A and YP plates. Cells were rods, 0.4–0.6 μm in diameter and 0.8–1.2 μm in length. Growth occurred at 10–35 °C (optimum, 20–25 °C), at pH 5.5–9.5 (optimum, pH 6.5–7.5) and in the presence of 0–2 % (w/v) NaCl (optimum, 0.5 %). Oxidase and catalase activities were present. Flexirubin-type pigments were present, but extracellular glycans were absent. MK-6 was the major respiratory quinone. The major fatty acids were iso-C 15 : 0 (28.3 %) and iso-C 17 : 1 ω 9 c (13.8 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain LM5 T was a member of the genus Flavobacterium with highest sequence similarity to Flavobacterium soli DS-6 T (93.2 %) and Flavobacterium lindanitolerans IP-10 T (92.9 %). Together with F. lindanitolerans IP-10 T , strain LM5 T formed a distinct lineage in the phylogenetic tree. The DNA G+C content was 52±0.6 mol% (HPLC), which is significantly higher than that of other species of the genus Flavobacterium (30–41 mol%). Based on phylogenetic and phenotypic evidence, strain LM5 T is considered to represent a novel species of the genus Flavobacterium , for which the name Flavobacterium caeni sp. nov. is proposed; the type strain is LM5 T (=CGMCC 1.7031 T =NBRC 104239 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.010603-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2010
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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