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  • Canadian Science Publishing  (3)
  • Biodiversity Research  (3)
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  • Canadian Science Publishing  (3)
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  • Biodiversity Research  (3)
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  • 1
    In: Canadian Journal of Microbiology, Canadian Science Publishing, Vol. 66, No. 11 ( 2020-11), p. 605-622
    Abstract: The diversity of the microbial compositions of the root-zone soil (the rhizosphere-surrounding soil) and root endosphere (all inner root tissues) of Pinus tabulaeformis Carr. and Ginkgo biloba L. were evaluated in Xiong’an New Area using high-throughput sequencing; the influence of the soil edaphic parameters on microbial community compositions was also evaluated. Our results showed that both the taxonomic and phylogenetic diversities of the root endosphere were lower than those of the root-zone soil, but the variation in the endosphere microbial community structure was remarkably higher than that of the root-zone soil. Spearman correlation analysis showed that the soil organic matter, total nitrogen, total phosphate, total potassium, ratio of carbon to nitrogen, and pH significantly explained the α-diversity of the bacterial community and that total nitrogen differentially contributed to the α-diversity of the fungal community. Variation partitioning analysis showed that plant species had a greater influence on microbial composition variations than did any other soil property, although soil chemical parameters explained more variation when integrated. Together, our results suggest that both plant species and soil chemical parameters played a critical role in shaping the microbial community composition.
    Type of Medium: Online Resource
    ISSN: 0008-4166 , 1480-3275
    RVK:
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2020
    detail.hit.zdb_id: 280534-0
    detail.hit.zdb_id: 1481972-7
    SSG: 12
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  • 2
    In: Canadian Journal of Plant Science, Canadian Science Publishing, Vol. 92, No. 7 ( 2012-11), p. 1381-1388
    Abstract: Zhang, W.-B., Jiang, H.-W., Qiu, P.-C., Liu, C.-Y., Chen, F.-L., Xin, D.-W., Li, C.-D., Hu, G.-H. and Chen, Q.-S. 2012. Genetic overlap of QTL associated with low-temperature tolerance at germination and seedling stage using BILs in soybean. Can. J. Plant Sci. 92: 1381–1388. Low temperature is one of the critical environmental factors that limit agricultural production worldwide. In northeast China soybean frequently suffers low temperature stress, especially at germination stage and seedling stage. The most effective way to solve this problem is to breed cultivars with low-temperature tolerance. A set of advanced backcross introgression lines was constructed with Hongfeng 11 as recurrent parent, which was a local variety in Heilongjiang province, and Harosoy as donor parent, which was introduced from Canada. Their BC 2 F 4 lines were screened in low-temperature condition at the two stages, and 41 transgressive lines were selected out at germination stage and 45 lines at seedling stage. Sixty-four and fifty-one pairs of simple sequence repeat primers with fine polymorphism were used for genotyping the selected population and random population at the two stages, respectively. Related quantitative trait loci (QTL) were obtained by chi-test and ANOVA analysis with genotypic and phenotypic data. Finally, 25 QTL at germination stage and 13 QTL at seedling stage were mapped. Among them, 10 QTL overlapped between two stages, which showed a partial genetic crossover on low-temperature tolerance stages in soybean. This would play an important role in marker-assisted selection for breeding elite variety with low-temperature tolerance at both stages.
    Type of Medium: Online Resource
    ISSN: 0008-4220 , 1918-1833
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2012
    detail.hit.zdb_id: 2016989-9
    SSG: 12
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  • 3
    In: Genome, Canadian Science Publishing, Vol. 66, No. 4 ( 2023-04-01), p. 80-90
    Abstract: Polygonatum cyrtonema Hua is a traditional Chinese herb medicine, and it is widely distributed in China. The intrageneric taxonomy and phylogenetic relationships within Polygonatum have long been controversial due to their morphological similarity and lacking special DNA barcodes. In this paper, the complete chloroplast genome is a relatively conserved quadripartite structure including a large single copy region of 84 711 bp, a small single copy region of 18 210 bp, and a pair of inverted repeats region of 26 142 bp. A total of 342 simple sequence repeats were identified, and most of them were found to be composed of A/T, including 126 mono-nucleotides and 179 di-nucleotides. Nucleotide diversity was analyzed and eight highly variable regions (psbl∼trnT-CGU, atpF∼atpH, trnT-GGU∼psbD, psaJ∼rps20, trnL-UAG∼ndhD, ndhG∼ndhl, ndhA, and rpl32∼ccsA) were identified as potential molecular markers. Phylogenetic analysis based on the whole chloroplast genome showed that P. cyrtonema, within the family Asparagaceae, is closely related to Polygonatum sibiricum and Polygonatum kingianum. The sequence matK, trnT-GGU & ccsA, and ndhG∼ndhA were identified as three DNA barcodes. The assembly and comparative analysis of P. cyrtonema complete chloroplast genome will provide essential molecular information about the evolution and molecular biology for further study.
    Type of Medium: Online Resource
    ISSN: 0831-2796 , 1480-3321
    Language: English
    Publisher: Canadian Science Publishing
    Publication Date: 2023
    detail.hit.zdb_id: 2020635-5
    SSG: 12
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