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  • Suzuki, Ken-ichiro  (8)
  • Biodiversity Research  (8)
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  • Biodiversity Research  (8)
  • 1
    Online Resource
    Online Resource
    Angustibacter luteus gen. nov., sp. nov., isolated from subarctic forest soil
    Microbiology Society ; 2010
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 60, No. 10 ( 2010-10-01), p. 2441-2445
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 60, No. 10 ( 2010-10-01), p. 2441-2445
    Abstract: An actinobacterial strain was isolated from subarctic forest soil, and subjected to polyphasic taxonomic characterization. The cell-wall peptidoglycan comprised meso -diaminopimelic acid, alanine and glutamic acid. MK-9(H 4 ) was the predominant isoprenoid quinone, and iso-C 17 : 0 , iso-C 15 : 0 and C 16 : 0 were detected as the major cellular fatty acids. Phylogenetic analyses based on 16S rRNA gene sequences showed that this organism was related to members of the suborders Kineosporiineae and Micrococcineae . The phenotypic properties readily differentiated this organism from the phylogenetic neighbours. Based on the phenotypic and genotypic evidence, the strain is assigned to a novel species of a novel genus: Angustibacter luteus gen. nov., sp. nov. with type strain TT07R-79 T (=NBRC 105387 T =KACC 14249 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.019448-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2010
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    Amycolatopsis helveola sp. nov. and Amycolatopsis pigmentata sp. nov., isolated from soil
    Microbiology Society ; 2010
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 60, No. 11 ( 2010-11-01), p. 2629-2633
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 60, No. 11 ( 2010-11-01), p. 2629-2633
    Abstract: Three short spore chain-forming actinomycete strains were isolated from soil samples collected from subtropical islands in Japan. The cell-wall peptidoglycan of these strains contained meso -diaminopimelic acid ( meso -A 2 pm), glutamic acid and alanine. The major isoprenoid quinone was MK-9(H 4 ), iso-C 16 : 0 and 2-OH iso-C 16 : 0 were the major cellular fatty acids and phosphatidylethanolamine was a component of the polar lipids. The G+C content of the genomic DNA was 67–69 mol%. Phylogenetic analyses based on the 16S rRNA gene sequences showed that the novel strains consistently formed a monophyletic cluster with Amycolatopsis taiwanensis . On the basis this polyphasic taxonomical study, it is proposed that the two new isolates represent two novel species: Amycolatopsis helveola (type strain TT00-43 T =NBRC 103394 T =KCTC 19329 T ) and Amycolatopsis pigmentata (type strain TT99-32 T =NBRC 103392 T =KCTC 19330 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.017871-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2010
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Description of Actinomycetospora chibensis sp. nov., Actinomycetospora chlora sp. nov., Actinomycetospora cinnamomea sp. nov., Actinomycetospora corticicola sp. nov., Actinomycetospora lutea sp. nov., Actinomycetospora straminea sp. nov. and Actinomycetospora succinea sp. nov. and emended description of the genus Actinomycetospora
    Microbiology Society ; 2011
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 61, No. 6 ( 2011-06-01), p. 1275-1280
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 61, No. 6 ( 2011-06-01), p. 1275-1280
    Abstract: Eight actinomycete strains that form bud-like spore chains were isolated from various samples collected in Japan. Phylogenetically, the isolates formed a single clade with the type strain of Actinomycetospora chiangmaiensis according to 16S rRNA gene sequence analysis. The isolates contained meso -diaminopimelic acid, d -glutamic acid and d - and l - alanine in the cell-wall peptidoglycan, arabinose and galactose as characteristic sugars, phosphatidylcholine and phosphatidylethanolamine as diagnostic phospholipids, MK-8(H 4 ) as the predominant isoprenoid quinone, iso-C 16 : 0 as the major cellular fatty acid and DNA G+C contents of 72–74 mol%. Actinomycetospora chiangmaiensis , the type species of the genus Actinomycetospora , was also found to contain MK-8(H 4 ) predominantly in our study, although it was earlier reported to contain MK-9(H 4 ) as the predominant isoprenoid quinone. On the basis of the morphological, physiological, chemotaxonomic, phylogenetic and DNA–DNA hybridization data, we concluded that the isolates can be accommodated in the genus Actinomycetospora with emendation of the description of the genus and are assigned to the following seven novel species: Actinomycetospora chibensis sp. nov. (type strain TT04-21 T  = NBRC 103694 T  = KACC 14256 T ), Actinomycetospora chlora sp. nov. (type strain TT07I-57 T  = NBRC 105900 T  = KACC 14252 T ), Actinomycetospora cinnamomea sp. nov. (type strain IY07-53 T  = NBRC 105527 T  = KACC 14250 T ), Actinomycetospora corticicola sp. nov. (type strain 014-5 T  = NBRC 103689 T  = KACC 14253 T ), Actinomycetospora lutea sp. nov. (type strain TT00-04 T  = NBRC 103690 T  = KACC 14254 T ), Actinomycetospora straminea sp. nov. (type strain IY07-55 T  = NBRC 105528 T  = KACC 14251 T ) and Actinomycetospora succinea sp. nov. (type strain TT00-49 T  = NBRC 103691 T  = KACC 14255 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.024166-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2011
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    Catenulispora rubra sp. nov., an acidophilic actinomycete isolated from forest soil
    Microbiology Society ; 2007
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 57, No. 10 ( 2007-10-01), p. 2272-2274
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 57, No. 10 ( 2007-10-01), p. 2272-2274
    Abstract: In the course of screening novel secondary metabolites, an acidophilic actinomycete strain, designated Aac-30 T , was isolated from forest soil and subjected to a polyphasic taxonomic characterization study. It grew well on media in which the pH ranged from 4 to 6, but not on medium with pH adjusted to 7. It possessed ll -diaminopimelic acid and glycine in the cell-wall peptidoglycan, MK-9(H 6 ) and MK-9(H 8 ) as major isoprenoid quinones, iso-C 16 : 0 and anteiso-C 17 : 0 as major cellular fatty acids, and phosphatidylglycerol and phosphatidylinositol as polar lipids. The G+C content of the genomic DNA was 69.1 mol%. Phylogenetic analyses based on 16S rRNA gene sequences showed that the organism belonged to the family Catenulisporaceae and consistently formed a monophyletic cluster with members of the genus Catenulispora . Physiological, biochemical and chemotaxonomic data revealed that this novel organism could be readily differentiated from recognized members of the genus Catenulispora and that it merits separate species status. Based on the phenotypic and genetic evidence presented, strain Aac-30 T is considered to represent a novel species of the genus Catenulispora , for which the name Catenulispora rubra sp. nov. is proposed. The type strain is Aac-30 T (=NBRC 101179 T =DSM 44948 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.65056-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2007
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    Descriptions of Actinoplanes ianthinogenes nom. rev. and Actinoplanes octamycinicus corrig. comb. nov., nom. rev.
    Microbiology Society ; 2011
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 61, No. 12 ( 2011-12-01), p. 2916-2921
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 61, No. 12 ( 2011-12-01), p. 2916-2921
    Abstract: Phylogenetic analysis of ‘ Actinoplanes ianthinogenes ’ Coronelli et al. 1974 and ‘ Actinoplanes ianthinogenes subsp. octamycini ’ Gauze et al. 1979 based on 16S rRNA gene sequencing data revealed that these organisms form a clade in the family Micromonosporaceae . Morphological and chemotaxonomic characteristics of strains of these species were consistent with those of members of the genus Actinoplanes . Morphological, DNA–DNA hybridization, physiological, biochemical and chemotaxonomic data showed that ‘ A. ianthinogenes ’ and ‘ A. ianthinogenes subsp. octamycini ’ can be easily differentiated from each other and that they merit separate species status. On the basis of morphological, physiological, biochemical, chemotaxonomic and DNA–DNA hybridization data, it is concluded that ‘ A. ianthinogenes ’ and ‘ A. ianthinogenes subsp. octamycini ’ should be assigned the status of two novel species: Actinoplanes ianthinogenes nom. rev. (type strain NBRC 13996 T  = A/1668 T  = ATCC 21884 T  = BCRC 13611 T  = DSM 43864 T  = IMSNU 20032 T  = JCM 3249 T  = KCTC 9347 T  = KCTC 9592 T  = NCIMB 12639 T  = NRRL B-16720 T ) and Actinoplanes octamycinicus corrig. comb. nov., nom. rev. (type strain NBRC 14524 T  = INA 4041 T  = ATCC 43632 T  = JCM 9649 T  = KCTC 9593 T ), respectively.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.030130-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2011
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 6
    Online Resource
    Online Resource
    Catenulispora rubra sp. nov., an acidophilic actinomycete isolated from forest soil
    Microbiology Society ; 2007
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 57, No. 12 ( 2007-12-01), p. 2979-2979
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 57, No. 12 ( 2007-12-01), p. 2979-2979
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.65709-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2007
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 7
    Online Resource
    Online Resource
    Virgisporangium aliadipatigenens sp. nov., Isolated from Soil in Iriomote Island and Emended Description of the Genus Virgisporangium
    The Society for Actinomycetes Japan ; 2010
    In:  Actinomycetologica Vol. 24, No. 2 ( 2010), p. 39-44
    Details
    In: Actinomycetologica, The Society for Actinomycetes Japan, Vol. 24, No. 2 ( 2010), p. 39-44
    Type of Medium: Online Resource
    ISSN: 1881-6371 , 0914-5818
    URL: Article
    DOI: 10.3209/saj.SAJ240203
    Language: Unknown
    Publisher: The Society for Actinomycetes Japan
    Publication Date: 2010
    detail.hit.zdb_id: 2394254-X
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  • 8
    Online Resource
    Online Resource
    Agromyces iriomotensis sp. nov. and Agromyces subtropicus sp. nov., isolated from soil
    Microbiology Society ; 2014
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 64, No. Pt_3 ( 2014-03-01), p. 833-838
    Details
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 64, No. Pt_3 ( 2014-03-01), p. 833-838
    Abstract: Three novel Gram-stain-positive bacteria, designated IY07-20 T , IY07-56 T and IY07-113, were isolated from soil samples from Iriomote Island, Okinawa, Japan, and their taxonomic positions were investigated by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence comparisons showed that the three isolates were closely related to the members of the genus Agromyces , with similarity range of 95.6–98.7 %. The isolates contained l -2,4-diaminobutylic acid, d -alanine, d -glutamic acid and glycine in their peptidoglycans. The predominant menaquinone was MK-12 and the major fatty acids were anteiso-C 15 : 0 and anteiso-C 17 : 0 . The DNA G+C contents were 70.9–72.9 mol%. The chemotaxonomic characteristics of the isolates matched those described for members of the genus Agromyces . The results of phylogenetic analysis and DNA–DNA hybridization, along with differences in phenotypic characteristics between strains IY07-20 T , IY07-56 T and IY07-113 and the species of the genus Agromyces with validly published names, indicate that the three isolates merit classification as representatives of two novel species of the genus Agromyces , for which the names Agromyces iriomotensis sp. nov. and Agromyces subtropica sp. nov. are proposed; the type strains are IY07-20 T ( = NBRC 106452 T  = DSM 26155 T ) and IY07-56 T ( = NBRC 106454 T  = DSM 26153 T ), respectively.
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    URL: Article
    DOI: 10.1099/ijs.0.057349-0
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2014
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
    Location Call Number Limitation Availability
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