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  • DeLuca, Neal A.  (7)
  • Biodiversity Research  (7)
  • 1
    Online Resource
    Online Resource
    Informa UK Limited ; 1985
    In:  Molecular and Cellular Biology Vol. 5, No. 8 ( 1985-08-01), p. 1997-2008
    In: Molecular and Cellular Biology, Informa UK Limited, Vol. 5, No. 8 ( 1985-08-01), p. 1997-2008
    Type of Medium: Online Resource
    ISSN: 1098-5549
    Language: English
    Publisher: Informa UK Limited
    Publication Date: 1985
    detail.hit.zdb_id: 1474919-1
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  • 2
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 1987
    In:  Nucleic Acids Research Vol. 15, No. 11 ( 1987), p. 4491-4511
    In: Nucleic Acids Research, Oxford University Press (OUP), Vol. 15, No. 11 ( 1987), p. 4491-4511
    Type of Medium: Online Resource
    ISSN: 0305-1048 , 1362-4962
    RVK:
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 1987
    detail.hit.zdb_id: 1472175-2
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Proceedings of the National Academy of Sciences ; 2003
    In:  Proceedings of the National Academy of Sciences Vol. 100, No. 13 ( 2003-06-24), p. 7871-7876
    In: Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 100, No. 13 ( 2003-06-24), p. 7871-7876
    Abstract: Infection of susceptible cells by herpes simplex virus (HSV) can lead to productive infection or to latency, where the genomes persist in the nuclei of peripheral neurons in a quiescent state. Using the HSV strain d109, which does not express any viral genes and thus establishes a quiescent state in most cells, we observed that a fraction of genomes circularized upon infection. The expression of infected cell protein (ICP) 0, which is known to be involved in reactivation from latency and the promotion of productive infection, inhibited the formation of circular genomes. Circular genomes were not observed upon infection of fully permissive cells by wild-type virus, in either the presence or absence of viral DNA replication. However, productive infection in the absence of ICP0 resulted in the accumulation of a subpopulation of circular genomes. The proportion of circular genomes formed during infection with an ICP0 mutant was greater at low multiplicity of infection, a condition in which ICP0 mutants replicate poorly. In the complete absence of viral gene expression, it was found that only circular genomes persisted in cells. These results suggest that circularization of the HSV genome may not occur early in the productive phase of wild-type HSV infection, but rather during establishment of a quiescent state or latency, providing a possible strategy for long-term persistence. Additionally, the circularization and possible fate of HSV genomes are regulated by an activity of ICP0.
    Type of Medium: Online Resource
    ISSN: 0027-8424 , 1091-6490
    RVK:
    RVK:
    Language: English
    Publisher: Proceedings of the National Academy of Sciences
    Publication Date: 2003
    detail.hit.zdb_id: 209104-5
    detail.hit.zdb_id: 1461794-8
    SSG: 11
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    Proceedings of the National Academy of Sciences ; 2019
    In:  Proceedings of the National Academy of Sciences Vol. 116, No. 9 ( 2019-02-26), p. 3734-3739
    In: Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 116, No. 9 ( 2019-02-26), p. 3734-3739
    Abstract: In herpes simplex virus type 1 (HSV-1) infection, the coupling of genome replication and transcription regulation has been known for many years; however, the underlying mechanism has not been elucidated. We performed a comprehensive transcriptomic assessment and factor-binding analysis for Pol II, TBP, TAF1, and Sp1 to assess the effect genome replication has on viral transcription initiation and elongation. The onset of genome replication resulted in the binding of TBP, TAF1, and Pol II to previously silent late promoters. The viral transcription factor, ICP4, was continuously needed in addition to DNA replication for activation of late gene transcription initiation. Furthermore, late promoters contain a motif that closely matches the consensus initiator element (Inr), which robustly bound TAF1 postreplication. Continued DNA replication resulted in reduced binding of Sp1, TBP, and Pol II to early promoters. Therefore, the initiation of early gene transcription is attenuated following DNA replication. Herein, we propose a model for how viral DNA replication results in the differential utilization of cellular factors that function in transcription initiation, leading to the delineation of kinetic class in HSV-productive infection.
    Type of Medium: Online Resource
    ISSN: 0027-8424 , 1091-6490
    RVK:
    RVK:
    Language: English
    Publisher: Proceedings of the National Academy of Sciences
    Publication Date: 2019
    detail.hit.zdb_id: 209104-5
    detail.hit.zdb_id: 1461794-8
    SSG: 11
    SSG: 12
    Location Call Number Limitation Availability
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  • 5
    Online Resource
    Online Resource
    Proceedings of the National Academy of Sciences ; 2012
    In:  Proceedings of the National Academy of Sciences Vol. 109, No. 44 ( 2012-10-30)
    In: Proceedings of the National Academy of Sciences, Proceedings of the National Academy of Sciences, Vol. 109, No. 44 ( 2012-10-30)
    Abstract: Based on our results, we propose the following model for the activation and ICP0-mediated inhibition of the IRF-3 signaling pathway during HSV-1 infection ( Fig. P1 ). In HFFs, HSV-1 infection is sensed initially by IFI16 upon the release of viral DNA into the nucleus. A nuclear-to-cytoplasmic signaling cascade is initiated that activates IRF-3 and induces its accumulation in the nucleus. ICP0 expressed at early times during infection sequesters this nuclear IRF-3 from cellular promoters and blocks IRF-3–responsive gene expression. Moreover, ICP0 targets IFI16 for degradation, inhibiting additional signaling and activation of IRF-3. Our results define a pathway for nuclear innate sensing of HSV DNA by IFI16 in infected HFFs and reveals how a virus can block this nuclear innate response. The importance of the IRF-3 signaling pathway in restricting virus replication is strongly suggested by observations that HSV-1 gene expression inhibits IRF-3 signaling through multiple mechanisms ( 5 ). Expression of the viral immediate-early ICP0 E3 ubiquitin ligase is sufficient to inhibit this pathway ( 2 ), as indicated above; however, the mechanism of its inhibition is, to our knowledge, unknown. We therefore examined the localization of IRF-3 during infection with a virus that expresses ICP0. We observed that ICP0 inhibits signaling at two distinct steps during infection: ( i ) following IRF-3 activation and transport to the nucleus at early times postinfection and ( ii ) by inhibiting the pathway upstream of IRF-3 activation at later stages of infection. This later inhibition was observed concomitantly with the relocalization and subsequent degradation of IFI16 in an ICP0-dependent manner. Either inhibition of the proteasome or infection with an ICP0 E3 ubiquitin ligase-defective mutant prevented the loss of IFI16. The IFI16 DNA sensor is important for sensing HSV-1 infection in human cells ( 3 ). Although initially described as a cytosolic sensor ( 3 ), IFI16 was found to be localized to the nucleus of HFF cells, suggesting that it might be involved in sensing HSV-1 viral DNA. Knockdown of IFI16 or STING by siRNA decreased IFN-β gene expression in response to HSV-1 infection but had no effect on the response to an RNA virus. CRM1-mediated nuclear export by leptomycin B treatment inhibited phosphorylation of the IRF-3 signaling component TBK-1; however, we did not observe export of IFI16 from the nucleus to the cytoplasm during infection, as has been described in Kaposi sarcoma-associated herpesvirus activation of inflammasome and NF-κB signaling ( 4 ). HSV-1 induces an innate immune response in human fibroblasts in the absence of viral gene expression ( 1 ). To investigate the initial activation of the IRF-3 signaling pathway in response to HSV-1, we infected primary human foreskin fibroblasts (HFF) with a replication-defective HSV-1 virus that does not express viral gene products and induces an innate immune response ( 2 ). We observed that inhibition of viral DNA release into the nucleus from incoming capsids by a serine protease inhibitor blocks virus-induced IRF-3–responsive gene expression, suggesting that viral DNA is sensed upon accumulation in the nucleus. Sensing of microbial infection by the innate immune system is well documented at many cellular sites, including at the cell surface, in the cytosol, and in intracellular vesicles, but there is limited evidence of nuclear innate signaling. Innate sensing is mediated by binding of microbial macromolecules to host cell receptors, which trigger signaling pathways that lead to the expression of proinflammatory cytokines and interferons. Because of the similarities between viral and cellular DNA, innate sensing of DNA viruses is thought to be excluded from the nuclear compartment. However, herpesviruses replicate mainly in the nucleus of infected cells, and their DNA is a potent activator of the IFN regulatory factor-3 (IRF-3) signaling pathway, suggesting that these viruses may be sensed in the nucleus during infection. Using HSV-1 infection of normal human fibroblasts as a model system for the activation of IRF-3 signaling, we found that HSV DNA is sensed by the nuclear IFN inducible protein 16 (IFI16) DNA sensor, which is necessary to induce an innate immune response to HSV-1. Moreover, viral-encoded infected cell protein 0 (ICP0) counteracts this response by inhibiting IRF-3 in the nucleus, preventing its activity as a transcription factor, and targets IFI16 for proteasomal degradation.
    Type of Medium: Online Resource
    ISSN: 0027-8424 , 1091-6490
    RVK:
    RVK:
    Language: English
    Publisher: Proceedings of the National Academy of Sciences
    Publication Date: 2012
    detail.hit.zdb_id: 209104-5
    detail.hit.zdb_id: 1461794-8
    SSG: 11
    SSG: 12
    Location Call Number Limitation Availability
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  • 6
    Online Resource
    Online Resource
    Informa UK Limited ; 1996
    In:  Molecular and Cellular Biology Vol. 16, No. 6 ( 1996-06-01), p. 3085-3093
    In: Molecular and Cellular Biology, Informa UK Limited, Vol. 16, No. 6 ( 1996-06-01), p. 3085-3093
    Type of Medium: Online Resource
    ISSN: 1098-5549
    Language: English
    Publisher: Informa UK Limited
    Publication Date: 1996
    detail.hit.zdb_id: 1474919-1
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  • 7
    Online Resource
    Online Resource
    Informa UK Limited ; 1995
    In:  Molecular and Cellular Biology Vol. 15, No. 7 ( 1995-07-01), p. 3618-3626
    In: Molecular and Cellular Biology, Informa UK Limited, Vol. 15, No. 7 ( 1995-07-01), p. 3618-3626
    Type of Medium: Online Resource
    ISSN: 1098-5549
    Language: English
    Publisher: Informa UK Limited
    Publication Date: 1995
    detail.hit.zdb_id: 1474919-1
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