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  • Online Resource  (5)
  • Chu, Ka Hou  (5)
  • Shen, Xin  (5)
  • Biodiversity Research  (5)
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  • Online Resource  (5)
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  • Biodiversity Research  (5)
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  • 1
    Online Resource
    Online Resource
    Elsevier BV ; 2014
    In:  Comparative Biochemistry and Physiology Part D: Genomics and Proteomics Vol. 12 ( 2014-12), p. 1-9
    In: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, Elsevier BV, Vol. 12 ( 2014-12), p. 1-9
    Type of Medium: Online Resource
    ISSN: 1744-117X
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2014
    detail.hit.zdb_id: 2224862-6
    SSG: 12
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  • 2
    In: Zoologica Scripta, Wiley, Vol. 46, No. 6 ( 2017-11), p. 729-739
    Abstract: The acorn barnacles (Cirripedia, Thoracica, Balanomorpha) are a diverse group of crustaceans found in virtually all marine and estuarine habitats. Barnacles are important model species in various biological researches, including evolution, intertidal ecology, larval biology and antifouling. However, there remains a lack of a thorough understanding of the phylogeny for this group of animals, particularly at higher taxonomic levels. In this study, we attempt to determine the phylogenetic relationships among balanomorphan families based on analysis of complete mitochondrial genome from various barnacle families and investigate the evolution of mitogenome in barnacles. Whole mitogenomes of six barnacles were newly sequenced, including Acasta sulcata (Archaeobalanidae), Armatobalanus allium (Archaeobalanidae), Chelonibia testudinaria (Chelonibiidae), Octomeris sp. (Chthamalidae), Savignium biporata (Pyrgomatidae) and Tetraclitella divisa (Tetraclitidae), which exhibit five different gene arrangements. Phylogenetic analysis on 15 complete mitochondrial genome sequences from major barnacle families supported Chthamalidae, Pyrgomatidae and Tetraclitidae formed monophyletic units, but suggested polyphyly of both Archaeobalanidae and Balanidae. Chthamalidae was the earliest diverged lineage in Balanomorpha. Chelonibiidae + Tetraclitidae formed the sister taxon to the monophyletic superfamily Balanoidea (Archaeobalanidae + Balanidae + Pyrgomatidae). The members of Archaeobalanidae and Balanidae intermingled in the inferred topology with the monophyletic Pyrgomatidae deeply nested within. Two Megabalanus species from the family Balanidae and A. sulcata from the family Archaeobalanidae share the same six‐gene‐cluster inversion as compared to the other ten balanomorphan barnacles, providing further evidence for the non‐monophyly for the two families. We showed here that the informativeness of the complete mitogenome sequence and rare genomic events in resolving various questions concerning Balanomorpha relationships. The non‐monophyletic status of Archaeobalanidae and Balanidae falsified many previous hypotheses concerning the complex evolution of Balanomorpha and call for further investigations and careful revision on the taxonomy of the group. Future study focusing on the enigmatic and tentatively basal lineages, for example, Chionelasmatoidea Pachylasmatoidea and Catophragmidae, would be most helpful in fully resolving the phylogeny and mitogenome evolutionary history of acorn barnacles.
    Type of Medium: Online Resource
    ISSN: 0300-3256 , 1463-6409
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2017
    detail.hit.zdb_id: 2022109-5
    detail.hit.zdb_id: 121103-1
    SSG: 12
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  • 3
    In: Marine and Freshwater Research, CSIRO Publishing, Vol. 67, No. 8 ( 2016), p. 1241-
    Abstract: The bryozoan Bugula neritina Linnaeus, 1758, is known to be a complex of three cryptic species, namely Types S, D and N. In the present study, we determined the mitochondrial genomic features of B. neritina sampled from Qingdao (QD), China, and compared them with those of the genome reported for a specimen sampled from Taean Gun (TG), South Korea. The B. neritina QD mitochondrial genome has a duplication of trnL2 and lacks trnV compared with B. neritina TG. Five tRNAs (trnL1, trnA, trnE, trnY and trnV) are encoded on the light-strand of B. neritina TG mitochondrial genome, but only one tRNA (trnA) is identified on the B. neritina QD mitochondrial light strand. In contrast to the B. neritina TG mitochondrial genome, deletion of trnV and duplication of trnL2 are identified in the B. neritina QD mtDNA, and three tRNAs (trnE, trnL1 and trnY) exhibit translocation and inversion. The genetic distance in 12 protein-coding genes (PCGs) (amino acids) between the two B. neritina was 0.079, which is higher than interspecific values of 10 lophotrochozoan genera selected for comparison. All these results from comparison between the two B. neritina clearly indicate that they are genetically distinct species. Phylogenetic analysis based on cox1 and lrRNA sequences suggested that B. neritina TG belongs to the widely distributed Type S and B. neritina QD represents a new cryptic type closely related to Type N. This new type is designated as Type Y, for its occurrence in the Yellow Sea. The geographical range of the different types of B. neritina awaits further studies.
    Type of Medium: Online Resource
    ISSN: 1323-1650
    Language: English
    Publisher: CSIRO Publishing
    Publication Date: 2016
    detail.hit.zdb_id: 1283028-8
    SSG: 12
    SSG: 21,3
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  • 4
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2019
    In:  Marine Biodiversity Vol. 49, No. 5 ( 2019-10), p. 2311-2322
    In: Marine Biodiversity, Springer Science and Business Media LLC, Vol. 49, No. 5 ( 2019-10), p. 2311-2322
    Type of Medium: Online Resource
    ISSN: 1867-1616 , 1867-1624
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2019
    detail.hit.zdb_id: 2478073-X
    detail.hit.zdb_id: 2493558-X
    SSG: 12
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  • 5
    In: Zoologica Scripta, Wiley, Vol. 45, No. 2 ( 2016-03), p. 187-199
    Abstract: The phylum Chaetognatha (arrow worms) comprises a group of small marine predators that constitute a critical component of the zooplankton community throughout the world's oceans. Various phylogenetic affiliations have been proposed for the Chaetognatha, for which there are at least nine possible phylogenetic positions. Resolving the phylogenetic position of the chaetognaths is a key in understanding the fundamental developmental features of bilaterians. In comparison with the typical gene content of metazoan mitogenomes, two protein‐coding genes ( atp6 and atp8 ) are absent from all chaetognaths. The two mitogenomes sequenced from Sagitta crassa and Zonosagitta nagae in this study nevertheless contain two and four tRNA genes, respectively, in contrast to those of the other five chaetognaths reported where only one tRNA gene ( trnMet ) is present, thus invalidating the view that all chaetognath mitogenomes have a single tRNA gene. A conserved major gene order shared by all chaetognaths could be partially identified in many protostome mitogenomes, but not in any ancestral mitogenome gene arrangement of the four deuterostome groups. Phylogenetic analysis of the deduced amino acid sequences of protein‐coding genes from 85 mitogenomes of 19 groups suggests the Chaetognatha to be a sister group to the protostomes, a result consistent with evidences from the developmental pattern and other molecular analyses.
    Type of Medium: Online Resource
    ISSN: 0300-3256 , 1463-6409
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2016
    detail.hit.zdb_id: 2022109-5
    detail.hit.zdb_id: 121103-1
    SSG: 12
    Location Call Number Limitation Availability
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