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  • Course of study: MSc Biological Oceanography  (13)
  • taxonomy  (9)
  • 1
    Publication Date: 2024-04-12
    Description: This paper presents a use-case conducted within the ENVRI FAIR project, examining challenges and opportunities in deploying FAIR-aligned (ensuring Findability, Accessibility, Interoperability and Reusability) scientific name-matching services across Environmental Research Infrastructures (RIs). Six services were tested using various name variations, revealing inconsistencies in match types, status reporting and handling of canonical forms and typos. These diversities pose challenges for RI data pipelines and interoperability. The paper underscores the importance of standardised tools, enhanced communication, training, collaboration and shared resources. Addressing these needs can facilitate more effective FAIR implementation within the ENVRI community and biodiversity research. This, in turn, will empower RIs to seamlessly integrate and leverage scientific names, unlocking the full potential of their data for research and policy implementation.
    Keywords: scientific names ; taxonomy ; biodiversity ; FAIR ; ENVRI
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 2
    Publication Date: 2024-01-12
    Description: Three species of Mycosphaerella, namely M. eumusae, M. fijiensis, and M. musicola are involved in the Sigatoka disease complex of bananas. Besides these three primary pathogens, several additional species of Mycosphaerella or their anamorphs have been described from Musa. However, very little is known about these taxa, and for the majority of these species no culture or DNA is available for study. In the present study, we collected a global set of Mycosphaerella strains from banana, and compared them by means of morphology and a multi-gene nucleotide sequence data set. The phylogeny inferred from the ITS region and the combined data set containing partial gene sequences of the actin gene, the small subunit mitochondrial ribosomal DNA and the histone H3 gene revealed a rich diversity of Mycosphaerella species on Musa. Integration of morphological and molecular data sets confirmed more than 20 species of Mycosphaerella (incl. anamorphs) to occur on banana. This study reconfirmed the previously described presence of Cercospora apii, M. citri and M. thailandica, and also identified Mycosphaerella communis, M. lateralis and Passalora loranthi on this host. Moreover, eight new species identified from Musa are described, namely Dissoconium musae, Mycosphaerella mozambica, Pseudocercospora assamensis, P. indonesiana, P. longispora, Stenella musae, S. musicola, and S. queenslandica.
    Keywords: Mycosphaerella ; phylogeny ; Sigatoka disease complex ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 3
    Publication Date: 2024-01-12
    Description: New data on 52 non-indigenous mollusks in the Eastern Mediterranean Sea is reported. Fossarus sp. (aff. aptus sensu Blatterer 2019), Coriophora lessepsiana Albano, Bakker & Sabelli, sp. nov., Cerithiopsis sp. aff. pulvis, Joculator problematicus Albano & Steger, sp. nov., Cerithiopsis sp., Elachisina sp., Iravadia aff. elongata, Vitrinella aff. Vitrinella sp. 1 (sensu Blatterer 2019), Melanella orientalis, Parvioris aff. dilecta, Odostomia cf. dalli, Oscilla virginiae, Parthenina cossmanni, Parthenina typica, Pyrgulina craticulata, Turbonilla funiculata, Cylichna collyra, Musculus coenobitus, Musculus aff. viridulus, Chavania erythraea, Scintilla cf. violescens, Iacra seychellarum and Corbula erythraeensis are new records for the Mediterranean. An unidentified gastropod, Skeneidae indet., Triphora sp., Hypermastus sp., Sticteulima sp., Vitreolina cf. philippi, Odostomia (s.l.) sp. 1, Henrya (?) sp., and Semelidae sp. are further potential new non-indigenous species although their status should be confirmed upon final taxonomic assessment. Additionally, the status of Dikoleps micalii, Hemiliostraca clandestina comb. nov. and H. athenamariae comb. nov. is changed to non-indigenous, range extensions for nine species and the occurrence of living individuals for species previously recorded from empty shells only are reported. Opimaphora blattereri Albano, Bakker & Sabelli, sp. nov. is described from the Red Sea for comparison with the morphologically similar C. lessepsiana Albano, Bakker & Sabelli, sp. nov. The taxonomic part is followed by a discussion on how intensive fieldwork and cooperation among institutions and individuals enabled such a massive report, and how the poor taxonomic knowledge of the Indo-Pacific fauna hampers non-indigenous species detection and identification. Finally, the hypothesis that the simultaneous analysis of quantitative benthic death assemblages can support the assignment of non-indigenous status to taxonomically undetermined species is discussed.
    Keywords: Animal Science and Zoology ; Ecology ; Evolution ; Behavior and Systematics ; Cerithiopsidae ; invasion biology ; Lessepsian invasion ; Mollusca ; new species ; Red Sea ; taxonomy ; Triphoridae
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 4
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 54 no. 1/3, pp. 77-93
    Publication Date: 2024-01-12
    Description: The number of Rafflesia species (Rafflesiaceae) reported for the Philippines has grown explosively from two before 2002 to ten or eleven presently. We present an overview of the current knowledge of Philippine Rafflesia by providing a comprehensive account of all the recognized species with their taxonomy, distribution and ecology, plus a key and photographs to aid in identification. Their conservation status and that of the rain forest habitats they require is discussed.
    Keywords: Conservation ; ecology ; Philippines ; Rafflesia ; Rafflesiaceae ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 5
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    In:  (Master thesis), Christian-Albrechts-Universität Kiel, Kiel, Germany, 53 pp
    Publication Date: 2017-12-04
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
    Format: text
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  • 6
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    In:  (PhD/ Doctoral thesis), Christian-Albrechts-Universität Kiel, Kiel, Germany, 107 pp
    Publication Date: 2019-03-21
    Description: Originating from East Asia, the perennial red macroalga Gracilaria vermiculophylla (Ohmi) Papenfuss has successfully invaded several temperate areas of the Northern hemisphere and continues to spread. In its new range, the seaweed tends to form local mass appearances and to dominate the native community. A high tolerance towards both abiotic and biotic environmental stressors could explain the invasion success of this species. I therefore compared the stress resistance of G. vermiculophylla from six native populations from South Korea and China and eight invasive populations from Europe and NW-Mexico. In short-term experiments G. vermiculophylla individuals were exposed to 1) heat shock, 2) UV-C-radiation and 3) elevated copper concentrations in the water. In a long-term experiment the seaweed had to cope with depletion stress (darkness in combination with low temperature and dryness) for several months. All experiments were carried out twice - one time in the native range in Qingdao, China and one time in the invaded range in Kiel, Germany - to rule out local acclimation effects. In order to compare the resistance against herbivory individuals of native and invasive G. vermiculophylla populations were fed to snails from the native (Littorina brevicula) and the invasive (Littorina littorea) range. In the Baltic Sea, G. vermiculophylla might threaten the habitat-forming native brown alga Fucus vesiculosus through direct competition for resources and by providing a shelter for mesograzers, which prefer to feed on F. vesiculosus. Mesocosm-experiments were conducted over one year in the Kiel Fjord in order to test the direct and indirect effects of G. vermiculophylla on F. vesiculosus.
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
    Format: text
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  • 7
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    In:  (Master thesis), Christian-Albrechts-Universität, Kiel, Germany, 62 pp
    Publication Date: 2014-01-15
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
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  • 8
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    In:  (Master thesis), Christian-Albrechts-Universität Kiel, Kiel, Germany, X, 130 pp
    Publication Date: 2013-11-19
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
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  • 9
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    In:  (Master thesis), Christian-Albrechts-Universität Kiel, Kiel, Germany, 61 pp
    Publication Date: 2019-09-23
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
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  • 10
    Publication Date: 2023-06-14
    Keywords: Course of study: MSc Biological Oceanography
    Type: Thesis , NonPeerReviewed
    Format: text
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