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  • 1
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    Global consortium for the classification of fungi and fungus-like taxa (2023)
    Mushroom Research Foundation
    In:  Mycosphere vol. 14 no. 1, pp. 1960-2012
    Details
    Publication Date: 2024-04-22
    Description: The Global Consortium for the Classification of Fungi and fungus-like taxa is an international initiative of more than 550 mycologists to develop an electronic structure for the classification of these organisms. The members of the Consortium originate from 55 countries/regions worldwide, from a wide range of disciplines, and include senior, mid-career and early-career mycologists and plant pathologists. The Consortium will publish a biannual update of the Outline of Fungi and funguslike taxa, to act as an international scheme for other scientists. Notes on all newly published taxa at or above the level of species will be prepared and published online on the Outline of Fungi website (https://www.outlineoffungi.org/), and these will be finally published in the biannual edition of the Outline of Fungi and fungus-like taxa. Comments on recent important taxonomic opinions on controversial topics will be included in the biannual outline. For example, ‘to promote a more stable taxonomy in Fusarium given the divergences over its generic delimitation’, or ‘are there too many genera in the Boletales?’ and even more importantly, ‘what should be done with the tremendously diverse ‘dark fungal taxa?’ There are undeniable differences in mycologists’ perceptions and opinions regarding species classification as well as the establishment of new species. Given the pluralistic nature of fungal taxonomy and its implications for species concepts and the nature of species, this consortium aims to provide a platform to better refine and stabilise fungal classification, taking into consideration views from different parties. In the future, a confidential voting system will be set up to gauge the opinions of all mycologists in the Consortium on important topics. The results of such surveys will be presented to the International Commission on the Taxonomy of Fungi (ICTF) and the Nomenclature Committee for Fungi (NCF) with opinions and percentages of votes for and against. Criticisms based on scientific evidence with regards to nomenclature, classifications, and taxonomic concepts will be welcomed, and any recommendations on specific taxonomic issues will also be encouraged; however, we will encourage professionally and ethically responsible criticisms of others’ work. This biannual ongoing project will provide an outlet for advances in various topics of fungal classification, nomenclature, and taxonomic concepts and lead to a community-agreed classification scheme for the fungi and fungus-like taxa. Interested parties should contact the lead author if they would like to be involved in future outlines.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 2
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    Multiple gene genealogies and phenotypic characters differentiate several novel species of Mycosphaerella and related anamorphs\non banana (2008)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 20 no. 1, pp. 19-37
    Details
    Publication Date: 2024-01-12
    Description: Three species of Mycosphaerella, namely M. eumusae, M. fijiensis, and M. musicola are involved in the Sigatoka disease complex of bananas. Besides these three primary pathogens, several additional species of Mycosphaerella or their anamorphs have been described from Musa. However, very little is known about these taxa, and for the majority of these species no culture or DNA is available for study. In the present study, we collected a global set of Mycosphaerella strains from banana, and compared them by means of morphology and a multi-gene nucleotide sequence data set. The phylogeny inferred from the ITS region and the combined data set containing partial gene sequences of the actin gene, the small subunit mitochondrial ribosomal DNA and the histone H3 gene revealed a rich diversity of Mycosphaerella species on Musa. Integration of morphological and molecular data sets confirmed more than 20 species of Mycosphaerella (incl. anamorphs) to occur on banana. This study reconfirmed the previously described presence of Cercospora apii, M. citri and M. thailandica, and also identified Mycosphaerella communis, M. lateralis and Passalora loranthi on this host. Moreover, eight new species identified from Musa are described, namely Dissoconium musae, Mycosphaerella mozambica, Pseudocercospora assamensis, P. indonesiana, P. longispora, Stenella musae, S. musicola, and S. queenslandica.
    Keywords: Mycosphaerella ; phylogeny ; Sigatoka disease complex ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 3
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    Towards a single and innovative European transport system : international assessment and action plans of the focus areas ; final report (2017)
    Luxembourg : Publications Office of the Europ. Union
    Details
    Publication Date: 2018-11-21
    Description: The study "Towards a Single and Innovative European Transport System" is developing action plans for the establishment of an integrated transport system in Europe. This report was created in a joint effort between VDI/VDE Innovation + Technik GmbH (Germany), Wuppertal Institute for Climate, Environment and Energy (Germany) and the Centre of Research and Technology Hellas, CERTH (Greece) on behalf of the European Commission's DG MOVE. Focus of the report is the international assessment of six different countries - Brazil, China, India, Japan, South Korea, USA - in five focus areas across all transportation modes. It provides actions plans on how to overcome existing European barriers towards a single and innovative European Transport System based on best practices and lessons learned in the countries under study. In addition to the actions plans, the study also provides recommendations for international collaboration.
    Keywords: ddc:380
    Repository Name: Wuppertal Institut für Klima, Umwelt, Energie
    Language: English
    Type: report , doc-type:report
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  • 4
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    Numerous new records of tropical non-indigenous species in the Eastern Mediterranean highlight the challenges of their recognition and identification (2021)
    Pensoft Publishers
    In:  ZooKeys vol. 1010, pp. 1-95
    Details
    Publication Date: 2024-01-12
    Description: New data on 52 non-indigenous mollusks in the Eastern Mediterranean Sea is reported. Fossarus sp. (aff. aptus sensu Blatterer 2019), Coriophora lessepsiana Albano, Bakker & Sabelli, sp. nov., Cerithiopsis sp. aff. pulvis, Joculator problematicus Albano & Steger, sp. nov., Cerithiopsis sp., Elachisina sp., Iravadia aff. elongata, Vitrinella aff. Vitrinella sp. 1 (sensu Blatterer 2019), Melanella orientalis, Parvioris aff. dilecta, Odostomia cf. dalli, Oscilla virginiae, Parthenina cossmanni, Parthenina typica, Pyrgulina craticulata, Turbonilla funiculata, Cylichna collyra, Musculus coenobitus, Musculus aff. viridulus, Chavania erythraea, Scintilla cf. violescens, Iacra seychellarum and Corbula erythraeensis are new records for the Mediterranean. An unidentified gastropod, Skeneidae indet., Triphora sp., Hypermastus sp., Sticteulima sp., Vitreolina cf. philippi, Odostomia (s.l.) sp. 1, Henrya (?) sp., and Semelidae sp. are further potential new non-indigenous species although their status should be confirmed upon final taxonomic assessment. Additionally, the status of Dikoleps micalii, Hemiliostraca clandestina comb. nov. and H. athenamariae comb. nov. is changed to non-indigenous, range extensions for nine species and the occurrence of living individuals for species previously recorded from empty shells only are reported. Opimaphora blattereri Albano, Bakker & Sabelli, sp. nov. is described from the Red Sea for comparison with the morphologically similar C. lessepsiana Albano, Bakker & Sabelli, sp. nov. The taxonomic part is followed by a discussion on how intensive fieldwork and cooperation among institutions and individuals enabled such a massive report, and how the poor taxonomic knowledge of the Indo-Pacific fauna hampers non-indigenous species detection and identification. Finally, the hypothesis that the simultaneous analysis of quantitative benthic death assemblages can support the assignment of non-indigenous status to taxonomically undetermined species is discussed.
    Keywords: Animal Science and Zoology ; Ecology ; Evolution ; Behavior and Systematics ; Cerithiopsidae ; invasion biology ; Lessepsian invasion ; Mollusca ; new species ; Red Sea ; taxonomy ; Triphoridae
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
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    East Africa's policy and stakeholder integration of informal operators in electric mobility transitions : Kigali, Nairobi, Kisumu and Dar es Salaam (2021)
    Details
    Publication Date: 2021-05-06
    Description: Electric mobility is beginning to enter East African cities. This paper aims to investigate what policy-level solutions and stakeholder constellations are established in the context of electric mobility (e-mobility) in Dar es Salaam, Kigali, Kisumu and Nairobi and in which ways they attempt to tackle the implementation of electric mobility solutions. The study employs two key methods including content analysis of policy and programmatic documents and interviews based on a purposive sampling approach with stakeholders involved in mobility transitions. The study findings point out that in spite of the growing number of policies (specifically in Rwanda and Kenya) and on-the-ground developments, a set of financial and technical barriers persists. These include high upfront investment costs in vehicles and infrastructure, as well as perceived lack of competitiveness with fossil fuel vehicles that constrain the uptake of e-mobility initiatives. The study further indicates that transport operators and their representative associations are less recognized as major players in the transition, far behind new e-mobility players (start-ups) and public authorities. This study concludes by identifying current gaps that need to be tackled by policymakers and stakeholders in order to implement inclusive electric mobility in East African cities, considering modalities that include transport providers and address their financial constraints.
    Keywords: ddc:380
    Repository Name: Wuppertal Institut für Klima, Umwelt, Energie
    Language: English
    Type: article , doc-type:article
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  • 6
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    Motorcycle taxis in transition? : Review of digitalization and electrification trends in selected East African capital cities (2023)
    Details
    Publication Date: 2023-08-14
    Description: The number of motorcycle taxis has soared in East African cities over the last decades, filling a gap in mobility needs while providing revenue opportunities to drivers. However, poor road safety combined with contribution to carbon emissions and air pollution creates a sustainability conundrum, which has led governments to control or repress the mode, yet without much success. After reviewing the characteristics and regulation of motorcycle taxis in Nairobi, Kigali, and Kampala, this study investigates the existence and impacts of two recent trends: digitalization and electrification. A comprehensive approach is adopted with a systematic review of the literature and policies, completed by field research and key informant interviews. We find out that electrification is mostly associated with positive impacts covering a spectrum of environment, economics, health, and social-related benefits, while the benefits of digitalization are more uncertain or contested. Impacts are however limited for both at the time of study as digitalization is highly volatile and electrification nascent. In conclusion, the paper identifies an interlinkage between the trends via the example of data, and further key research needs.
    Keywords: ddc:380
    Repository Name: Wuppertal Institut für Klima, Umwelt, Energie
    Language: English
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  • 7
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    Re-evaluation of Phytophthora citricola isolates from multiple woody hosts in Europe and North America reveals a new species, Phytophthora plurivora sp. nov (2009)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 22 no. 1, pp. 95-110
    Details
    Publication Date: 2024-01-12
    Description: During large-scale surveys for soilborne Phytophthora species in forests and semi-natural stands and nurseries in Europe during the last decade, homothallic Phytophthora isolates with paragynous antheridia, semipapillate persistent sporangia and a growth optimum around 25 \xc2\xb0C which did not form catenulate hyphal swellings, were recovered from 39 host species in 16 families. Based on their morphological and physiological characters and the similarity of their ITS DNA sequences with P. citricola as designated on GenBank, these isolates were routinely identified as P. citricola. In this study DNA sequence data from the internal transcribed spacer regions (ITS1 and ITS2) and 5.8S gene of the rRNA operon, the mitochondrial cox1 and \xce\xb2-tubulin genes were used in combination with morphological and physiological characteristics to characterise these isolates and compare them to the ex-type and the authentic type isolates of P. citricola, and two other taxa of the P. citricola complex, P. citricola I and the recently described P. multivora. Due to their unique combination of morphological, physiological and molecular characters these semipapillate homothallic isolates are described here as a new species, P. plurivora sp. nov.
    Keywords: Beech ; citricola ; decline ; dieback ; forest ; multivora ; nursery ; oak ; phylogeny
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 8
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    Eight new Halophytophthora species from marine and brackish-water ecosystems in Portugal and an updated phylogeny for the genus (2022)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 48, pp. 54-90
    Details
    Publication Date: 2024-03-24
    Description: During an oomycete survey in December 2015, 10 previously unknown Halophytophthora taxa were isolated from marine and brackish water of tidal ponds and channels in saltmarshes, lagoon ecosystems and river estuaries at seven sites along the Algarve coast in the South of Portugal. Phylogenetic analyses of LSU and ITS datasets, comprising all described Halophytophthora species, the 10 new Halophytophthora taxa and all relevant and distinctive sequences available from GenBank, provided an updated phylogeny of the genus Halophytophthora s.str. showing for the first time a structure of 10 clades designated as Clades 1–10. Nine of the 10 new Halophytophthora taxa resided in Clade 6 together with H. polymorphica and H. vesicula. Based on differences in morphology and temperature-growth relations and a multigene (LSU, ITS, Btub, hsp90, rpl10, tigA, cox1, nadh1, rps10) phylogeny, eight new Halophytophthora taxa from Portugal are described here as H. brevisporangia, H. celeris, H. frigida, H. lateralis, H. lusitanica, H. macrosporangia, H. sinuata and H. thermoambigua. Three species, H. frigida, H. macrosporangia and H. sinuata, have a homothallic breeding system while the remaining five species are sterile. Pathogenicity and litter decomposition tests are underway to clarify their pathological and ecological role in the marine and brackish-water ecosystems. More oomycete surveys in yet undersurveyed regions of the world and population genetic or phylogenomic analyses of global populations are needed to clarify the origin of the new Halophytophthora species.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; breeding system ; ecological role ; evolution ; lifestyle ; oomycetes ; Peronosporaceae ; Phytophthora
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 9
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    Transport in developing countries and climate policy : suggestions for a Copenhagen agreement and beyond (2009)
    Wuppertal : Wuppertal Institut für Klima, Umwelt, Energie | Wuppertal : Wuppertal Institut für Klima, Umwelt, Energie
    Details
    Publication Date: 2022-02-18
    Description: Also in the global South, transport already significantly contributes to climate change and has high growth rates. Further rapid motorisation of countries in Asia and Latin America could counteract any climate efforts and aggravate problems of noxious emissions, noise and congestion. This Paper aims at connecting the need for transport actions in developing countries to the international negotiations on a post-2012 climate change agreement. It outlines the decisions to be taken in Copenhagen and the preparations to adequately implement these decisions from 2013. Arguing, that a sustainable transport approach needs to set up comprehensive policy packages, the paper assesses the substance of current climate negotiations against the fit to sustainable transport. It concludes that the transport sector's importance should be highlighted and a significant contribution to mitigation efforts required. Combining the two perspectives lead to several concrete suggestions: Existing elements of the carbon market should be improved (e.g. discounting), but an upscale of the carbon market would not be an appropriate solution. Due to a lack of additionality, offsetting industrialised countries' targets would finally undermine the overall success of the climate agreement. Instead, a mitigation fund should be established under the UNFCCC and financed by industrialised countries. This fund should explicitly enable developing countries to implement national sustainable development transport and mobility policies as well as local projects. While industrialized countries would set up target achievement plans, developing countries should outline low carbon development strategies, including a section on transport policy.
    Keywords: ddc:380
    Repository Name: Wuppertal Institut für Klima, Umwelt, Energie
    Language: English
    Type: workingpaper , doc-type:workingPaper
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  • 10
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    Vertebral number is highly evolvable in salamanders and newts (family Salamandridae) and variably associated with climatic parameters (2015)
    In:  Contributions to Zoology vol. 84 no. 2, pp. 85-113
    Details
    Publication Date: 2024-01-12
    Description: In vertebrates, the relative proportion of the number of trunk and caudal vertebrae is an important determinant of body shape. While among amphibians frogs and toads show low variation in vertebrae numbers, in salamanders the numbers of trunk and caudal vertebrae vary widely, giving rise to phenotypes in the range from short-bodied and long-tailed to long-bodied and short-tailed. We analysed vertebral numbers in the family Salamandridae in a phylogenetic context and calculated the relationship between vertebral changes and changes in climate and other environmental parameters. A significant association was found between morphological change with precipitation and temperature. However, annual precipitation affected the two main groups of salamandrid salamanders differently, with trunk elongation in the terrestrial \xe2\x80\x98true salamanders\xe2\x80\x99 and tail elongation in the more aquatic \xe2\x80\x98newts\xe2\x80\x99. A - male biased - sexual dimorphism was only observed in Lissotriton vulgaris vulgaris in the number of trunk vertebrae and in Ommatotriton ophryticus and Lissotriton species for the number of caudal vertebrae. Our data indicated that the number of trunk and caudal vertebrae are highly evolvable traits with frequent evolutionary reversals. In some groups (e.g. Cynops, Lyciasalamandra, Neurergus and the Laotriton-Pachytriton-Paramesotriton clade) the number of trunk vertebrae is stable, while in many groups it is subject to change (e.g. Tylototriton). This latter, species-rich genus appears to be an excellent group to further test effects of the environment on body shape.
    Keywords: ancestral character states ; body shape ; climatic niche ; comparative method ; phylogeny ; vertebral column
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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