Description: Unlike many temperate marine species that alter spatial or depth distributions in response to environmental change, tilefish ( Lopholatilus chamaeleonticeps ) has such specific habitat requirements that off the coast of New England, USA, it is restricted to the normally warm-water, upper continental shelf slope, where it excavates and occupies burrows. In 1882, tens of millions of adult tilefish died suddenly following the intrusion of lethally cold Subarctic water into the tilefish habitat. Here we show that the same climate driver implicated in the 1882 event (the North Atlantic Oscillation: NAO) has also affected commercial tilefish landings throughout most of the 20th century by altering slope water temperatures and likely the tilefish's reproductive success. We also show that this temperature–landings relationship broke down in the 1970s coincident with dramatically increased exploitation. Reconstructions of decadal to millennial scale variations in slope water temperatures explain why no mass mortality occurred following the 2010 negative NAO anomaly, despite being similar in magnitude to the NAO anomaly that preceded the 1882 event.

Description: Characterizing the space–time variability in spatial distributions as well as understanding its drivers is basic to designing robust spatial management plans. As a prerequisite, we analyse here how this variability relates to population dynamics in conjunction with environmental conditions. For that, spatio-temporal statistical approaches are needed but seldom used in fisheries science. To fill this gap, we showcase the usefulness of the method of empirical orthogonal functions (EOFs). Guidelines are given to apply the method on a series of gridded maps as derived from fisheries survey dataseries that now span over decades. The method is applied to the series, 2000–2012, of the spatial distributions of European anchovy in the Bay of Biscay at spawning time. Across the series, the EOF decomposition allowed to identify three main types of spatial distributions. One type corresponded to an extended distribution, another to a restricted distribution in core areas, and the third to a very coastal distribution. The coastal spawning distribution corresponded to a low population growth rate as it was never followed by a large recruitment in the subsequent year. We did not attempt to explain the spatial patterns per se but the drivers of change from one type of distribution to another. Stock size and fish size as well as bottom temperature and water column stratification were the covariates that controlled the variability in the spatial distributions over time. Further, the spatial distribution at spawning time related to recruitment in the following year, meaning that variability in the spatial distribution of spawning affected population dynamics. The typology of maps based on EOF decomposition summarized this spatial variability into spatial spawning configurations, which may serve spatial planning.

Description: Lumpfish, or lumpsucker, Cyclopterus lumpus (Linnaeus, 1758) is widely distributed in the North Atlantic Ocean. It has a considerable economic value and substantial fisheries occur in several North Atlantic regions owing to the use of its fully ripe internal egg masses in the ovaries as an alternative to sturgeon caviar. Despite being intensively fished in several locations, biological knowledge is limited and no genetic structure information is available. In this study, the stock structure of C. lumpus was investigated across the North Atlantic using ten microsatellite loci. Out of ten loci, two exhibited higher level of differentiation but their inclusion/exclusion from the analyses did not drastically change the observed genetic pattern. A total of three distinct genetic groups were detected: Maine–Canada–Greenland, Iceland–Norway and Baltic Sea. These results, discussed in terms of origin of differentiation, gene flow, and selection, showed that gene flow was rather limited among the detected groups, and also between Greenland and Maine–Canada.

Description: Little is known about lumpfish ( Cyclopterus lumpus ) ecology, especially its distribution in the open Barents Sea. This paper describes fluctuations in abundance and biomass indices of lumpfish based on pelagic trawl catches. This long-term monitoring survey has been conducted between August and September since 1980. Investigations show that lumpfish is widely distributed in the pelagic waters of the Barents Sea. Relative biomass and abundance indices were calculated for the period 1980–2012. The mean annual biomass was estimated to be 48 000 t, with a maximum of 143 000 t; the estimated mean annual abundance was 53 million individuals, with a maximum of 132 million individuals. There were more juveniles than adults, with juveniles comprising 40–80% of the total abundance (average 60%). The largest concentrations of both juveniles and adults were in years with warm temperatures. The majority of fish were found in waters of 5–7°C (60% of juveniles) and 4–7°C (70% of adults), indicating a strong association with Atlantic water masses in the Barents Sea. Regulations on the Norwegian and Russian fisheries for prespawning lumpfish are based only on after-the-fact fishery data and, therefore, have been insufficient in preventing negative effects on the lumpfish resource from fishing. Understanding the stock fluctuations and the use of fishery-independent data may improve the precautionary approach to fishery management. The use of lumpfish indices from the scientific surveys in the Barents Sea should be implemented to strengthen the current stock assessment.

Description: The large fish indicator (LFI) was developed to support the North Sea fish community Ecological Quality Objective (EcoQO) pilot study, intended to establish an operational ecosystem approach to management. Subsequently, procedures established in the North Sea were applied to the Celtic Sea to derive an LFI and target specific to this region. The Marine Strategy Framework Directive (MSFD) requires EU Member States sharing marine regions to cooperate using the Regional Seas Conventions, and using indicators already adopted by them. The MSFD explicitly suggests the LFI as a foodweb indicator, but it could equally well be used to monitor biodiversity. Here, we apply the established rationale to develop an LFI and target specific to the southern Bay of Biscay. Despite declining in the 1990s, the LFI subsequently recovered to near original values in 2008. Previously, relationships between the LFI and fishing pressure have involved lengthy time-lags. We observe a similar relationship, but with shorter lag. The nature of the larger species responsible for much of the change in the LFI may explain this difference, and might also suggest that, in the Bay of Biscay, the LFI is more appropriately used as a biodiversity indicator, rather than a foodweb indicator.

Description: Marine organisms that utilize nearshore environments for major components of their life histories are subject to both local-scale forcing such as water quality and estuarine degradation as well as large-scale forcing such as fishing and decadal-scale climate variability. Large-scale forcing has the potential to synchronize the dynamics of subpopulations, while local-level forcing can produce asynchronous subpopulation trends. Summer flounder ( Paralichthys dentatus ) and winter flounder ( Pseudopleuronectes americanus ) are important commercial and recreational flatfish along the east coast of North America which spend their first year of life in coastal habitats. We found that the two exhibited significant within-species coherence in commercial landings and fisheries-independent surveys across the northeast shelf of the United States, suggesting large-scale external drivers. In laboratory studies, temperature has been found to be an important factor regulating survival during the egg, larva and settlement phases of both species. We reconstructed a 40-year time-series of coastal water temperature for the major spawning and nursery areas to examine changes in the thermally available habitat. Estimates of winter flounder abundance were negatively correlated with the winter water temperature, but not with fishing mortality. Summer flounder abundance, by contrast, was negatively correlated with fishing mortality, but exhibited no link with temperature. In addition, time-varying stock–recruitment relationships indicated that stock productivity declined for winter flounder over time, while summer flounder productivity has varied without a trend. While both species declined in the 1980s and early 1990s due to heavy fishing pressure, the reduction in fishing over the last two decades has led to rebuilding of the summer flounder stock and an expansion of its age structure. Declining productivity due to warming estuarine conditions has kept the winter flounder stock at low levels despite low fishing pressure. The two stocks illustrate the importance of controlling fishing mortality in the management of natural marine resources while also accounting for changes in productivity due to climate variability and change.

Description: Understanding the influence of oceanographic features on the structure of fish population is of basic importance to population dynamics studies and fisheries management. The European anchovy ( Engraulis encrasicolus ) exhibits a complex population structure which has produced conflicting results in previous genetic studies. This study examines the variability in the shape of the anchovy's otolith as a tool for identifying different stocks, and investigates the effects of oceanographic features on population structure. Anchovies were analysed from seven locations in the SW Mediterranean Sea and Atlantic Ocean along the northwestern African (Morocco) and Portuguese (Bay of Cadiz) coasts. A combination of otolith shape indices and elliptic Fourier descriptors were investigated by multivariate statistical procedures. Within the studied area, three distinct anchovy stocks were identified: the Algero-Provençal Basin, the southern Alboran Sea, and the Atlantic Ocean (Morocco and Gulf of Cadiz). The separation of the stocks was based on non-parametric discriminant analysis returning a classification percentage. Over 81% of the separation of the stocks could be explained by oceanographic features. Shape variability of anchovy otoliths was associated with the presence of the Almeria-Oran front, and the strait of Gibraltar. The Alboran stock was distinct from the Algero-Provençal Basin and from the closest Atlantic stocks (Gulf of Cadiz or Atlantic coast of Morocco). Results are discussed and compared with those previously obtained by genetic studies. This study supports the efficiency of otolith shape analysis for the stock identification of anchovy, and highlights the role of oceanographic features in stock separation.

Description: Fish and wildlife often exhibit an aggregated distribution pattern, whereas local abundance changes constantly due to movement. Estimating population density or size and survey detectability (i.e. gear efficiency in a fishery) for such elusive species is technically challenging. We extend abundance and detectability (N-mixture) methods to deal with this difficult situation, particularly for application to fish populations where gear efficiency is almost never equal to one. The method involves a mixture of statistical models (negative binomial, Poisson, and binomial functions) at two spatial scales: between-cell and within-cell. The innovation in this approach is to use more than one fishing gear with different efficiencies to simultaneously catch (sample) the same population in each cell at the same time-step. We carried out computer simulations on a range of scenarios and estimated the relevant parameters using a Bayesian technique. We then applied the method to a demersal fish species, tiger flathead, to demonstrate its utility. Simulation results indicated that the models can disentangle the confounding parameters in gear efficiency and abundance, and the accuracy generally increases as sample size increases. A joint negative binomial–Poisson model using multiple gears gives the best fit to tiger flathead catch data, while a single gear yields unrealistic results. This cross-sampling method can evaluate gear efficiency cost effectively using existing fishery catch data or survey data. More importantly, it provides a means for estimating gear efficiency for gear types (e.g. gillnets, traps, hook and line, etc.) that are extremely difficult to study using field experiments.

Description: The English Channel cuttlefish ( Sepia officinalis ) is the most abundant cephalopod resource in the Northeast Atlantic and one of the three most valuable resources for English Channel fishers. Depletion methods and age-structured models have been used to assess the stock, though they have shown limitations related to the model assumptions and data demand. A two-stage biomass model is, therefore, proposed here using, as input data, four abundance indices derived from survey and commercial trawl data collected by Ifremer and Cefas. The model suggests great interannual variability in abundance during the 17 years of the period considered and a decreasing trend in recent years. Model results suggest that recruitment strength is independent of spawning–stock biomass, but appears to be influenced by environmental conditions such as sea surface temperature at the start of the life cycle. Trends in exploitation rate do not reveal evidence of overexploitation. Reference points are proposed and suggestions for management of the sustainable utilization of cuttlefish in the English Channel are advanced.

Description: Blackspot sea bream ( Pagellus bogaraveo ) is the most important economical resource of Azorean fisheries. Juveniles (age 0 and 1) were detected along island coastlines in nursery grounds that sheltered individuals of up to 13 cm (fork length). Juveniles occurred in coastal areas in all seasons, but higher catch per unit efforts occurred during summer. Larger individuals tended to be caught on the shelves and slopes of the islands and seamounts by the demersal, mixed hook, and line fisheries. Juveniles were exclusively found at inshore areas, while spawners were distributed over offshore areas (islands shelf/slope and seamounts), suggesting an inter-connected cycle of recruitment in coastal areas and ontogenetic migration of juveniles from inshore to offshore areas, while eggs and larvae drift in the opposite direction. Juveniles were found to be targeted by three types of fisheries, amounting to cumulative annual catches of ~36 t. Shore angling was the most important fishing method, followed by bait fishing for tuna and the coastal pelagic live-bait fishery. Fishery managers have enforced several measures to protect juveniles, although our results indicate that effective interdiction of juvenile catch would provide a long-term increase of 15 and 8% in spawning-stock biomass and catch, respectively, as well as ~13% increase in the value of landings. Although this measure could improve the protection of a species in an advanced state of overexploitation, our results showed that a decrease in fishing effort would be necessary to achieve sustainability of the stock.