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  • phylogeny  (3)
  • The Netherlands  (2)
  • 2005-2009  (5)
  • 1
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    Multiple gene genealogies and phenotypic characters differentiate several novel species of Mycosphaerella and related anamorphs\non banana (2008)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 20 no. 1, pp. 19-37
    Details
    Publication Date: 2024-01-12
    Description: Three species of Mycosphaerella, namely M. eumusae, M. fijiensis, and M. musicola are involved in the Sigatoka disease complex of bananas. Besides these three primary pathogens, several additional species of Mycosphaerella or their anamorphs have been described from Musa. However, very little is known about these taxa, and for the majority of these species no culture or DNA is available for study. In the present study, we collected a global set of Mycosphaerella strains from banana, and compared them by means of morphology and a multi-gene nucleotide sequence data set. The phylogeny inferred from the ITS region and the combined data set containing partial gene sequences of the actin gene, the small subunit mitochondrial ribosomal DNA and the histone H3 gene revealed a rich diversity of Mycosphaerella species on Musa. Integration of morphological and molecular data sets confirmed more than 20 species of Mycosphaerella (incl. anamorphs) to occur on banana. This study reconfirmed the previously described presence of Cercospora apii, M. citri and M. thailandica, and also identified Mycosphaerella communis, M. lateralis and Passalora loranthi on this host. Moreover, eight new species identified from Musa are described, namely Dissoconium musae, Mycosphaerella mozambica, Pseudocercospora assamensis, P. indonesiana, P. longispora, Stenella musae, S. musicola, and S. queenslandica.
    Keywords: Mycosphaerella ; phylogeny ; Sigatoka disease complex ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 2
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    Re-evaluation of Phytophthora citricola isolates from multiple woody hosts in Europe and North America reveals a new species, Phytophthora plurivora sp. nov (2009)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 22 no. 1, pp. 95-110
    Details
    Publication Date: 2024-01-12
    Description: During large-scale surveys for soilborne Phytophthora species in forests and semi-natural stands and nurseries in Europe during the last decade, homothallic Phytophthora isolates with paragynous antheridia, semipapillate persistent sporangia and a growth optimum around 25 \xc2\xb0C which did not form catenulate hyphal swellings, were recovered from 39 host species in 16 families. Based on their morphological and physiological characters and the similarity of their ITS DNA sequences with P. citricola as designated on GenBank, these isolates were routinely identified as P. citricola. In this study DNA sequence data from the internal transcribed spacer regions (ITS1 and ITS2) and 5.8S gene of the rRNA operon, the mitochondrial cox1 and \xce\xb2-tubulin genes were used in combination with morphological and physiological characteristics to characterise these isolates and compare them to the ex-type and the authentic type isolates of P. citricola, and two other taxa of the P. citricola complex, P. citricola I and the recently described P. multivora. Due to their unique combination of morphological, physiological and molecular characters these semipapillate homothallic isolates are described here as a new species, P. plurivora sp. nov.
    Keywords: Beech ; citricola ; decline ; dieback ; forest ; multivora ; nursery ; oak ; phylogeny
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 3
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    Phytophthora multivora sp. nov., a new species recovered from declining Eucalyptus, Banksia, Agonis and other plant species in Western Australia (2009)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 22 no. 1, pp. 1-13
    Details
    Publication Date: 2024-01-12
    Description: A new Phytophthora species, isolated from rhizosphere soil of declining or dead trees of Eucalyptus gomphocephala, E. marginata, Agonis flexuosa, and another 13 plant species, and from fine roots of E. marginata and collar lesions of Banksia attenuata in Western Australia, is described as Phytophthora multivora sp. nov. It is homothallic and produces semipapillate sporangia, smooth-walled oogonia containing thick-walled oospores, and paragynous antheridia. Although morphologically similar to P. citricola, phylogenetic analyses of the ITS and cox1 gene regions demonstrate that P. multivora is unique. Phytophthora multivora is pathogenic to bark and cambium of E. gomphocephala and E. marginata and is believed to be involved in the decline syndrome of both eucalypt species within the tuart woodland in south-west Western Australia.
    Keywords: Decline ; dieback ; forest ; jarrah ; phylogeny ; Phytophthora citricola ; tuart
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 4
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    Non-indigenous marine and estuarine species in The Netherlands (2005)
    In:  Zoologische Mededelingen vol. 79-1, pp. 1-116
    Details
    Publication Date: 2024-01-12
    Description: An overview is presented of non-indigenous marine and estuarine plant and animal species recorded from The Netherlands. In this list both exotic species from outside NW Europe and non-indigenous species from elsewhere in NW Europe are enumerated. Species that have been suggested to be non-indigenous in The Netherlands but for which insufficient evidence could be found are discussed shortly as well. The list is based mainly on literature data supplemented by own observations of the author. At least 99 plant and animal species have been introduced from elsewhere in the world. Another 13 species have been introduced from other parts of NW Europe. The third category of dubious non-indigenous species enumerates 37 species. The list is preceded by an introduction describing the history of Dutch research on introduced species, the origin of the marine and estuarine flora and fauna of The Netherlands, natural and human-induced dispersal processes, and a summary of the geographic patterns of introduced species.
    Keywords: non-indigenous species ; introduced species ; exotic species ; alien species ; invasive species ; The Netherlands ; North Sea ; Wadden Sea ; Oosterschelde estuary ; estuaries
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
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    Ecological niche models for four native cockroach species (Blattaria: Blattellidae: Ectobiinae) in the Netherlands (2009)
    In:  Contributions to Zoology vol. 78 no. 4, pp. 149-156
    Details
    Publication Date: 2024-01-12
    Description: This paper aims at modelling the spatial distribution of the cockroach species Capraiellus panzeri, Ectobius lapponicus, Ectobius pallidus and Ectobius sylvestris within the Netherlands and comparing the habitat preferences of these species. Maxent was used to calculate habitat suitability and to identify environmental variables underlying the differences in observed distribution patterns. A sub-sampling procedure was employed to test model stability. Models were evaluated by calculating the Area Under the Curve (AUC). The analyses show that except for the costal dune area, the western part of the Netherlands is unsuitable for the species. Suitability predictions for C. panzeri, E. lapponicus and E. sylvestris are very similar, with suitable areas concentrated in the eastern and the north-eastern parts of the country and along the western coast. The prediction model for E. pallidus is somewhat more restricted, especially in the northern part of the country. Soil type, land cover and altitudinal range are most important in predicting the distribution of all species. A correspondence analysis was performed to identify the association between the species distribution and the most influential environmental variables. Correspondence analysis indicated that the species distributions are comparably associated with soil type and land cover while species appear to have different preferences with respect to altitudinal range.
    Keywords: Capraiellus panzeri ; cockroaches ; ecological niche modelling ; Ectobius lapponicus ; Ectobius pallidus ; Ectobius sylvestris ; Maxent ; model stability ; The Netherlands
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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