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  • taxonomy  (6)
  • 2015-2019  (3)
  • 2005-2009  (3)
  • 1
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    Multiple gene genealogies and phenotypic characters differentiate several novel species of Mycosphaerella and related anamorphs\non banana (2008)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 20 no. 1, pp. 19-37
    Details
    Publication Date: 2024-01-12
    Description: Three species of Mycosphaerella, namely M. eumusae, M. fijiensis, and M. musicola are involved in the Sigatoka disease complex of bananas. Besides these three primary pathogens, several additional species of Mycosphaerella or their anamorphs have been described from Musa. However, very little is known about these taxa, and for the majority of these species no culture or DNA is available for study. In the present study, we collected a global set of Mycosphaerella strains from banana, and compared them by means of morphology and a multi-gene nucleotide sequence data set. The phylogeny inferred from the ITS region and the combined data set containing partial gene sequences of the actin gene, the small subunit mitochondrial ribosomal DNA and the histone H3 gene revealed a rich diversity of Mycosphaerella species on Musa. Integration of morphological and molecular data sets confirmed more than 20 species of Mycosphaerella (incl. anamorphs) to occur on banana. This study reconfirmed the previously described presence of Cercospora apii, M. citri and M. thailandica, and also identified Mycosphaerella communis, M. lateralis and Passalora loranthi on this host. Moreover, eight new species identified from Musa are described, namely Dissoconium musae, Mycosphaerella mozambica, Pseudocercospora assamensis, P. indonesiana, P. longispora, Stenella musae, S. musicola, and S. queenslandica.
    Keywords: Mycosphaerella ; phylogeny ; Sigatoka disease complex ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 2
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    Taxonomy, ecology, and conservation status of Philippine Rafflesia\n(Rafflesiaceae) (2009)
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 54 no. 1/3, pp. 77-93
    Details
    Publication Date: 2024-01-12
    Description: The number of Rafflesia species (Rafflesiaceae) reported for the Philippines has grown explosively from two before 2002 to ten or eleven presently. We present an overview of the current knowledge of Philippine Rafflesia by providing a comprehensive account of all the recognized species with their taxonomy, distribution and ecology, plus a key and photographs to aid in identification. Their conservation status and that of the rain forest habitats they require is discussed.
    Keywords: Conservation ; ecology ; Philippines ; Rafflesia ; Rafflesiaceae ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 3
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    Back to the roots: a reappraisal of Neocosmospora (2019)
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 43 no. 1, pp. 90-185
    Details
    Publication Date: 2024-01-12
    Description: The genus Neocosmospora (Fusarium solani species complex) contains saprobes, plant endophytes \nand pathogens of major economic significance as well as opportunistic animal pathogens. Advances in biological \nand phylogenetic species recognition revealed a rich species diversity which has largely remained understudied. \nMost of the currently recognised species lack formal descriptions and Latin names, while the taxonomic utility of old \nnames is hampered by the lack of nomenclatural type specimens. Therefore, to stabilise the taxonomy and nomenclature of these important taxa, we examined type specimens and representative cultures of several old names by \nmeans of morphology and phylogenetic analyses based on rDNA (ITS and LSU), rpb2 and tef1 sequences. Sixtyeight species are accepted in Neocosmospora, 29 of them described herein as new; while 13 new combinations \nare made. Eleven additional phylogenetic species are recognized, but remain as yet undescribed. Lectotypes are \nproposed for eight species, seven species are epitypified and two species are neotypified. Notes on an additional \n17 doubtful or excluded taxa are provided.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Fusarium ; new taxa ; systematics ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 4
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    Generic hyper-diversity in Stachybotriaceae (2016)
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 36, pp. 156-246
    Details
    Publication Date: 2024-03-06
    Description: The family Stachybotriaceae was recently introduced to include the genera Myrothecium, Peethambara and Stachybotrys. Members of this family include important plant and human pathogens, as well as several species used in industrial and commercial applications as biodegraders and biocontrol agents. However, the generic boundaries in Stachybotriaceae are still poorly defined, as type material and sequence data are not readily available for taxonomic studies. To address this issue, we performed multi-locus phylogenetic analyses using partial gene sequences of the 28S large subunit (LSU), the internal transcribed spacer regions and intervening 5.8S nrRNA (ITS), the RNA polymerase II second largest subunit (rpb2), calmodulin (cmdA), translation elongation factor 1-alpha (tef1) and \xce\xb2-tubulin (tub2) for all available type and authentic strains. Supported by morphological characters these data resolved 33 genera in the Stachybotriaceae. These included the nine already established genera Albosynnema, Alfaria, Didymostilbe, Myrothecium, Parasarcopodium, Peethambara, Septomyrothecium, Stachybotrys and Xepicula. At the same time the generic names Melanopsamma, Memnoniella and Virgatospora were resurrected. Phylogenetic inference further showed that both the genera Myrothecium and Stachybotrys are polyphyletic resulting in the introduction of 13 new genera with myrothecium-like morphology and eight new genera with stachybotrys-like morphology.
    Keywords: biodegraders ; generic concept ; human and plant pathogens ; indoor mycobiota ; multi-gene phylogeny ; species concept ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
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    Pectinoidea (Mollusca: Bivalvia) from Iceland (2009)
    In:  Marine Biology Research vol. 5, pp. 207-243
    Details
    Publication Date: 2024-01-12
    Description: The Icelandic pectinoid fauna is reviewed, based on material from the benthic survey programme BIOICE and 17 species are recorded. Similipecten oskarssoni is proposed as a replacement name for Pecten groenlandicus var. minor Locard, 1898 (Propeamussiidae), which is considered a valid species. Lectotypes are designated for Pecten groenlandicus var. minor and Pecten frigidus Jensen, 1904 (Pectinidae). Cyclopecten ambiannulatus Schein, 1989, Parvamussium propinquum (Smith, 1885), Catillopecten eucymatus (Dall, 1898), and Aequipecten opercularis (Linnaeus, 1758) were previously not known from the Icelandic fauna. All species are figured and described and distinguishing characters are discussed. The distribution in Scandinavian and North Atlantic waters is revised based on the collections in SMNH. The low frequency of juvenile specimens of A. opercularis, Mimachlamys varia and Pecten maximus may indicate that Scandinavian populations are the result of very occasional recruitment.
    Keywords: Pectinoidea ; taxonomy ; new species ; North Atlantic ; Iceland ; BIOICE
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 6
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    Mollusc species from the Pontocaspian region \xe2\x80\x93 an expert opinion list (2019)
    In:  ZooKeys vol. 827, pp. 31-124
    Details
    Publication Date: 2024-01-12
    Description: Defining and recording the loss of species diversity is a daunting task, especially if identities of species under threat are not fully resolved. An example is the Pontocaspian biota. The mostly endemic invertebrate faunas that evolved in the Black Sea \xe2\x80\x93 Caspian Sea \xe2\x80\x93 Aral Sea region and live under variable salinity conditions are undergoing strong change, yet within several groups species boundaries are not well established. Collection efforts in the past decade have failed to produce living material of various species groups whose taxonomic status is unclear. This lack of data precludes an integrated taxonomic assessment to clarify species identities and estimate species richness of Pontocaspian biota combining morphological, ecological, genetic, and distribution data. In this paper, we present an expert-working list of Pontocaspian and invasive mollusc species associated to Pontocaspian habitats. This list is based on published and unpublished data on morphology, ecology, anatomy, and molecular biology. It allows us to (1) document Pontocaspian mollusc species, (2) make species richness estimates, and (3) identify and discuss taxonomic uncertainties. The endemic Pontocaspian mollusc species richness is estimated between 55 and 99 species, but there are several groups that may harbour cryptic species. Even though the conservation status of most of the species is not assessed or data deficient, our observations point to deterioration for many of the Pontocaspian species.
    Keywords: Aral Sea ; bivalves ; Black Sea ; Caspian Sea ; conservation ; gastropods ; nomenclature ; taxonomy ; Marie Sk\xc5\x82odowska-Curie Actions ; Action: H2020-MSCA-ITN-2014 ; PRIDE ; Grant agreement no: 642973
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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