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  • Articles  (503)
  • 2015-2019  (503)
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  • Articles  (503)
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  • 11
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    Evaluating the effectiveness of real-time closures for reducing susceptibility of small fish to capture (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: Real-time spatial management in fisheries, a type of dynamic ocean management, uses nearly real-time data collection and dissemination to reduce susceptibility of certain species or age classes to being caught in mixed fisheries. However, as with many fisheries regulations, it is difficult to assess whether such a regulation can produce tangible results on population dynamics. In this study, we take advantage of a rare opportunity in which data regarding real-time closures (RTCs) are available for 1990–2014 alongside annual estimates of fishing mortality for three species (Atlantic cod, haddock, and herring) and catch for four species (all plus saithe) in Icelandic fisheries management. We use time series analyses to assess whether RTCs work as expected and yield a lower susceptibility of small fish to being caught, indicated by lower catch levels and selectivities (as estimated from fishing mortalities) in years with more closures. Results indicate that haddock and herring followed this pattern, but only under conditions of generally high fishing mortality. This study represents the first time evidence has been presented that real-time fishery closures can have a beneficial effect on population dynamics, but also suggests that results differ among species.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 12
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    Automatic Bluefin Tuna sizing using a stereoscopic vision system (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: This article presents a non-invasive fully automatic procedure for Bluefin Tuna sizing, based on a stereoscopic vision system and a deformable model of the fish ventral silhouette. An image processing procedure is performed on each video frame to extract individual fish, followed by a fitting procedure to adjust the fish model to the extracted targets, adapting it to the bending movements of the fish. The proposed system is able to give accurate measurements of tuna snout fork length (SFL) and widths at five predefined silhouette points without manual intervention. In this work, the system is used to study size evolution in adult Atlantic Bluefin Tuna ( Thunnus Thynnus ) over time in a growing farm. The dataset is composed of 12 pairs of videos, which were acquired once a month in 2015, between July and October, in three grow-out cages of tuna aquaculture facilities on the west Mediterranean coast. Each grow out cage contains between 300 and 650 fish on an approximate volume of 20 000 m 3 . Measurements were automatically obtained for the 4 consecutive months after caging and suggest a fattening process: SFL shows an increase of just a few centimetres (2%) while the maximum width ( A1 ) shows a relative increase of more than 20%, mostly in the first 2 months in farm. Moreover, a linear relation (with coefficient of determination R 2 〉 0.98) between SFL and widths for each month is deduced, and a fattening factor ( F ) is introduced. The validity of the measurements is proved by comparing 15 780 SFL measurements, obtained with our automatic system in the last month, versus ground truth data of a high percentage of the stock under study (1143 out of 1579), obtaining no statistically significant difference. This procedure could be extended to other species to assess the size distribution of stocks, as discussed in the article.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 13
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    Seasonal, interannual, and spatial patterns of community composition over the eastern Bering Sea shelf in cold years. Part I: zooplankton (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: Ecosystem structure and function in the eastern Bering Sea are impacted by seasonal, interannual, and spatial variation of the zooplankton community. Zooplankton abundance, community composition and individual responses of key taxa, in spring, summer, and fall were evaluated across ecoregions during three years with high sea-ice, 2008–2010 (cold years). Interannual variations were greatest in spring, but less pronounced compared with intra-annual variations. Intra-annual variations were greatest in the south middle domain in spring and the north middle domain in all seasons. Models using environmental variables were able to explain 69–77% of zooplankton community variation within each season. Among individual taxa, Calanus marshallae/glacialis had delayed stage progression in spring 2009 compared with 2008 and 2010 on the south middle shelf, likely due to late ice retreat and cold temperatures that increased development times. In contrast, stage progression was fastest in summer 2008 likely due to warmer temperatures. Our findings indicate that intra-annual variation of zooplankton community composition, life history stage, and abundance within a cold period may affect the amount of high–lipid zooplankton prey (e.g. Neocalanus and Calanus spp. copepods and euphausiids) available seasonally for forage fish (e.g. age-0 walleye pollock) to grow to a sufficient size (to avoid size-dependent predation) and have sufficient lipid stores (to avoid starvation) to survive the first winter at sea.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 14
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    Seasonal, interannual, and spatial patterns of community composition over the eastern Bering Sea shelf in cold years. Part II: ichthyoplankton and juvenile fish (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: Climate-mediated oceanographic changes have led to protracted periods of above- or below-average water temperatures over the eastern Bering Sea shelf since the early 2000s. Ecosystem components, from phytoplankton to marine birds, have shown dichotomous responses to these temperature stanzas. Understanding within-stanza responses is fundamental to modelling efforts that project ecosystem responses under future climate scenarios. This study describes fish communities associated with Walleye Pollock during the age-0 period and also examines within-stanza homogeneity of assemblages. Spatial patterns of assemblage structure are compared with pre-defined ecoregions and environmental indices are assessed to determine potential mechanisms that delineate species assemblages. Walleye Pollock, rockfishes, Sand Lance, and Northern Rock Sole contributed to spring assemblages in every year. Assemblages were delineated by across-shelf gradients in 2008 and 2010 while 2009 assemblages showed less spatial structure. In summer, the diversity of fish assemblages increased across years but early-stage juvenile Walleye Pollock represented a small portion of the total abundance in 2009. Environmental gradients were related to fish assemblages, but patterns were along-shelf in 2008 and across-shelf in 2010. In fall, late-stage juvenile Walleye Pollock dominated the catch in 2008, but did not typify any assemblage in 2009. Overall, patterns of assemblage structure were not consistent with pre-defined ecoregions. Assemblage structure in 2009 was unique and indicates that within-stanza variability may complicate modelling projections based on ecosystem-level responses to climate changes.
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    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 15
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    Advanced experimental approaches to marine water-column biogeochemical processes (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: This “Food for Thought” article examines the potential uses of several novel scientific and technological developments, which are currently available or being developed, to significantly advance or supplement existing experimental approaches to study water-column biogeochemical processes (WCB-processes). After examining the complementary roles of observation, experiments and numerical models to study WCB-processes, we focus on the main experimental approaches of free-water in situ experiments, and at-sea and on-land meso- and macrocosms. We identify some of the incompletely resolved aspects of marine WCB-processes, and explore advanced experimental approaches that could be used to reduce their uncertainties. We examine three such approaches: free-water experiments of lengthened duration using bioArgo floats and gliders, at-sea mesocosms deployed several 100s m below the sea-surface using new biogeochemical sensors, and 50 m-tall on-land macrocosms. These approaches could lead to significant progress in concepts related to marine WCB-processes.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 16
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    Gaps and challenges of the European network of protected sites in the marine realm (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: The Natura 2000 network forms the cornerstone of the biodiversity conservation strategy of the European Union and is the largest coordinated network of protected areas (PAs) in the world. Here, we demonstrated that the network fails to adequately cover the marine environment and meet the conservation target of 10% set by the Convention on Biological Diversity. The relative percentage of marine surface cover varies significantly among member states. Interestingly, the relative cover of protected seascape was significantly lower for member states with larger exclusive economic zones. Our analyses demonstrated that the vast majority (93%) of the Natura 2000 sites that cover marine waters include both a terrestrial and a marine component. As a result, the majority of the protected surfaces is adjacent to the coastline, and decreases offshore; only 20% of Natura marine PAs is at depths 〉200 m. The lack of systematic planning processes is further reflected by the great variability in the distances among protected sites and the limited number of shared Natura sites among member states. Moreover, 〈40% of the marine sites have management plans, indicating the absence of active, or limited management in most sites. This work highlights the gaps in coverage and spatial design of the European conservation network in the marine environment, and raises questions on the unevenly treatment of marine vs. terrestrial areas.
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    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 17
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    Arctic marine conservation is not prepared for the coming melt (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: As the summer minimum in Arctic sea ice cover reduces in area year by year due to anthropogenic global climate change, so interest grows in the un-tapped oil, gas and fisheries resources that were previously concealed beneath. We show that existing marine protected areas in the Arctic Ocean offer little or no protection to many habitats and deep seafloor features that coincide spatially with areas likely to be of interest to industry. These habitats are globally unique, hosting Arctic species within pristine environments that are currently undergoing rapid adjustment to climate-induced changes in ocean dynamics, species migration and primary production. They are invaluable as reference points for conservation monitoring and assessment. The existing Arctic marine protected area network needs to be expanded in order to protect these habitats and be fully coordinated with other spatial and non-spatial measures intended to protect Arctic habitats and ensure any uses of Arctic marine or subsea resources are sustainable.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 18
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    Population-specific mortality in coho salmon (Oncorhynchus kisutch) released from a purse seine fishery (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: Coastal commercial fisheries targeting Pacific salmon inevitably capture a mix of co-migrating species and genetically distinct populations within each species, only some of which are sufficiently abundant to sustain exploitation. Species-specific release measures are implemented as a conservation measure, but there remains little understanding of the resulting mortality. A purse seine fishery for Pacific salmon in British Columbia, Canada, was simulated with the goal of estimating post-release mortality for coho salmon, a species commonly released from commercial fisheries. Landed coho salmon ( n = 220) were tagged with acoustic transmitters and tracked along their coastal approach and into freshwater. Survival analyses accounting for variable migration pathways among populations revealed population-specific survival, with the population of greatest conservation concern having the best survival. Condition assessments revealed scale loss to be the strongest predictor of success. Physically exhausted fish, identified via reflex impairment tests, also experienced higher mortality. Results highlight the complexity of estimating release mortality in mixed-population commercial fisheries and are discussed in the context of management implications.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
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  • 19
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    Similar oyster reproduction across estuarine regions differing in carbonate chemistry (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: In laboratory studies, shellfish larvae often respond negatively to augmented [CO 2 ], but no prior tests have related wild bivalve larval performance and carbonate chemistry spatiotemporally. The geography of Willapa Bay (Washington, USA) naturally generates two distinct regions of carbonate chemistry where non-native Pacific oysters ( Crassostrea gigas ) dominate the intertidal fauna and successfully reproduce. On the river-influenced east side, pCO 2 is higher and alkalinity lower, which both contribute to reduced aragonite saturation state (Ω aragonite 1.3–1.5) relative to the west side receiving low watershed inputs (Ω aragonite 1.8–1.9). pH sws is also 〉0.1 lower on the east vs. west sides. Despite this difference in field conditions, no biological signal related to carbonate chemistry was apparent in oyster reproduction based on coupled chemical–biological comparisons over three summers. Instead, survival was equal between the two sides of the bay, and settlement was equal or higher on the low-Ω aragonite , low-pH east side. In a temporal comparison of four larval cohorts, settlement differed by two orders of magnitude and increased with water temperature. These field data on oyster reproduction illustrate that population-level effects may not emerge in higher mean [CO 2 ] conditions, with possible decoupling due to local adaptation, spatio-temporal heterogeneity, or higher sensitivity to other axes of environmental variability such as temperature.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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  • 20
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    Clarifying the concept of climate change refugia for coral reefs (2018)
    Oxford University Press
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    Publication Date: 2018-03-06
    Description: Refugia can facilitate the persistence of biodiversity under changing environmental conditions, such as anthropogenic climate change, and therefore constitute the best chance of survival for many coral species in the wild. Despite an increasing amount of literature, the concept of coral reef refugia remains poorly defined; so that climate change refugia have been confused with other phenomena, including temporal refuges, pristine habitats and physiological processes such as adaptation and acclimatization. We propose six criteria that determine the capacity of refugia to facilitate species persistence, including long-term buffering, protection from multiple climatic stressors, accessibility, microclimatic heterogeneity, size, and low exposure to non-climate disturbances. Any effective, high-capacity coral reef refugium should be characterized by long-term buffering of environmental conditions (for several decades) and multi-stressor buffering (provision of suitable environmental conditions with respect to climatic change, particularly ocean warming and acidification). Although not always essential, the remaining criteria are important for quantifying the capacity of potential refugia.
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    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press
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