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  • Elsevier  (1)
  • Frontiers Media  (1)
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  • 1
    Publication Date: 2022-10-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Steen, A. D., Kusch, S., Abdulla, H. A., Cakic, N., Coffinet, S., Dittmar, T., Fulton, J. M., Galy, V., Hinrichs, K., Ingalls, A. E., Koch, B. P., Kujawinski, E., Liu, Z., Osterholz, H., Rush, D., Seidel, M., Sepulveda, J., & Wakeham, S. G. Analytical and computational advances, opportunities, and challenges in marine organic biogeochemistry in an era of "Omics". Frontiers in Marine Science, 7, (2020): 718, doi:10.3389/fmars.2020.00718.
    Description: Advances in sampling tools, analytical methods, and data handling capabilities have been fundamental to the growth of marine organic biogeochemistry over the past four decades. There has always been a strong feedback between analytical advances and scientific advances. However, whereas advances in analytical technology were often the driving force that made possible progress in elucidating the sources and fate of organic matter in the ocean in the first decades of marine organic biogeochemistry, today process-based scientific questions should drive analytical developments. Several paradigm shifts and challenges for the future are related to the intersection between analytical progress and scientific evolution. Untargeted “molecular headhunting” for its own sake is now being subsumed into process-driven targeted investigations that ask new questions and thus require new analytical capabilities. However, there are still major gaps in characterizing the chemical composition and biochemical behavior of macromolecules, as well as in generating reference standards for relevant types of organic matter. Field-based measurements are now routinely complemented by controlled laboratory experiments and in situ rate measurements of key biogeochemical processes. And finally, the multidisciplinary investigations that are becoming more common generate large and diverse datasets, requiring innovative computational tools to integrate often disparate data sets, including better global coverage and mapping. Here, we compile examples of developments in analytical methods that have enabled transformative scientific advances since 2004, and we project some challenges and opportunities in the near future. We believe that addressing these challenges and capitalizing on these opportunities will ensure continued progress in understanding the cycling of organic carbon in the ocean.
    Description: The Hanse-Wissenschaftskolleg Delmenhorst, Germany, sponsored the “Marine Organic Biogeochemistry” workshop in April 2019, of which this working group report was a part. The workshop was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – project number: 422798570. The Geochemical Society provided additional funding for the conference. AS was supported by DOE grant DE-SC0020369.
    Keywords: Chemometrics ; Natural marine organic matter ; FT-ICR-MS ; Analytical challenges ; HR-NMR ; Marine organic biogeochemistry
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2024-02-07
    Description: The Amazon is Earth's largest river by volume output, making it an important source of trace metals and dissolved organic matter (DOM) to the Atlantic Ocean. Despite major recent anthropogenic disruptions to the Amazon catchment area, data for trace metals such as copper (Cu) in the Amazon River estuary and associated mixing plume are still rare. Furthermore, there is currently no existing data in this region for Cu-binding ligands, which govern the amount of bioavailable Cu. To understand trace metal mixing and transport processes, the GEOTRACES process study GApr11 (cruise M147 with RV Meteor) was conducted in 2018 in the Amazon and Pará River estuaries and mixing plume in the tropical North Atlantic Ocean during high river discharge. Size-fractionated surface samples were collected along the full salinity gradient for concentrations of Cu, apparent Cu-binding organic ligands (LCu) and corresponding conditional stability constants (K′CuL, Cu2+cond), electroactive humic substances (eHS), solid phase extractable organic Cu (SPE[sbnd]Cu), dissolved organic carbon (DOC), chlorophyll a (Chl a) and macronutrients. Dissolved (〈0.2 μm) and soluble (〈0.015 μm) Cu correlated negatively with salinity and largely followed values expected from conservative mixing. Cu was primarily in the soluble fraction, with the exception of a minor fraction of large colloidal Cu at low salinity (S ≤ 10). Organic ligands (log K′CuL, Cu2+cond = 12.6–15.6) were present in excess of Cu and likely played a role in solubilizing Cu and preventing Cu being affected by colloidal flocculation. Cu-associated DOM (measured as LCu, eHS and SPE[sbnd]Cu) correlated negatively with salinity and appeared to be primarily governed by river input and mixing with seawater. However, an increase in the colloidal fraction for LCu and eHS observed at S ~ 6–10 was attributed to possible additional autochthonous (phytoplankton) ligand production. In all dissolved samples, organic complexation kept free Cu below levels potentially toxic for phytoplankton (〈1 pmol L−1). Despite increasing anthropogenic activity over the past century, we find Cu concentrations remained similar to the 1970s, suggesting that the large overall river flow may so far minimize the impact of Cu pollution.
    Type: Article , PeerReviewed
    Format: text
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