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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Applied mathematics and mechanics 15 (1994), S. 805-813 
    ISSN: 1573-2754
    Keywords: dynamics ; large deformation ; independent function ; generalized variational principle
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Mathematics , Physics
    Notes: Abstract This paper is based on the geometrical nonlinear theories of deformation presented by Chen Zhi-da, Lagrange's multiplier mothod is used to study the symmetry elasticity problems of large deformation. The general variational principle of potential energy and complementary energy, and the general variation principle of dynamic problem have been proved. In the meantime it is also proved that the general variation principles of potential energy and complementary energy are equivalent.
    Type of Medium: Electronic Resource
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  • 2
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Neural Circuits 7 (2013): 160, doi:10.3389/fncir.2013.00160.
    Description: Here we characterize several new lines of transgenic mice useful for optogenetic analysis of brain circuit function. These mice express optogenetic probes, such as enhanced halorhodopsin or several different versions of channelrhodopsins, behind various neuron-specific promoters. These mice permit photoinhibition or photostimulation both in vitro and in vivo. Our results also reveal the important influence of fluorescent tags on optogenetic probe expression and function in transgenic mice.
    Description: This work was supported by a CRP grant from the National Research Foundation of Singapore and by the World Class Institute (WCI )Program of the National Research Foundation of Korea (NRF )funded by the Ministry of Education, Science and Technology of Korea (MEST) (NRF Grant Number: WCI2009-003).
    Keywords: Optogenetics ; Channelrhodopsin ; Photostimulation ; Photoinhibition ; Cerebellum ; Cortex ; Hippocampus ; Pons
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 3
    Publication Date: 2023-11-06
    Description: The research cruise M187 with the RV METEOR sailed January 25 th to March 4 th 2023 from Walvis Bay to Walvis Bay (Namibia), with a focus on investigating the biogeochemical gradients that exist between the Benguela Upwelling zone and the South Atlantic Subtropical Gyre. In order to achieve this, the two specific foci of the research cruise were to (i) track upwelling filaments as they advect offshore and interact with the subtropical gyre, and (ii) perform a high-resolution transect from upwelling sites to the subtropical gyre. On the research cruise, two filaments were successfully mapped from cold water upwelling sites near or over the Namibian shelf through to warmer waters offshore. This was followed by a transect of twelve stations outwards into the subtropical gyre, reaching a maximum westward position of 5 °W. Sampling stations were conducted to a maximum depth of 1000 m and involved an array of deployments to investigate the biogeochemistry of the water column. Further nutrient addition bioassay experiments were conducted throughout the research cruise to assess the nutrients (co-)limiting to phytoplankton growth. Collectively our research will shed light on key mechanisms establishing the major oceanic biogeochemical gradients between upwelling and subtropical gyre regions, so that they can be included in models used to predict the impacts of climate change.
    Type: Report , NonPeerReviewed
    Format: text
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  • 4
    Publication Date: 2013-06-01
    Description: Background: The yeast Candida is one of the most frequent pathogens isolated from bloodstream infections and is associated with significant morbidity and mortality. Problems with clinical and microbiological diagnosis of invasive candidiasis (IC) have prompted the development of non-culture-based laboratory methods. Previous reports suggest that serological detection of antibodies might be useful for diagnosing systemic candidiasis. Methods: Diagnosis of IC using antibodies against recombinant Candida albicans enolase (Eno) and fructose-bisphosphate aldolase (Fba1) was evaluated. Using recombinant Eno and Fba1 as coating antigens, enzyme-linked immunosorbent assays (ELISAs) were used to analyze sera from patients with candidemia (n = 101), Candida colonization (n = 50), bacteremia (n = 84), invasive aspergillosis (n = 40); and from healthy controls (n = 200). Results: The results demonstrated that ELISA detection of anti-Eno and anti-Fba1 IgG distinguished IC from other pathogenic infections in patients and healthy individuals. The sensitivity, specificity, and positive and negative predictive values were 72.3%, 94.7%, 78.5% and 93% for anti-Eno, and 87.1%, 92.8%, 96.4% and 76.5% for anti-Fba1 antibodies, respectively. Combining these two tests improved sensitivity up to 90.1% and negative predictive value up to 97.1%, with specificity and positive predictive values of 90.6% and 72.2%. The tests were specific to the Candida genus and antibody titers were higher for candidemia patients than for controls. Positive antibody tests were obtained before blood culture results for 42.2% of patients for anti-Eno and 51.1% for anti-Fba1. Conclusion: These data suggest that tests that detect IgG antibodies against Candida enolase and fructose-bisphosphate aldolase, especially when used in combination, could be a powerful tool for diagnosing IC.
    Electronic ISSN: 1471-2334
    Topics: Medicine
    Published by BioMed Central
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  • 5
    Publication Date: 2013-07-23
    Description: Background: Bloodstream infections due to Candida species cause significant morbidity and mortality, and the epidemiology of Candida infection is changing. Surveillance for candidemia is necessary to detect trends in species distribution and antifungal resistance. Methods: The medical and electronic records of all patients who had candidemia at the authors' hospital from 2009 to 2011 were reviewed for demographic data and clinical information, including the infecting Candida species, resistance to antifungals and survival, and the presence of risk factors associated with candidemia. Results: A total of 133 distinct episodes of candidemia were identified over the study period. The annual incidence of candidemia ranged between 0.71 and 0.85 cases/1000 hospital discharges. The most frequent Candida species were C. tropicalis (28.6%), followed by C. albicans (23.3%) and C. parapsilosis (19.5%). The rates of susceptibility to antifungal agents were as followed: voriconazole (97.8%), itraconazole (69.5%), fluconazole (46.1%), ketoconazole (38.9%). Out of 131 evaluable patients, 34 (26.0%) died within 30 days from the onset of candidemia. C. tropicalis candidemia was associated with the highest mortality rate (44.7%). Regarding the crude mortality in the different units, patients in Hemato-Oncology ward had the highest mortality rate (66.7%), followed by patients in cardiovascular wards and ICU (57.1% and 25.6%, respectively). Predictors of 30-day mortality were identified by uni- and multivariate analyses. Complicated abdominal surgery, presence of central venous catheter (CVC), neutropenia, candidemia due to C. tropicalis and poor treatment with fluconazole were significantly associated with the 30-day mortality. Presence of CVC (odds ratio[OR] = 4.177; 95% confidence interval [CI] = 1.698 to 10.278; P = 0.002) was the only independent predictor for mortality in the multivariate analysis. Conclusion: This report provides baseline data for future epidemiological and susceptibility studies and for the mortality rates associated with candidemia in our hospital. The knowledge of the local epidemiological trends in Candida species isolated in blood cultures is important to guide therapeutic choices.
    Electronic ISSN: 1471-2334
    Topics: Medicine
    Published by BioMed Central
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  • 6
    Publication Date: 2023-02-08
    Description: New and compiled geochemical, isotopic and geochronological data allow us to propose a new explanation for Paleogene oceanicmagmatic rocks alongtheIran–Iraqborder.These rocks are represented byathick pile(〉1000 m) ofpillow lavas and pelagic sediments and underlying plutonic rocks. These are sometimes argued to represent a Paleogene ophiolite but there are no associated mantle rocks. Integrated zircon U–Pb ages, bulk rock major and trace element and radiogenic isotope data indicate that these rocks are more likely related to forearc rifting due to extreme extension during Late Paleogene time whichalsotriggeredhigh-fluxmagmatismintheUrumieh–DokhtarMagmaticBeltandexhumationofcorecomplexesinIran. These observations are most consistent with formation of the Paleogene oceanic igneous rocks in a 〉220 km long forearc rift zone.
    Type: Article , PeerReviewed
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  • 7
    Publication Date: 2023-02-08
    Description: Highlights • There are Late Cretaceous granitoids and Paleocene A-type granites in NW Iran. • Different mechanisms are suggested for genesis of granitoids and A-type granites. • Subduction initiation and extension generated granitoids during the Late Cretaceous. Abstract The continental crust of NW Iran is intruded by Late Cretaceous I-type granites and gabbro-diorites as well as Paleocene A-type granites. SIMS and LA-ICPMS U-Pb analyses of zircons yield ages of 100–92 Ma (Late Cretaceous) for I-type granites and gabbro-diorites and 61–63 Ma (Paleocene) for A-type granites. Late Cretaceous gabbro-diorites (including mafic microgranular enclaves; MMEs) from NW Iran show variably evolved signatures. They show depletion in Nb and Ta on N-MORB-normalized trace-element spider-diagrams and have high Th/Yb ratios, suggesting their precursor magmas were generated in a subduction-related environment. Gabbro-diorites have variable zircon εHf(t) values of +1.2 to +8, δ18O of 6.4 to 7.4‰ and bulk rock εNd(t) of −1.4 to ~ +4.9. The geochemical and isotopic data attest to melting of subcontinental lithospheric mantle (SCLM) to generate near-primitive gabbros with radiogenic Nd isotopes (εNd(t) = ~ +4.9) and high Nb/Ta and Zr/Hf ratios, similar to mantle melts (Nb/Ta ~ 17 and Zr/Hf ~ 38). These mafic melts underwent further fractionation and mixing with crustal melts to generate Late Cretaceous evolved gabbro-diorites. Geochemical data for I-type granites indicate both Nb-Ta negative and positive anomalies along with enrichment in light REEs. These rocks are peraluminous and have variable bulk-rock εNd(t) (−1.4 to +1.3), zircon εHf(t) (+2.8 to +10.4) and δ18O (4.7–7.3‰) values, but radiogenic bulk rock Pb isotopes. The geochemical and isotopic signatures of these granites suggest interaction of mantle-derived mafic magmas (similar to near-primitive Oshnavieh gabbros) with middle-upper crust through assimilation-fractional crystallization (AFC) to produce Late Cretaceous I-type granites. Paleocene A-type granites have distinctive geochemical features compared to I-type granitoids, including enrichment in Nb-Ta, high bulk rock εNd(t) (+3.3 to +3.9) and zircon εHf(t) (+5.1 − +9.9) values. Alkaline granites are ferroan; they have low MgO, CaO, Sr, Ba and Eu concentrations and high total Fe2O3, K2O, Na2O, Al2O3, Ga, Zr, Nb-Ta, Th and rare earth element (REE) abundances and Ga/Al ratios. These rocks might be related to fractionation of a melt derived from a sub-continental lithospheric mantle, but which interacted with asthenosphere-derived melts. We suggest that subduction initiation and the resultant slab roll-back caused extreme extension in the overlying Iranian plate, induced convection in the mantle wedge and led to the decompression melting of SCLM. Rising mantle-derived magmas assimilated middle-upper crustal rocks. Fractionating mantle-derived magmas and contamination with crustal components produced evolved gabbro-diorites and I-type granites. In contrast, asthenospheric upwelling during the Paleocene provided heat for melting and interaction with SCLM to generate the precursor melts to the A-type granites.
    Type: Article , PeerReviewed
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  • 8
    Publication Date: 2023-02-08
    Description: Highlights • U-Pb zircon ages define Late Neoproterozoic, Paleozoic and Mesozoic magmatic events in NW Iran. • Late Neoproterozoic magmatism is characterized by highly variable εHf(t) values. • Late Paleozoic magmatic pulses show rift-related geochemical signatures with radiogenic εHf(t) values. New geochronological and geochemical data for Late Neoproterozoic to Mesozoic intrusive rocks from NW Iran define major regional magmatic episodes and track the birth and growth of one of the Cimmerian microcontinents: the Persian block. After the final accretion of the Gondwanan terranes, the subduction of the Prototethyan Ocean beneath NW Gondwana during the Late Neoproterozoic was the trigger for high magmatic fluxes and the emplacement of isotopically diverse arc-related intrusions in NW Gondwana. The Late Neoproterozoic rocks of NW Iran belong to this magmatic event which includes intrusions with highly variable εHf(t) values. This magmatism continued until a magmatic lull during the Ordovician, which led to the erosion of the Neoproterozoic arc, and then was followed by a rifting event which controlled the opening of Paleotethys. In addition, it is supposed that a prolonged pulse of rift magmatism in Persia lasted from Devonian-Carboniferous to Early Permian time. These magmatic events are geographically restricted and are mostly recorded from NW Iran, although there is some evidence for these magmatic events in other segments of Iran. The Jurassic rocks of NW Iran are interpreted to be the along-strike equivalents of a Mesozoic magmatic belt (the Sanandaj-Sirjan Zone; SaSZ) toward the NW. Magmatic rocks from the SaSZ show pulsed magmatism, with high-flux events at both ~176–160 Ma and ~130 Ma. The SaSZ magmatic rocks are suggested to be formed along a continental arc but a rift setting is also considered for the formation of the SaSZ rocks based on the plume-related geochemical signatures. The arc signatures are represented by Nb-Ta depletion in the highly contaminated (by upper continental crust) plutonic rocks whereas the plume-related signature of less-contaminated melts is manifested by enrichment in Nb-Ta and high εHf(t) values, with peaks at +0.6 and +11.2. All these magmatic pulses led to pre-Cimmerian continental growth and reworking during the Late Neoproterozoic, rifting and detachment of the Cimmerian blocks from Gondwana in Mid-Late Paleozoic time and further crustal growth and reworking of Cimmeria during the Mesozoic.
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2023-12-18
    Description: Total alkalinity (TA) is an important variable of the ocean carbonate system. In coastal oceans, carbonate system dynamics are controlled by a range of processes including photosynthesis and respiration, calcification, mixing of water masses, continental inputs, temperature changes, and seasonal upwelling. Assessments of diel, seasonal and interannual variations in TA are required to understand the carbon cycle in coastal oceans. However, our understanding of these variations remains underdeveloped due to limitations in observational techniques. Autonomous TA measurements are therefore required. In this study, an in situ TA analyzer (ISA-TA) based on a single-point titration with spectrophotometric pH detection was deployed in Tong'an Bay, Xiamen, China, over a five-month period in 2021 to determine diel and seasonal TA variations. The TA observations were combined with an artificial neural network (ANN) model to construct TA prediction models for this area. This provided a simple method to investigate TA variations in this region and was applied to predict surface water TA between March and April 2021. The in situ TA observations showed that TA values in Tong'an Bay varied within a range from 1931 to 2294 μmol kg−1 over the study period, with low TA in late winter, early summer and late summer, and high TA in early winter. The TA variations in late summer and early winter were mainly controlled by mixing of water bodies. The diel variations of TA were greatly determined by tides, with a diel amplitude of 9 to 247 μmol kg−1. The ANN model used temperature, salinity, chlorophyll, and dissolved oxygen to estimate TA, with a root-mean-square error (RMSE) of ∼14 μmol kg−1, with salinity as the input variable with the greatest weight. The approach of combining ISA-TA observations with an ANN model can be extended to study the carbonate system in other coastal regions.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2024-02-07
    Description: Most continental arcs are built up over a long time (≥100 myr), and while subduction may be ongoing throughout this interval, magmatism appears to be highly episodic. This episodic behaviour is characterized by high-flux magmatic events but an overall low rate of magmatism. The causes of high-flux magmatic events (“flare-ups”) are enigmatic in many continental arcs. Bulk-rock Sr, Nd, and Pb isotopes, as well as zircon O and Hf isotopes, imply that the mantle and the continental crust can be involved in magmatic flare-ups. However, the relative contributions of mantle vs. crust with changes in eruption rates can differ from arc to arc. The Cenozoic magmatic arcs of Iran, built on mature continental crust, are an excellent candidate for studying the geochemical-isotopic feedback of magmatic pulses to understand the triggers for a flare-up. Our new data constrain the timing of the flare-up in NE Iran to the Early to Middle Eocene (51–43 Ma). This flare-up is characterized by the outpouring of high-K calc-alkalic to shoshonitic magmas at ∼110 ± 8 km3/myr - km. Geochemical modelling using the “Arc Basalt Simulator version 3″ shows that the high-K trachybasalts, moderately to extremely depleted in high-field strength elements, can be derived from the shallower (3.0 GPa; 870 °C) to deeper parts (5.0–5.4 GPa; 965–980 °C) of a subducting slab with ∼1.0 to 5.5 % slab melt flux. Mixing modelling using Sr, Nd, and Pb isotope data indicates that the Torud mafic-intermediate magmatic rocks can be generated by adding ∼ 1% to 〈6% of slab components (50% AOC: 50% sediment) to an Indian MORB-like mantle. Our results suggest that the high magmatic fluxes in NE Iran were instigated mainly by Eocene slab steepening after Paleocene flat-slab subduction, resulting in enhanced upwelling and melting of a volatile-enriched asthenospheric mantle.
    Type: Article , PeerReviewed
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