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  • 1
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: We reported the first attempt to describe mucosa-associated bacterial populations in the chicken ceca by molecular analysis of 16S rRNA genes. Bacteria in the mucosa were highly diverse but mainly Gram-positive with low G+C. Fusobacterium prausnitzii and butyrate-producing bacteria comprised the largest groups among 116 cloned sequences. Twenty five percent of the clones had less than 95% homology to database sequences. Many sequences were related to those of uncultured bacteria identified in human feces or the bovine rumen. Terminal restriction fragment length polymorphism (T-RFLP) analysis revealed some differences between bacterial populations present in the mucosa and lumen of ceca. Greater resolution of bacterial population was obtained using a culture-independent approach rather than a culture-based approach.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Bacterial populations in the ileum of broiler chickens were analyzed by molecular analysis of 16S rRNA genes and compared to those in the cecum. Bacteria found in the ileal mucosa were mainly Gram-positive with low G+C content. There were 15 molecular species among 51 cloned sequences. More than 70% of the cloned sequences were related to lactobacilli and Enterococcus cecorum. Two sequences had 95% or less homology to existing database sequences. Terminal restriction fragment length polymorphism (T-RFLP) analysis revealed differences among bacterial populations present in the mucosa and lumen of the ileum. Comparative studies by T-RFLP and sequence analyses of 16S rRNA genes indicated a less diverse bacterial population in the ileum (mucosa and lumen) than in the cecum. Lactobacilli, E. cecorum, and butyrate-producing bacteria related (including both identified and unidentified species) sequences were the three major groups detected in ilea and ceca. Although butyrate-producing bacteria may have good potential in the development of novel probiotics for poultry, verifying the presence of the bacteria in the chicken gut is required to warrant further investigation.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 2022-05-26
    Description: These data sets collected geophysical data: multi-beam bathymetry, gravity, magnetics, sub-bottom profile to investigate the relationships between faulting, magmatism, and sea level change.
    Description: Gravity, magnetic, and bathymetry data collected along a continuous 1400-km-long spreading-parallel flow line across the Mid-Atlantic Ridge indicate significant tectonic and magmatic fluctuations in the formation of oceanic crust over a range of timescales. The transect spans from 28 Ma on the African Plate to 74 Ma on the North American plate, crossing the Mid-Atlantic Ridge at 35.8 ºN. Gravity-derived crustal thicknesses vary from 3–9 km with a standard deviation of 1 km. Spectral analysis of bathymetry and residual mantle Bouguer anomaly (RMBA) show diffuse power at 〉1 Myr and concurrent peaks at 390, 550, and 950 kyr. Large-scale (〉10-km) mantle thermal and compositional heterogeneities, variations in upper mantle flow, and detachment faulting likely generate the 〉1 Myr diffuse power. The 550- and 950-kyr peaks may reflect the presence of magma solitons and/or regularly spaced ~7.7 and 13.3 km short-wavelength mantle compositional heterogeneities. The 390-kyr spectral peak corresponds to the characteristic spacing of faults along the flow line. Fault spacing also varies over longer periods (〉10 Myr), which we interpret as reflecting long-lived changes in the fraction of tectonically- vs. magmatically- accommodated extensional strain. A newly discovered off-axis oceanic core complex (Kafka Dome) found at 8 Ma on the African plate further suggests extended time periods of tectonically dominated plate separation. Fault spacing negatively correlates with gravity-derived crustal thickness, supporting a strong link between magma input and fault style at mid-ocean ridges.
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 4
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 20, (2019): 6123-6139, doi: 10.1029/2019GC008711.
    Description: Gravity, magnetic, and bathymetry data collected along a continuous 1,400‐km‐long spreading‐parallel flow line across the Mid‐Atlantic Ridge indicate significant tectonic and magmatic fluctuations in the formation of oceanic crust over a range of time scales. The transect spans from 28 Ma on the African Plate to 74 Ma on the North American plate, crossing the Mid‐Atlantic Ridge at 35.8°N. Gravity‐derived crustal thicknesses vary from 3–9 km with a standard deviation of 1.0 km. Spectral analysis of bathymetry and residual mantle Bouguer anomaly show a diffuse power at 〉1 Myr and concurrent peaks at 390, 550, and 950 kyr. Large‐scale (〉10 km) mantle thermal and compositional heterogeneities, variations in upper mantle flow, and detachment faulting likely generate the 〉1 Myr diffuse power. The 550‐ and 950‐kyr peaks may reflect the presence of magma solitons and/or regularly spaced ~7.7 and 13.3 km short‐wavelength mantle compositional heterogeneities. The 390‐kyr spectral peak corresponds to the characteristic spacing of faults along the flow line. Fault spacing also varies over longer periods (〉10 Myr), which we interpret as reflecting long‐lived changes in the fraction of tectonically versus magmatically accommodated extensional strain. A newly discovered off‐axis oceanic core complex (Kafka Dome) found at 8 Ma on the African plate further suggests extended time periods of tectonically‐dominated plate separation. Fault spacing negatively correlates with gravity‐derived crustal thickness, supporting a strong link between magma input and fault style at mid‐ocean ridges.
    Description: Data and supplemental materials are available at the Woods Hole Open Access Server (doi.org/10.26025/1912/24796). We would like to thank the Woods Hole Oceanographic Institution, National Science Foundation, Naval Oceanographic Office, and the captain and crew of R/V Neil Armstrong for making the SCARF cruise possible. We would also like to thank Eboné Pierce for her help during the cruise. We thank Meghan Jones for advice using MBSystem. We also thank Maurice Tivey, John Greene, and Masako Tominaga for advice on processing the magnetic data sets. We would like to thank Peter Huybers for sharing his spectral analysis codes. We would like to thank Rob Sohn for his help on interpreting the spectral analysis. We would like to thank Del Bohnenstiel, Milena Marjanović, one anonymous reviewer, and Editor Thorsten Becker for their very helpful comments that improved this manuscript. Funding was provided for this research by NSF OCE‐14‐58201.
    Description: 2020-05-19
    Keywords: Ocean crustal thickness ; Faulting style ; Mid‐Atlantic Ridge ; Spectral analysis ; Oceanic core complex ; Magma input variation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-10-20
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2021.
    Description: Subduction zones host the greatest earthquakes on earth and pose great threat to human society. The largest slip in megathrust earthquakes often occurs in the 10–50 km depth range, yet seismic imaging of the material properties in this region has proven difficult. This thesis focuses on developing methods to utilize high frequency (2–12 Hz) seismic waves scattered from the megathrust plate interface to constrain its fine-scale velocity structures and to investigate the relationship between velocity structures and megathrust slip behaviors. Chapter 2 investigates the locking condition of the subducted Gorda plate by simulating afterslip that would be expected as a result of the stress changes from offshore strike-slip earthquakes. Chapter 3 develops array analysis methods to identify P-to-S and S-to-P seismic converted phases that convert at the subducted Gorda plate interface from local earthquakes and uses them to constrain the geometry and material properties of the plate boundary fault of the subducted Gorda plate between 5–20 km depth. Chapters 4 and 5 use a dense nodal array and numerical modeling methods to study the seismic guided waves that propagate along the thin low velocity layer at the boundary of the subducted Gorda plate. Taken together, our results indicate that material properties of the subduction plateboundary fault is highly heterogeneous and the plate-boundary fault is potentially contained in a low velocity layer with significant porosity and fluid content at seismogenic depths.
    Description: Funding for this research was provided by National Science Foundation Division of Earth Sciences (EAR) award #1520690 and the WHOI Academic Programs Office.
    Keywords: Subduction zone ; Scattered seismic waves ; Plate boundary
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 6
    Publication Date: 2022-05-26
    Description: The goal of this cruise was to deploy 51 ocean bottom seismometers (OBS) and conduct rock dredges at the Quebrada/Discovery/Gofar (QDG) transform fault systems, with a focus on the Gofar system. QDG is located in the equatorial east Pacific on the East Pacific Rise (Figure 1). Sections of the Gofar and Discovery systems rupture with large (Mw 〉 5.3) earthquakes every 5-6 years, while only one event of this size has occurred on Quebrada in the last 35 years. Variations in along-strike earthquake behavior during these seismic cycles are further constrained by results from a 2008 OBS experiment on QDG. The 2008 experiment revealed the presence of ‘rupture zones’, which fail quasi-periodically in M6 earthquakes, and ‘rupture barriers’, which repeatedly stop large ruptures, yet undergo intense foreshock sequences. The current OBS deployment on Gofar is thus aimed at recording variations in stress build up, stress release, and fault strength within the context of a well-known seismic cycle.
    Description: 2022-03-03
    Repository Name: Woods Hole Open Access Server
    Type: Technical Report
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  • 7
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2021. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Solid Earth 126(2), (2021): e2020JB019962, https://doi.org/10.1029/2020JB019962.
    Description: The largest slip in great megathrust earthquakes often occurs in the 10–30 km depth range, yet seismic imaging of the material properties in this region has proven difficult. We utilize a dense onshore‐offshore passive seismic dataset from the southernmost Cascadia subduction zone where seismicity in the mantle of the subducted Gorda Plate produces S‐to‐P and P‐to‐S conversions generated within a few km of the plate interface. These conversions typically occur in the 10–20 km depth range at either the top or bottom of a ∼5 km thick layer with a high Vp/Vs that we infer to be primarily the subducted crust. We use their arrival times and amplitudes to infer the location of the top and bottom of the subducted crust as well as the velocity contrasts across these discontinuities. Comparing with both the Slab1.0 and the updated Slab2 interface models, the Slab2 model is generally consistent with the converted phases, while the Slab1.0 model is 1–2 km deeper in the 2–20 km depth range and ∼6–8 km too deep in the 10–20 km depth range between 40.25°N and 40.4°N. Comparing the amplitudes of the converted phases to synthetics for simplified velocity structures, the amplitude of the converted phases requires models containing a ∼5 km thick zone with at least a ∼10%–20% reduction in S wave velocity. Thus, the plate boundary is likely contained within or at the top of this low velocity zone, which potentially indicates a significant porosity and fluid content within the seismogenic zone.
    Description: This work is funded by National Science Foundation Award Numbers EAR‐1520690.
    Description: 2021-07-25
    Keywords: Converted phases ; Seismic imaging ; Subduction zone plate boundary
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2016-05-03
    Description: The Journal of Physical Chemistry B DOI: 10.1021/acs.jpcb.6b01844
    Electronic ISSN: 1520-5207
    Topics: Chemistry and Pharmacology , Physics
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