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  • 1
    Publication Date: 2019-10-07
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 2
    Publication Date: 2021-02-17
    Description: Since 2001, hundreds of thousands of hours of underwater acoustic recordings have been made throughout the Southern Ocean south of 60° S. Detailed analysis of the occurrence of marine mammal sounds in these circumpolar recordings could provide novel insights into their ecology, but manual inspection of the entirety of all recordings would be prohibitively time consuming and expensive. Automated signal processing methods have now developed to the point that they can be applied to these data in a cost-effective manner. However training and evaluating the efficacy of these automated signal processing methods still requires a representative annotated library of sounds to identify the true presence and absence of different sound types. This work presents such a library of annotated recordings for the purpose of training and evaluating automated detectors of Antarctic blue and fin whale calls. Creation of the library has focused on the annotation of a representative sample of recordings to ensure that automated algorithms can be developed and tested across a broad range of instruments, locations, environmental conditions, and years. To demonstrate the utility of the library, we characterise the performance of two automated detection algorithms that have been commonly used to detect stereotyped calls of blue and fin whales. The availability of this library will facilitate development of improved detectors for the acoustic presence of Southern Ocean blue and fin whales. It can also be expanded upon to facilitate standardization of subsequent analysis of spatiotemporal trends in call-density of these circumpolar species.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 3
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Malige, F., Patris, J., Buchan, S. J., Stafford, K. M., Shabangu, F., Findlay, K., Hucke-Gaete, R., Neira, S., Clark, C. W., & Glotin, H. Inter-annual decrease in pulse rate and peak frequency of Southeast Pacific blue whale song types. Scientific Reports, 10(1), (2020): 8121, doi:10.1038/s41598-020-64613-0.
    Description: A decrease in the frequency of two southeast Pacific blue whale song types was examined over decades, using acoustic data from several different sources in the eastern Pacific Ocean ranging between the Equator and Chilean Patagonia. The pulse rate of the song units as well as their peak frequency were measured using two different methods (summed auto-correlation and Fourier transform). The sources of error associated with each measurement were assessed. There was a linear decline in both parameters for the more common song type (southeast Pacific song type n.2) between 1997 to 2017. An abbreviated analysis, also showed a frequency decline in the scarcer southeast Pacific song type n.1 between 1970 to 2014, revealing that both song types are declining at similar rates. We discussed the use of measuring both pulse rate and peak frequency to examine the frequency decline. Finally, a comparison of the rates of frequency decline with other song types reported in the literature and a discussion on the reasons of the frequency shift are presented.
    Description: The authors thank the help of Explorasub diving center (Chile), Agrupación turística Chañaral de Aceituno (Chile), ONG Eutropia (Chile), Valparaiso university (Chile), the international institutions and research programs CTBTO, IWC, BRILAM STIC AmSud 17-STIC-01. S.J.B. thanks support from the Center for Oceanographic Research COPAS Sur-Austral, CONICYT PIA PFB31, Biology Department of Woods Hole Oceanographic Institution, the Office of Naval Research Global (awards N62909-16-2214 and N00014-17-2606), and a grant to the Centro de Estudios Avanzados en Zonas Ãridas (CEAZA) “Programa Regional CONICYT R16A10003”. We thank SABIOD MI CNRS, EADM MaDICS CNRS and ANR-18-CE40-0014 SMILES supporting this research. We are grateful to colleagues at DCLDE 2018 and SOLAMAC 2018 conferences for useful comments on the preliminary version of this work. In this work we used only the free and open-source softwares Latex, Audacity and OCTAVE.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
  • 5
    Publication Date: 2022-09-29
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 6
    Publication Date: 2022-09-29
    Description: Blue whales produce regionally-distinct songs. In over a decade since McDonald and colleagues published a summary of biogeographic differences in blue whale songs worldwide, multiple new publications have explored the seasonality and distribution of those songs. We review the spatial and temporal occurrence of previously-defined song types and report several new blue whale song types. At least thirteen songs believed to be produced by blue whales are now known worldwide, five more than reported in the previous review. In the North Pacific Ocean there are three blue whale songs: the well-studied Northeast Pacific song, the Central North Pacific (previously called Northwest and North Pacific) song, and a new song recorded off Hokkaido, Japan. There is spatial overlap of the Northeast Pacific and Central North Pacific songs in the Gulf of Alaska. Similarly, the new song co-occurs with the Central North Pacific song off Hokkaido. Only one blue whale song occurs in the North Atlantic. At least nine songs are present in the Southern Hemisphere. The Antarctic blue whale song is the most widely distributed, occurring in the Southern Ocean as well as seasonally extending into the other oceans of the Southern Hemisphere. The Indian Ocean has the largest variety of blue whale songs, with new data suggesting the Southwest Indian Ocean song should have type locality Madagascar, with Diego Garcia possibly another song-type. Southeast Pacific contains two distinct, co-occurring songs. We report a new song in the South Atlantic, near South Georgia Island, that also occurs seasonally off Ascension Island. Occasionally blue whale songs were recorded outside of their reported range, indicating individuals at times roam more broadly. However, this is not a common occurrence. This new information and finer details of occurrence will enable further development of hypotheses for blue whale population structure based on acoustics.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 7
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Buchan, S. J., Gutierrez, L., Balcazar-Cabrera, N., & Stafford, K. M. Seasonal occurrence of fin whale song off Juan Fernandez, Chile. Endangered Species Research, 39, (2019): 135-145, doi:10.3354/esr00956.
    Description: Fin whales Balaenoptera physalus were the species of baleen whale most widely caught by commercial whaling fleets off the Chilean coast and are globally classified as Endangered. However, very little is known about the present distribution and seasonal movements of fin whales off the coast of Chile. Passive acoustic data collected at the HA03 station of the Preparatory Commission for the Comprehensive Nuclear Test Ban Treaty Organization off the Juan Fernandez Archipelago (JFA) between 2007 and 2016 were analyzed. The temporal occurrence of fin whale song was examined using automatic detection via spectrogram cross-correlation of song notes and by calculating the average acoustic power in the frequency bands of fin whale song. Fin whale song off JFA was composed of regular 17 Hz notes associated with high-frequency components at 85 Hz, with singlet phrasing at a dominant primary inter-note interval of 14.4 s and a secondary interval of 30.8 s. There was a clear seasonal pattern in acoustic presence that was consistent across all years: low or no song during the austral summer and a peak in song occurrence in austral winter. A propagation loss model estimated the detection range at this site to be 186 km. Where the fin whales that are heard off JFA spend the summer months remains an open question. Possible locations include the Western Antarctic Peninsula and/or off northern-central mainland Chile. Further studies should be pursued to better understand the distribution and seasonal movements and to support the conservation of this Endangered species.
    Description: We thank the Preparatory Commission for the Comprehensive Nuclear Test Ban Treaty Organization and the Chilean Commission of Nuclear Energy for proving the data used in this study. S.J.B. and N.B.C. were supported by the Center for Oceanographic Research COPAS Sur-Austral, CONICYT PIA PFB31. S.J.B. was also supported during analysis and writing by the Office of Naval Research Global (awards N62909-16-2214 and N00014-17-2606), and a grant to the Centro de Estudios Avanzados enZonas Áridas (CEAZA) ‘Proyecto CEAZA, 3er Fortalec-imiento de Centros Regionales, Programa Regional CONI-CYT R16A10003’. Our greatest thanks to John Hodgson MSc, Technical Director at Ocean Acoustic Developments and Adrian Brown of the Defence Science and Technology Laboratory (UK) for carrying out the propagation modelling free of charge. Many thanks to Rex Andrew for his help with PSD figure preparation in R. Thanks also go to Nathan Merchant for his kind help with PAMGuide. Many thanks to Michael Pitzrick for his guidance with XBAT. Many thanks to the members of the Southern Ocean Research Partnership Blue and Fin Whale Acoustic Trends Working group for useful discussions that improved the quality of this study.
    Keywords: Fin whale ; Balaenoptera physalus ; Juan Fernandez ; Chile ; Southeast Pacific ; Passive acoustic monitoring
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Buchan, S. J., Perez-Santos, I., Narvaez, D., Castro, L., Stafford, K. M., Baumgartner, M. F., Valle-Levinson, A., Montero, P., Gutierrez, L., Rojas, C., Daneri, G., & Neira, S. Intraseasonal variation in southeast Pacific blue whale acoustic presence, zooplankton backscatter, and oceanographic variables on a feeding ground in Northern Chilean Patagonia. Progress in Oceanography, 199,(2021): 102709, https://doi.org/10.1016/j.pocean.2021.102709.
    Description: Seasonal variation in the acoustic presence of blue whale calls has been widely reported for feeding grounds worldwide, however variation over the submonthly scale (several days to 〈1 month) has been examined to a much lesser extent. This study combines passive acoustic, hydroacoustic, and in situ oceanographic observations collected at a mooring in the Corcovado Gulf, Northern Chilean Patagonia, from January 2016-February 2017, to examine the temporal variation in blue whale acoustic occurrence and prey backscatter over seasonal and submonthly scales. Time series data for a) Southeast Pacific blue whale song calls and D-calls, b) zooplankton backscatter, c) tidal amplitude, and d) meridional and zonal wind stress were examined visually for seasonal trends. To examine submonthly timescales over the summer feeding season (January-June), wavelet transforms and wavelet coherence were applied; generalized linear models (GLM) were also applied. There was a 3-month lag between the seasonal onsets of high zooplankton backscatter (October) and blue whale acoustic presence (January), and an almost immediate drop in blue whale acoustic presence with the seasonal decrease of backscatter (June). This may be due to the use of memory by animals when timing their arrival on the feeding ground, but the timing of their departure may be related to detection of low prey availability. Over the summer feeding season, blue whale acoustic presence was strongly associated with zooplankton backscatter (GLM coefficient p ≪ 0.0001). Song calls followed a seasonal cycle, but D-calls appeared to respond to short term variations in environmental conditions over submonthly scales. Results suggest that spring tides may increase prey aggregation and/or transport into the Corcovado Gulf, leading to increased blue whale acoustic presence over 15-day or 30-day cycles; and short-lived events of increased wind stress with periodicities of 2–8 days and 16–30 days, may also contribute to the aggregation of prey. We discuss the strengths and limitations of coupling passive and active acoustic data to examine drivers of blue whale distribution.
    Description: Financial support was provided by Centro COPAS Sur-Austral ANID AFB170006 and COPAS Coastal FB10021 https://www.anid.cl/, and Office of Naval Research Global and Office of Naval Research grant N00014-17-1-2606.
    Keywords: Blue whales ; Euphausiids ; Passive acoustics ; Active acoustics ; Estuaries ; Backscatter ; Tidal forcing ; Wind stress
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 9
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Schall, E., Di Iorio, L., Berchok, C., Filun, D., Bedrinana-Romano, L., Buchan, S. J., Van Opzeeland, I., Sears, R., & Hucke-Gaete, R. Visual and passive acoustic observations of blue whale trios from two distinct populations. Marine Mammal Science, (2019): 1-10, doi:10.1111/mms.12643.
    Description: Blue whale populations from both hemispheres are thought to undertake annual migrations between high latitude feeding grounds and low latitude breeding grounds (Mackintosh, 1966). For individuals of some populations these predetermined movements to and from wintering areas where calving occurs have been confirmed through photo‐identification, satellite‐tracking, and passive acoustic monitoring (Burtenshaw et al., 2004; Mate, Lagerquist, & Calambokidis, 1999; Sears & Perrin, 2002; Stafford, Nieukirk, & Fox, 1999a). However, for many blue whale populations no clear migratory behavior has been reported and locations of respective breeding grounds remain unclear (e.g., Hucke‐Gaete, Osman, Moreno, Findlay, & Ljungblad, 2004; Samaran et al., 2013; Stafford, Chapp, Bohnenstiel, & Tolstoy, 2011; Thomisch et al., 2016). On feeding grounds in the Gulf of St. Lawrence and along the coast of California, blue whales have been observed to form female–male pairs during summer, which can remain stable up to over several weeks, with the number of pairs increasing towards the end of summer (Sears & Perrin, 2002; Calambokidis, unpublished data;1 RS, unpublished data). These pairs are sometimes joined by a second male, forming a blue whale trio, which often is observed to engage in surface active behaviors lasting several minutes (Sears & Perrin, 2002; RS, unpublished data). The formation of blue whale trios is probably related to reproductive competition between male escorts and female choice (RS, unpublished data). Blue whale males produce population‐specific songs likely functioning as reproductive advertisement (Edds‐Walton, 1997; Oleson et al. 2007a; Stafford, Fox, & Clark, 1998). Several studies have reported song year‐round in low‐, mid‐, and high‐latitude waters, frequently with high song production rates during summer on the feeding grounds (e.g., Barlow et al., 2018; Buchan, Stafford, & Hucke‐Gaete, 2015; Samaran, Adam, & Guinett, 2010; Širović et al., 2004; Stafford, Nieukirk, & Fox, 1999b; Thomisch et al., 2016). Therefore, breeding activities in blue whales may be more opportunistic, i.e., not restricted to the breeding season or to a specific habitat.
    Description: ES thanks Prof. Dr. Per J. Palsbøll for the supervision of the initial Master research project, the Marco Polo fund, and the University Groningen for covering travel expenses. We thank the Melimoyu Ecosystem Research Institute, SNP Patagonia Sur, and the company Teledyne Reson for partially funding the acoustic data collection in southern Chile. RHG is thankful to WWF‐Germany/Chile for partially funding fieldwork through grants to Centro Ballena Azul. CLB thanks the team of the Mingan Island Cetacean Study for their logistical support of boats and lodging, access to the North Atlantic blue whale database, and field assistance; Yvon Bélanger for opening his home to her and RS's field crews; for financial support from the National Science Foundation (Graduate Fellowship), National Defense Industrial Association, American Museum of Natural History (Lerner Gray Fund for Marine Research Grant), Penn State Applied Research Laboratory, and private donors Jeff and Lynn Kraus; and graduate advisors at Penn State University David L. Bradley, Thomas B. Gabrielson, and Diana McCammon. LDI thanks the Croisières du Grand Héron and Center Mériscope for allowing and supporting fieldwork, the Animal Behavior Department of the University of Zurich (Switzerland), the Bioacoustics Research Program at Cornell University (USA) and Prof. M. Manser and C. W. Clark for supervising LDI's Ph.D. The work was supported by grants to LDI for her PhD from the Forschungskommission der Universität Zürich, Züricher Tierschutz, Basler Stiftung für Biologische Forschung, SCNAT, Zangger‐Weber‐Stiftung, SSVA. SJB thanks the Center for Oceanographic Research COPAS Sur‐Austral, CONICYT PIA PFB31, the Office of Naval Research Global (awards N62909‐16‐2214 and N00014‐17‐2606), and a grant to the Centro de Estudios Avanzados en Zonas Áridas from Programa Regional CONICYT R16A10003 for support during manuscript writing. We would like to thank the field crews (F. Viddi, J. Ruiz, A. Carpentier, M. Lessard, A. Liebschner, C. Ramp, S. Angel, K. Aucrenaz, T. Doniol‐Valcroze, J. LeBreus, B. Kot, and J. Puschock) for their immense commitment to blue whale research.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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