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  • 1
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 1999
    In:  Journal of Biosciences Vol. 24, No. S1 ( 1999-3), p. 33-198
    In: Journal of Biosciences, Springer Science and Business Media LLC, Vol. 24, No. S1 ( 1999-3), p. 33-198
    Type of Medium: Online Resource
    ISSN: 0250-5991 , 0973-7138
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 1999
    detail.hit.zdb_id: 2071290-X
    SSG: 12
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  • 2
    In: Biochemical Journal, Portland Press Ltd., Vol. 340, No. 1 ( 1999-05-15), p. 309-320
    Abstract: The seminiferous tubular fluid (STF) provides the microenvironment necessary for spermatogenesis in the adluminal compartment of the seminiferous tubule (ST), primarily through secretions of the Sertoli cell. Earlier studies from this laboratory demonstrated the presence of glutathione S-transferase (GST) in STF collected from adult rat testis and in the spent media of ST cultures. This study describes the cellular source, isoform composition and possible function of GSTs in the STF. The major GST isoforms present in STF in vivo share extensive N-terminal similarity with rat GSTM1 (rGSTM1), rGSTM2, rGSTM3 and rGST-Alpha. Molecular masses of rGSTM2, rGSTM3 and rGST-Alpha from liver and testis sources were similar, unlike STF-GSTM1, which was larger by 325 Da than its liver counterpart. Peptide digest analysis profiles on reverse-phase HPLC between liver and STF isoforms were identical, and N-terminal sequences of selected peptides obtained by digestion of the various isoforms were closely similar. The above results confirmed close structural similarity between liver and STF-GST isoforms. Active synthesis and secretion of GSTs by the STs were evident from recovery of radiolabelled GST from the spent media of ST cultures. Analysis of secreted GST isoforms showed that GST-Alpha was not secreted by the STs in vitro, whereas there was an induction of GST-Pi secretion. Detection of immunostainable GST-Mu in Sertoli cells in vitro and during different stages of the seminiferous epithelium in vivo, coupled with the recovery of radiolabelled GST from Sertoli cell-culture media, provided evidence for Sertoli cells as secretors of GST. In addition, STF of ‘Sertoli cell only’ animals showed no change in the profile of GST isoform secretion, thereby confirming Sertoli cells as prime GST secretors. Non-recovery of [35S]methionine-labelled GSTs from germ cell culture supernatants, but their presence in germ cell lysates, confirm the ability of the germ cells to synthesize, but not to release, GSTs. Functionally, STF-GSTM1 appeared to serve as a steroid-binding protein by its ability to bind to testosterone and oestradiol, two important hormones in the ST that are essential for spermatogenesis, with binding constants of & lt; 9.8×10-7 M for testosterone and 9×10-6 M for oestradiol respectively.
    Type of Medium: Online Resource
    ISSN: 0264-6021 , 1470-8728
    RVK:
    Language: English
    Publisher: Portland Press Ltd.
    Publication Date: 1999
    detail.hit.zdb_id: 1473095-9
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Portland Press Ltd. ; 2018
    In:  Biochemical Journal Vol. 475, No. 19 ( 2018-10-15), p. 3057-3071
    In: Biochemical Journal, Portland Press Ltd., Vol. 475, No. 19 ( 2018-10-15), p. 3057-3071
    Abstract: Proteins belonging to cupin superfamily are known to have critical and diverse physiological functions. However, 7S globulins family, which is also a part of cupin superfamily, were undermined as only seed storage proteins. Structure determination of native protein — Vic_CAPAN from Capsicum annuum — was carried out, and its physiological functions were explored after purifying the protein by ammonium sulfate precipitation followed by size exclusion chromatography. The crystal structure of vicilin determined at 2.16 Å resolution revealed two monomers per asymmetric unit which are juxtaposed orthogonal with each other. Vic_CAPAN consists predominately of β-sheets that folds to form a β-barrel structure commonly called cupin fold. Each monomer of Vic_CAPAN consists of two cupin fold domains, N-terminal and C-terminal, which accommodate two different ligands. A bound ligand was identified at the C-terminal cupin fold in the site presumably conserved for metabolites in the crystal structure. The ligand was confirmed to be salicylic acid through mass spectrometric analysis. A copper-binding site was further observed near the conserved ligand-binding pocket, suggesting possible superoxide dismutase activity of Vic_CAPAN which was subsequently confirmed biochemically. Vicilins from other sources did not exhibit this activity indicating functional specificity of Vic_CAPAN. Discovery of bound salicylic acid, which is a known regulator of antioxidant pathway, and revelation of superoxide dismutase activity suggest that Vic_CAPAN has an important role during oxidative stress. As salicylic acid changes the redox state of cell, it may act as a downstream signal for various pathways involved in plant biotic and abiotic stress rescue.
    Type of Medium: Online Resource
    ISSN: 0264-6021 , 1470-8728
    RVK:
    Language: English
    Publisher: Portland Press Ltd.
    Publication Date: 2018
    detail.hit.zdb_id: 1473095-9
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    Wiley ; 1993
    In:  Proteins: Structure, Function, and Genetics Vol. 16, No. 1 ( 1993-05), p. 48-56
    In: Proteins: Structure, Function, and Genetics, Wiley, Vol. 16, No. 1 ( 1993-05), p. 48-56
    Type of Medium: Online Resource
    ISSN: 0887-3585 , 1097-0134
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 1993
    detail.hit.zdb_id: 1475032-6
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    The Company of Biologists ; 2002
    In:  Journal of Cell Science Vol. 115, No. 10 ( 2002-05-15), p. 2053-2065
    In: Journal of Cell Science, The Company of Biologists, Vol. 115, No. 10 ( 2002-05-15), p. 2053-2065
    Abstract: Glutathione S-transferases (GSTs) are enzymes that detoxify electrophilic compounds. Earlier studies from our laboratory showed that anti-GST antibodies interfered with the fertilising ability of spermatozoa from Capra hircus (goat) in vitro, suggesting that GSTs are localised at the cell surface. In this study, we provide evidence for the presence of GSTs of 24 kDa on the sperm plasma membrane attached by non-covalent interactions. The GST activity associated with the spermatozoal plasma membrane was significantly higher than the activity present in the plasma membranes of brain cells,hepatocytes, spleenocytes and ventriculocytes. Analysis of GST isoforms demonstrates the presence of GST Pi and Mu on the sperm plasma membranes. Both isoforms were able to bind to solubilised as well as intact zona pellucida(ZP) through their N-terminal regions but failed to bind to ZP once the oocytes were fertilised. Solubilised goat ZP separates into three components,one of which, the ZP3-like component, bound to sperm GSTs. High concentrations of anti-GST antibodies or solubilised ZP led to aggregation of sperm GSTs,resulting in the release of acrosin. In contrast, inhibition of sperm GST binding to ZP, by saturation of binding sites for sperm GSTs on the solubilised ZP using peptides designed from the N-terminii of GST Pi or Mu or blocking of binding sites for ZP on sperm GSTs with antibodies raised against the N-terminal GST peptides, inhibited essential prefertilisation changes in sperm. These data therefore demonstrate the strategic location of catalytically active defensive enzymes on the sperm surface that also act as zona-binding proteins. Therefore, sperm-surface GSTs serve as bifunctional molecules in a transcriptionally inactive cell whose requirement for cellular defense and economy of molecules that it can carry is greater than that of any somatic cell type.
    Type of Medium: Online Resource
    ISSN: 1477-9137 , 0021-9533
    Language: English
    Publisher: The Company of Biologists
    Publication Date: 2002
    detail.hit.zdb_id: 219171-4
    detail.hit.zdb_id: 1483099-1
    SSG: 12
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  • 6
    Online Resource
    Online Resource
    International Union of Crystallography (IUCr) ; 2008
    In:  Acta Crystallographica Section F Structural Biology and Crystallization Communications Vol. 64, No. 1 ( 2008-01-01), p. 32-35
    In: Acta Crystallographica Section F Structural Biology and Crystallization Communications, International Union of Crystallography (IUCr), Vol. 64, No. 1 ( 2008-01-01), p. 32-35
    Type of Medium: Online Resource
    ISSN: 1744-3091
    Language: Unknown
    Publisher: International Union of Crystallography (IUCr)
    Publication Date: 2008
    detail.hit.zdb_id: 2175956-X
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  • 7
    Online Resource
    Online Resource
    International Union of Crystallography (IUCr) ; 2014
    In:  Acta Crystallographica Section A Foundations and Advances Vol. 70, No. a1 ( 2014-08-05), p. C258-C258
    In: Acta Crystallographica Section A Foundations and Advances, International Union of Crystallography (IUCr), Vol. 70, No. a1 ( 2014-08-05), p. C258-C258
    Abstract: Although remarkable specificity of the acquired immune system was clearly being demonstrated, degenerate specificity in immune recognition is often been observed. We had started working on degenerate specificity of antibodies using peptide and sugar as a model system. Both carbohydrate antigen (me-α-Man) and peptide (DVFYPYPYASGS) were established to be equivalent in polyclonal as well as in mAb (2D10) responses (1). Thermodynamic analysis of Ag-Ab interactions had suggested the role of conformational flexibility (2) while crystallographic analysis indicated the importance of plasticity in the interactions (3) of the antigen combining site in the manifestation of molecular mimicry. It has been pointed out that even if the potential for flexibility existed, it was not being utilized while recognizing both ligands. So, in order to address this conundrum we started looking for other sugars and peptides that can bind to the mAb 2D10 with comparable affinities. Crystallographic analysis of 2D10 binding to five different sugars (me-α-Glc, α-Lac, α1-3-Mannobiose, α1-6-Mannobiose, α1-3, α1-6-Mannotriose) has given insights underlying the basis of specificity in molecular recognition. Comparison of all the structures has demonstrated that the antigen combining site for sugars is constituted of CDR H3, L1 and L3 only. All five sugars have an overlapping primary binding site (equivalent to me-α-Man interacting region). This primary sugar binding site has been shown to accommodate similar as well as dissimilar sugars by utilizing plasticity in the interacting residues available in the antigen combining site. The reducing sugar of the similar disaccharides (α1-3-Mannobiose, α1-6-Mannobiose) have been adjusted in the same direction but with utilizing different sets of interacting residues of the antibody paratope. However, the reducing sugar of a dissimilar disaccharide (α-Lac) exploits different paratope space altogether. The trisaccharide (α1-3, α1-6-Mannotriose) was accommodated in the same site by utilizing the conformational flexibility in the paratope region (mainly in CDR L1). This study had demonstrated that an affinity matured antibody may utilize at least three different strategies in order to accommodate structurally similar/dissimilar sugars.
    Type of Medium: Online Resource
    ISSN: 2053-2733
    Language: Unknown
    Publisher: International Union of Crystallography (IUCr)
    Publication Date: 2014
    detail.hit.zdb_id: 2020844-3
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  • 8
    Online Resource
    Online Resource
    International Union of Crystallography (IUCr) ; 2015
    In:  Acta Crystallographica Section F Structural Biology Communications Vol. 71, No. 2 ( 2015-02-01), p. 221-225
    In: Acta Crystallographica Section F Structural Biology Communications, International Union of Crystallography (IUCr), Vol. 71, No. 2 ( 2015-02-01), p. 221-225
    Abstract: Solanum melongena (eggplant), a member of the Solanaceae family, is a widely cultivated vegetable crop and is commonly used as a food throughout the world. Allergic reactions caused by members of this family are well known. However, mechanistic analyses to understand their molecular basis have not been adequately explored. In order to address this issue, the 7S vicilin protein (SM80.1) of size 45 kDa was purified from seeds of S. melongena by ammonium sulfate fractionation and size-exclusion chromatography. Significant homology of SM80.1 to an allergy-related protein from S. lycopersicum was identified through a BLAST search. Crystallization attempts with purified protein using the hanging-drop vapour-diffusion method led to hexagonal-shaped crystals. The crystals diffracted to 2.21 Å resolution and belonged to space group P 6 3 22, with unit-cell parameters a = 117.9, c = 123.5 Å.
    Type of Medium: Online Resource
    ISSN: 2053-230X
    Language: Unknown
    Publisher: International Union of Crystallography (IUCr)
    Publication Date: 2015
    detail.hit.zdb_id: 2175956-X
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  • 9
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2016
    In:  Scientific Reports Vol. 6, No. 1 ( 2016-03-23)
    In: Scientific Reports, Springer Science and Business Media LLC, Vol. 6, No. 1 ( 2016-03-23)
    Abstract: Crystal structure of a vicilin, SM80.1, was determined towards exploring its possible physiological functions. The protein was purified from Solanum melongena by combination of ammonium sulphate fractionation and size exclusion chromatography. Structure was determined ab initio at resolution of 1.5 Å by X-ray crystallography showing the three-dimensional topology of the trimeric protein. Each monomer of SM80.1 consists of two similar domains with hydrophobic binding pocket and each accommodating different ligands, i.e. acetate and pyroglutamate. The relatively high stability of these independent anionic ligands in similar pockets indicated a strict requirement of stabilization by hydrogen bonds with the charged residues, suggesting a degree of plasticity within the binding pocket. Comparison of SM80.1 structure with those of other 7S vicilins indicated conservation of putative binding pocket for anionic ligands. Here we propose the possibility of trapping of these ligands in the protein for their requirement in the metabolic processes.
    Type of Medium: Online Resource
    ISSN: 2045-2322
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2016
    detail.hit.zdb_id: 2615211-3
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  • 10
    Online Resource
    Online Resource
    American Chemical Society (ACS) ; 2001
    In:  Biochemistry Vol. 40, No. 40 ( 2001-10-01), p. 12059-12066
    In: Biochemistry, American Chemical Society (ACS), Vol. 40, No. 40 ( 2001-10-01), p. 12059-12066
    Type of Medium: Online Resource
    ISSN: 0006-2960 , 1520-4995
    RVK:
    Language: English
    Publisher: American Chemical Society (ACS)
    Publication Date: 2001
    detail.hit.zdb_id: 1472258-6
    SSG: 12
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