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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 1 (2012): 218–233, doi:10.5670/oceanog.2012.21.
    Description: Chemolithoautotrophic microorganisms are at the nexus of hydrothermal systems by effectively transferring the energy from the geothermal source to the higher trophic levels. While the validity of this conceptual framework is well established at this point, there are still significant gaps in our understanding of the microbiology and biogeochemistry of deep-sea hydrothermal systems. Important questions in this regard are: (1) How much, at what rates, and where in the system is organic carbon being produced? (2) What are the dominant autotrophs, where do they reside, and what is the relative importance of free-swimming, biofilm-forming, and symbiotic microbes? (3) Which metabolic pathways are they using to conserve energy and to fix carbon? (4) How does community-wide gene expression in fluid and biofilm communities compare? and (5) How efficiently is the energy being utilized, transformed into biomass, and transferred to higher trophic levels? In particular, there is currently a notable lack of process-oriented studies that would allow an assessment of the larger role of these ecosystems in global biogeochemical cycles. By combining the presently available powerful "omic" and single-cell tools with thermodynamic modeling, experimental approaches, and new in situ instrumentation to measure rates and concentrations, it is now possible to bring our understanding of these truly fascinating ecosystems to a new level and to place them in a quantitative framework and thus a larger global context.
    Description: This review was written with support from NSF grants OCE-1136727, OCE-1038131, and OCE-1131095 (SMS) and OCE-1136451 (CV). Research mentioned in the review that was carried out in the labs of CV and SMS was supported by NSF grants MCB-0843678 (CV) and OCE-0452333 (SMS).
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-26
    Description: Author Posting. © The Oceanography Society, 2014. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 27, no. 3 (2014): 10-16, doi:10.5670/oceanog.2014.78.
    Description: Anthropogenically driven climate change will rapidly become Earth's dominant transformative influence in the coming decades. The oceanic biological pump—the complex suite of processes that results in the transfer of particulate and dissolved organic carbon from the surface to the deep ocean—constitutes the main mechanism for removing CO2 from the atmosphere and sequestering carbon at depth on submillennium time scales. Variations in the efficacy of the biological pump and the strength of the deep ocean carbon sink, which is larger than all other bioactive carbon reservoirs, regulate Earth's climate and have been implicated in past glacial-​interglacial cycles. The numerous biological, chemical, and physical processes involved in the biological pump are inextricably linked and heterogeneous over a wide range of spatial and temporal scales, and they influence virtually the entire ocean ecosystem. Thus, the functioning of the oceanic biological pump is not only relevant to the modulation of Earth's climate but also constitutes the basis for marine biodiversity and key food resources that support the human population. Our understanding of the biological pump is far from complete. Moreover, how the biological pump and the deep ocean carbon sink will respond to the rapid and ongoing anthropogenic changes to our planet—including warming, acidification, and deoxygenation of ocean waters—remains highly uncertain. To understand and quantify present-day and future changes in biological pump processes requires sustained global observations coupled with extensive modeling studies supported by international scientific coordination and funding.
    Description: We thank the National Science Foundation for support of ocean biogeochemical flux studies, including the US JGOFS program throughout its tenure; OCE 9986766 to S. Honjo; and OCE-0425677, OCE-0851350, and OPP-0909377 to T. Eglinton.
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Location Call Number Limitation Availability
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