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  • Oschlies, Andreas  (2)
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  • 1
    Online Resource
    Online Resource
    Copernicus GmbH ; 2017
    In:  Geoscientific Model Development Vol. 10, No. 1 ( 2017-01-09), p. 127-154
    In: Geoscientific Model Development, Copernicus GmbH, Vol. 10, No. 1 ( 2017-01-09), p. 127-154
    Abstract: Abstract. Global biogeochemical ocean models contain a variety of different biogeochemical components and often much simplified representations of complex dynamical interactions, which are described by many ( ≈ 10 to  ≈ 100) parameters. The values of many of these parameters are empirically difficult to constrain, due to the fact that in the models they represent processes for a range of different groups of organisms at the same time, while even for single species parameter values are often difficult to determine in situ. Therefore, these models are subject to a high level of parametric uncertainty. This may be of consequence for their skill with respect to accurately describing the relevant features of the present ocean, as well as their sensitivity to possible environmental changes. We here present a framework for the calibration of global biogeochemical ocean models on short and long timescales. The framework combines an offline approach for transport of biogeochemical tracers with an estimation of distribution algorithm (Covariance Matrix Adaption Evolution Strategy, CMA-ES). We explore the performance and capability of this framework by five different optimizations of six biogeochemical parameters of a global biogeochemical model, simulated over 3000 years. First, a twin experiment explores the feasibility of this approach. Four optimizations against a climatology of observations of annual mean dissolved nutrients and oxygen determine the extent to which different setups of the optimization influence model fit and parameter estimates. Because the misfit function applied focuses on the large-scale distribution of inorganic biogeochemical tracers, parameters that act on large spatial and temporal scales are determined earliest, and with the least spread. Parameters more closely tied to surface biology, which act on shorter timescales, are more difficult to determine. In particular, the search for optimum zooplankton parameters can benefit from a sound knowledge of maximum and minimum parameter values, leading to a more efficient optimization. It is encouraging that, although the misfit function does not contain any direct information about biogeochemical turnover, the optimized models nevertheless provide a better fit to observed global biogeochemical fluxes.
    Type of Medium: Online Resource
    ISSN: 1991-9603
    Language: English
    Publisher: Copernicus GmbH
    Publication Date: 2017
    detail.hit.zdb_id: 2456725-5
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  • 2
    Online Resource
    Online Resource
    Copernicus GmbH ; 2017
    In:  Geoscientific Model Development Vol. 10, No. 6 ( 2017-06-29), p. 2425-2445
    In: Geoscientific Model Development, Copernicus GmbH, Vol. 10, No. 6 ( 2017-06-29), p. 2425-2445
    Abstract: Abstract. Conventional integration of Earth system and ocean models can accrue considerable computational expenses, particularly for marine biogeochemical applications. Offline numerical schemes in which only the biogeochemical tracers are time stepped and transported using a pre-computed circulation field can substantially reduce the burden and are thus an attractive alternative. One such scheme is the transport matrix method (TMM), which represents tracer transport as a sequence of sparse matrix–vector products that can be performed efficiently on distributed-memory computers. While the TMM has been used for a variety of geochemical and biogeochemical studies, to date the resulting solutions have not been comprehensively assessed against their online counterparts. Here, we present a detailed comparison of the two. It is based on simulations of the state-of-the-art biogeochemical sub-model embedded within the widely used coarse-resolution University of Victoria Earth System Climate Model (UVic ESCM). The default, non-linear advection scheme was first replaced with a linear, third-order upwind-biased advection scheme to satisfy the linearity requirement of the TMM. Transport matrices were extracted from an equilibrium run of the physical model and subsequently used to integrate the biogeochemical model offline to equilibrium. The identical biogeochemical model was also run online. Our simulations show that offline integration introduces some bias to biogeochemical quantities through the omission of the polar filtering used in UVic ESCM and in the offline application of time-dependent forcing fields, with high latitudes showing the largest differences with respect to the online model. Differences in other regions and in the seasonality of nutrients and phytoplankton distributions are found to be relatively minor, giving confidence that the TMM is a reliable tool for offline integration of complex biogeochemical models. Moreover, while UVic ESCM is a serial code, the TMM can be run on a parallel machine with no change to the underlying biogeochemical code, thus providing orders of magnitude speed-up over the online model.
    Type of Medium: Online Resource
    ISSN: 1991-9603
    Language: English
    Publisher: Copernicus GmbH
    Publication Date: 2017
    detail.hit.zdb_id: 2456725-5
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
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